RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 IGHV3-73A0A0B4J1V6 119 aa12.13□□□□□ -0.47
LIMS2-208ENST00000410011 A0A1B0GV72 72 aa12.13□□□□□ -0.47
LIMS2-208ENST00000410011 SLC25A20O43772 301 aa12.13□□□□□ -0.47
LIMS2-208ENST00000410011 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
LIMS2-208ENST00000410011 IGHV4-31P0DP07 118 aa12.12□□□□□ -0.47
LIMS2-208ENST00000410011 HTN1P15515 57 aa12.12□□□□□ -0.47
LIMS2-208ENST00000410011 C4orf3Q8WVX3 66 aa12.12□□□□□ -0.47
LIMS2-208ENST00000410011 Q6ZSN1 163 aa12.12□□□□□ -0.47
LIMS2-208ENST00000410011 TMEM61Q8N0U2 210 aa12.12□□□□□ -0.47
LIMS2-208ENST00000410011 ANKRD29Q8N6D5 301 aa12.12□□□□□ -0.47
LIMS2-208ENST00000410011 COL12A1Q99715 3063 aa12.12□□□□□ -0.47
LIMS2-208ENST00000410011 TIMM17BO60830 172 aa12.11□□□□□ -0.47
LIMS2-208ENST00000410011 ATXN8Q156A1 80 aa12.11□□□□□ -0.47
LIMS2-208ENST00000410011 BEX4Q9NWD9 120 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-208ENST00000410011 NDUFA12Q9UI09 145 aa12.11□□□□□ -0.47
LIMS2-208ENST00000410011 SORL1Q92673 2214 aa12.11□□□□□ -0.47
LIMS2-208ENST00000410011 RS1O15537 224 aa12.11□□□□□ -0.47
LIMS2-208ENST00000410011 FHL3Q13643 280 aa12.11□□□□□ -0.47
LIMS2-208ENST00000410011 MAP6D1Q9H9H5 199 aa12.11□□□□□ -0.47
LIMS2-208ENST00000410011 PKD1L2Q7Z442 2459 aa12.11□□□□□ -0.47
LIMS2-208ENST00000410011 TIRAPP58753 221 aa12.1□□□□□ -0.47
LIMS2-208ENST00000410011 CEMP1Q6PRD7 247 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-208ENST00000410011 IGLV5-45A0A087WSX0 123 aa12.1□□□□□ -0.47
LIMS2-208ENST00000410011 TRAV8-3A0A0A6YYJ7 113 aa12.1□□□□□ -0.47
LIMS2-208ENST00000410011 ZFAND6Q6FIF0 208 aa12.1□□□□□ -0.47
LIMS2-208ENST00000410011 C18orf65Q6ZTR6 163 aa12.1□□□□□ -0.47
LIMS2-208ENST00000410011 Q6ZUT4 128 aa12.1□□□□□ -0.47
LIMS2-208ENST00000410011 C9JAW5 83 aa12.09□□□□□ -0.47
LIMS2-208ENST00000410011 MIAQ16674 131 aa12.09□□□□□ -0.47
LIMS2-208ENST00000410011 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
LIMS2-208ENST00000410011 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
LIMS2-208ENST00000410011 DEFB114Q30KQ6 69 aa12.09□□□□□ -0.47
LIMS2-208ENST00000410011 MAPK1IP1LQ8NDC0 245 aa12.09□□□□□ -0.47
LIMS2-208ENST00000410011 LINC01587Q99440 93 aa12.09□□□□□ -0.47
LIMS2-208ENST00000410011 Q9UF83 564 aa12.09□□□□□ -0.47
LIMS2-208ENST00000410011 INSP01308 110 aa12.08□□□□□ -0.48
LIMS2-208ENST00000410011 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
LIMS2-208ENST00000410011 IFITM1P13164 125 aa12.08□□□□□ -0.48
LIMS2-208ENST00000410011 YAE1D1Q9NRH1 226 aa12.08□□□□□ -0.48
LIMS2-208ENST00000410011 LINC01620Q4KN68 170 aa12.08□□□□□ -0.48
LIMS2-208ENST00000410011 ADAMTSL4-AS1Q5T5F5 129 aa12.08□□□□□ -0.48
LIMS2-208ENST00000410011 PRM2P04554 102 aa12.06□□□□□ -0.48
LIMS2-208ENST00000410011 XGP55808 180 aa12.06□□□□□ -0.48
LIMS2-208ENST00000410011 Q1RN00 199 aa12.06□□□□□ -0.48
LIMS2-208ENST00000410011 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
LIMS2-208ENST00000410011 PRSS2P07478 247 aa12.06□□□□□ -0.48
LIMS2-208ENST00000410011 DYNLRB2Q8TF09 96 aa12.06□□□□□ -0.48
LIMS2-208ENST00000410011 GEMIN7Q9H840 131 aaKnown RBP12.06□□□□□ -0.48
LIMS2-208ENST00000410011 PRRC2AP48634 2157 aaKnown RBP12.06□□□□□ -0.48
LIMS2-208ENST00000410011 CELSR2Q9HCU4 2923 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.05□□□□□ -0.48
LIMS2-208ENST00000410011 TRAV25A0A0B4J276 109 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 TRBV10-2A0A0K0K1G8 114 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 IGKV2-29A2NJV5 120 aaPredicted RBP12.05□□□□□ -0.48
LIMS2-208ENST00000410011 TRIAP1O43715 76 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 MT-ATP8P03928 68 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 RPL13AP40429 203 aaKnown RBP12.05□□□□□ -0.48
LIMS2-208ENST00000410011 FAM19A3Q7Z5A8 133 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 H7C2G1 150 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 CKS1BP61024 79 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 RNASE13Q5GAN3 156 aaKnown RBP12.05□□□□□ -0.48
LIMS2-208ENST00000410011 LRRC75A-AS1Q8N1F1 130 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 CFAP46Q8IYW2 2715 aa12.05□□□□□ -0.48
LIMS2-208ENST00000410011 USP9XQ93008 2570 aaPredicted RBP12.05□□□□□ -0.48
LIMS2-208ENST00000410011 NDUFA1O15239 70 aa12.04□□□□□ -0.48
LIMS2-208ENST00000410011 COX6CP09669 75 aa12.04□□□□□ -0.48
LIMS2-208ENST00000410011 IL17DQ8TAD2 202 aa12.04□□□□□ -0.48
LIMS2-208ENST00000410011 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
LIMS2-208ENST00000410011 ICOSQ9Y6W8 199 aa12.04□□□□□ -0.48
LIMS2-208ENST00000410011 TMEM86BQ8N661 226 aa12.03□□□□□ -0.48
LIMS2-208ENST00000410011 CREBBPQ92793 2442 aa12.03□□□□□ -0.48
LIMS2-208ENST00000410011 CDKN2A-AS1Q9UH64 79 aa12.02□□□□□ -0.49
LIMS2-208ENST00000410011 IGLV5-39A0A0G2JS06 123 aa12.02□□□□□ -0.49
LIMS2-208ENST00000410011 HERVK_113P63121 156 aa12.02□□□□□ -0.49
LIMS2-208ENST00000410011 TMEM101Q96IK0 257 aa12.02□□□□□ -0.49
LIMS2-208ENST00000410011 TRBV10-1A0A0K0K1A3 114 aa12.01□□□□□ -0.49
LIMS2-208ENST00000410011 CR1P17927 2039 aa12.01□□□□□ -0.49
LIMS2-208ENST00000410011 IGHV3-38A0A0C4DH36 116 aa12□□□□□ -0.49
LIMS2-208ENST00000410011 A8MZ25 164 aa12□□□□□ -0.49
LIMS2-208ENST00000410011 H3BT86 120 aa12□□□□□ -0.49
LIMS2-208ENST00000410011 CIRBPQ14011 172 aaKnown RBP12□□□□□ -0.49
LIMS2-208ENST00000410011 DEFB113Q30KQ7 82 aa12□□□□□ -0.49
LIMS2-208ENST00000410011 DGAT2L7PQ6IED9 249 aa12□□□□□ -0.49
LIMS2-208ENST00000410011 USP9YO00507 2555 aaPredicted RBP11.99□□□□□ -0.49
LIMS2-208ENST00000410011 IGHV3OR16-12A0A075B7B8 117 aa11.99□□□□□ -0.49
LIMS2-208ENST00000410011 ODF3L2Q3SX64 289 aa11.99□□□□□ -0.49
LIMS2-208ENST00000410011 NTN5Q8WTR8 489 aaPredicted RBP11.99□□□□□ -0.49
LIMS2-208ENST00000410011 CRYBG3Q68DQ2 2970 aa11.99□□□□□ -0.49
LIMS2-208ENST00000410011 C1orf158Q8N1D5 194 aa11.99□□□□□ -0.49
LIMS2-208ENST00000410011 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.99□□□□□ -0.49
LIMS2-208ENST00000410011 FLNCQ14315 2725 aa11.99□□□□□ -0.49
LIMS2-208ENST00000410011 DAZ2Q13117 558 aaKnown RBP11.98□□□□□ -0.49
LIMS2-208ENST00000410011 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
LIMS2-208ENST00000410011 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
LIMS2-208ENST00000410011 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
LIMS2-208ENST00000410011 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
LIMS2-208ENST00000410011 MAP1AP78559 2803 aaPredicted RBP11.98□□□□□ -0.49
LIMS2-208ENST00000410011 CACNA1AO00555 2505 aa11.97□□□□□ -0.49
LIMS2-208ENST00000410011 LST1O00453 97 aa11.97□□□□□ -0.49
LIMS2-208ENST00000410011 STHQ8IWL8 128 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms