RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 TSHBP01222 138 aa12.37□□□□□ -0.43
GCFC2-202ENST00000409857 FAM19A4Q96LR4 140 aa12.36□□□□□ -0.43
GCFC2-202ENST00000409857 MRPL16Q9NX20 251 aaKnown RBP12.36□□□□□ -0.43
GCFC2-202ENST00000409857 LINC01549A6NIU2 74 aa12.36□□□□□ -0.43
GCFC2-202ENST00000409857 C11orf86A6NJI1 115 aa12.35□□□□□ -0.43
GCFC2-202ENST00000409857 RPL39P62891 51 aaKnown RBP12.35□□□□□ -0.43
GCFC2-202ENST00000409857 A6NJY4 79 aa12.35□□□□□ -0.43
GCFC2-202ENST00000409857 LINC00315P59091 139 aa12.35□□□□□ -0.43
GCFC2-202ENST00000409857 SRSF9Q13242 221 aaKnown RBP eCLIP12.35□□□□□ -0.439e-7■■□□□ 12.4
GCFC2-202ENST00000409857 DCANP1Q8TF63 244 aa12.35□□□□□ -0.43
GCFC2-202ENST00000409857 TP53TG1Q9Y2A0 90 aa12.35□□□□□ -0.43
GCFC2-202ENST00000409857 A0A087WWL8 130 aa12.34□□□□□ -0.43
GCFC2-202ENST00000409857 DNAH3Q8TD57 4116 aa12.34□□□□□ -0.43
GCFC2-202ENST00000409857 IGLV4-69A0A075B6H9 119 aa12.34□□□□□ -0.43
GCFC2-202ENST00000409857 K7EQG2 157 aa12.34□□□□□ -0.43
GCFC2-202ENST00000409857 FAM110AQ9BQ89 295 aa12.34□□□□□ -0.43
GCFC2-202ENST00000409857 KIF25-AS1Q9Y6Z4 181 aa12.34□□□□□ -0.43
GCFC2-202ENST00000409857 NBEAL1Q6ZS30 2694 aa12.33□□□□□ -0.43
GCFC2-202ENST00000409857 J3QR89 54 aa12.33□□□□□ -0.44
GCFC2-202ENST00000409857 CMC4P56277 68 aaPredicted RBP12.33□□□□□ -0.44
GCFC2-202ENST00000409857 ZFP2Q6ZN57 461 aa12.33□□□□□ -0.44
GCFC2-202ENST00000409857 APOMO95445 188 aa12.33□□□□□ -0.44
GCFC2-202ENST00000409857 SMCPP49901 116 aaPredicted RBP12.33□□□□□ -0.44
GCFC2-202ENST00000409857 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
GCFC2-202ENST00000409857 LOC107984156A0A0G2JMH3 177 aa12.32□□□□□ -0.44
GCFC2-202ENST00000409857 ARL17AQ8IVW1 177 aa12.32□□□□□ -0.44
GCFC2-202ENST00000409857 TSPAN13O95857 204 aa12.32□□□□□ -0.44
GCFC2-202ENST00000409857 SUMO4Q6EEV6 95 aa12.32□□□□□ -0.44
GCFC2-202ENST00000409857 IGIPA6NJ69 53 aa12.31□□□□□ -0.44
GCFC2-202ENST00000409857 MED14OSP0DP75 135 aa12.31□□□□□ -0.44
GCFC2-202ENST00000409857 UBE2D1P51668 147 aa12.31□□□□□ -0.44
GCFC2-202ENST00000409857 TSPEAR-AS2P59090 65 aa12.31□□□□□ -0.44
GCFC2-202ENST00000409857 APRG1Q8IVJ8 170 aa12.31□□□□□ -0.44
GCFC2-202ENST00000409857 NOTCH1P46531 2555 aa12.31□□□□□ -0.44
GCFC2-202ENST00000409857 PSMB2P49721 201 aa12.31□□□□□ -0.44
GCFC2-202ENST00000409857 F5H697 171 aa12.3□□□□□ -0.44
GCFC2-202ENST00000409857 POM121L12Q8N7R1 296 aa12.3□□□□□ -0.44
GCFC2-202ENST00000409857 TRAV12-3A0A0B4J271 114 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 A0A0J9YY99 117 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 CD7P09564 240 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 ID1P41134 155 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 POLR2KP53803 58 aaKnown RBP12.29□□□□□ -0.44
GCFC2-202ENST00000409857 CFAP126Q5VTH2 177 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 Q8N1Y9 231 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 PTH2Q96A98 100 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 C19orf73Q9NVV2 129 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 NXPH4O95158 308 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 SNRPD3P62318 126 aaKnown RBP12.29□□□□□ -0.44
GCFC2-202ENST00000409857 FAM159AQ6UWV7 190 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 NFE4Q86UQ8 179 aa12.29□□□□□ -0.44
GCFC2-202ENST00000409857 PPP1R17O96001 155 aa12.28□□□□□ -0.44
GCFC2-202ENST00000409857 PMVKQ15126 192 aa12.28□□□□□ -0.44
GCFC2-202ENST00000409857 ODF3L2Q3SX64 289 aa12.28□□□□□ -0.44
GCFC2-202ENST00000409857 TMEM170BQ5T4T1 132 aa12.28□□□□□ -0.44
GCFC2-202ENST00000409857 FAM74A4Q5TZK3 123 aa12.28□□□□□ -0.44
GCFC2-202ENST00000409857 ZNRF2Q8NHG8 242 aa12.28□□□□□ -0.44
GCFC2-202ENST00000409857 MAP6D1Q9H9H5 199 aa12.28□□□□□ -0.44
GCFC2-202ENST00000409857 SDHAF1A6NFY7 115 aa12.27□□□□□ -0.45
GCFC2-202ENST00000409857 KLLNB2CW77 178 aa12.27□□□□□ -0.45
GCFC2-202ENST00000409857 OPRPNQ99935 248 aaPredicted RBP12.27□□□□□ -0.45
GCFC2-202ENST00000409857 GEMIN7Q9H840 131 aaKnown RBP12.27□□□□□ -0.45
GCFC2-202ENST00000409857 IGKV3-20P01619 116 aa12.27□□□□□ -0.45
GCFC2-202ENST00000409857 FOXI1Q12951 378 aa12.27□□□□□ -0.45
GCFC2-202ENST00000409857 KIR2DL4Q99706 377 aa12.26□□□□□ -0.45
GCFC2-202ENST00000409857 C1QTNF4Q9BXJ3 329 aa12.26□□□□□ -0.45
GCFC2-202ENST00000409857 TRAV12-2A0A075B6T6 113 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 A8MZ25 164 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 VCYO14598 125 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 ZNF688P0C7X2 276 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 UBE2D3P61077 147 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 HERVK_113P61574 105 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 UBE2D2P62837 147 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 CFC1BP0CG36 223 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 CFC1P0CG37 223 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 SYT8Q8NBV8 401 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 MDFICQ9P1T7 246 aa12.25□□□□□ -0.45
GCFC2-202ENST00000409857 IGHV3-30P01768 117 aa12.24□□□□□ -0.45
GCFC2-202ENST00000409857 IGHV3-30-5P0DP03 117 aa12.24□□□□□ -0.45
GCFC2-202ENST00000409857 DEFB131AP59861 70 aa12.24□□□□□ -0.45
GCFC2-202ENST00000409857 K7EIL1 84 aa12.24□□□□□ -0.45
GCFC2-202ENST00000409857 TCL1BO95988 128 aa12.24□□□□□ -0.45
GCFC2-202ENST00000409857 TRBV7-9A0A0J9YWB2 115 aa12.23□□□□□ -0.45
GCFC2-202ENST00000409857 AMELXQ99217 191 aa12.23□□□□□ -0.45
GCFC2-202ENST00000409857 RPL32P62910 135 aaKnown RBP12.22□□□□□ -0.45
GCFC2-202ENST00000409857 ZNF876PQ49A33 203 aa12.22□□□□□ -0.45
GCFC2-202ENST00000409857 TMEM141Q96I45 108 aa12.22□□□□□ -0.45
GCFC2-202ENST00000409857 IGHV3-64A0A075B6Q5 118 aa12.22□□□□□ -0.45
GCFC2-202ENST00000409857 PRB2P02812 416 aaPredicted RBP12.22□□□□□ -0.45
GCFC2-202ENST00000409857 PAPPA-AS1Q5QFB9 102 aa12.22□□□□□ -0.45
GCFC2-202ENST00000409857 SLC25A29Q8N8R3 303 aa12.22□□□□□ -0.45
GCFC2-202ENST00000409857 TIMM17AQ99595 171 aa12.22□□□□□ -0.45
GCFC2-202ENST00000409857 CDIP1Q9H305 208 aa12.22□□□□□ -0.45
GCFC2-202ENST00000409857 TRBV27A0A0K0K1C4 114 aa12.21□□□□□ -0.45
GCFC2-202ENST00000409857 ZNF56Q15929 161 aa12.21□□□□□ -0.45
GCFC2-202ENST00000409857 CARD19Q96LW7 228 aa12.21□□□□□ -0.45
GCFC2-202ENST00000409857 WFDC10AQ9H1F0 79 aa12.21□□□□□ -0.45
GCFC2-202ENST00000409857 J3QQQ9 107 aa12.2□□□□□ -0.46
GCFC2-202ENST00000409857 IGHV4-30-4P0DP06 118 aa12.2□□□□□ -0.46
GCFC2-202ENST00000409857 IGHV3-16A0A0C4DH30 117 aa12.2□□□□□ -0.46
GCFC2-202ENST00000409857 M0QY20 66 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms