RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 ADAMTSL4-AS1Q5T5F5 129 aa2.29□□□□□ -2.04
CUL3-204ENST00000409777 NTN5Q8WTR8 489 aaPredicted RBP2.29□□□□□ -2.04
CUL3-204ENST00000409777 UBE2WQ96B02 151 aa2.29□□□□□ -2.04
CUL3-204ENST00000409777 VSIG2Q96IQ7 327 aa2.29□□□□□ -2.04
CUL3-204ENST00000409777 CHCHD7Q9BUK0 85 aa2.29□□□□□ -2.04
CUL3-204ENST00000409777 JPT2Q9H910 190 aa2.29□□□□□ -2.04
CUL3-204ENST00000409777 GAGE2DQ9UEU5 116 aa2.29□□□□□ -2.04
CUL3-204ENST00000409777 TEX49A0A1B0GTD5 131 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 NDUFA1O15239 70 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 FAM222AQ5U5X8 452 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 DAZ1Q9NQZ3 744 aaKnown RBP2.28□□□□□ -2.04
CUL3-204ENST00000409777 NACAE9PAV3 2078 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 ZNF292O60281 2723 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 TRAV8-4A0A0B4J246 113 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 F6UB75 175 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 J3QKU1 62 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 K7EQG2 157 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 S100A4P26447 101 aaKnown RBP2.28□□□□□ -2.04
CUL3-204ENST00000409777 DEFB1P60022 68 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 C5orf38Q86SI9 138 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 OBSCN-AS1Q96MR7 158 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 RHPN1-AS1Q9BWJ2 59 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 UBE2D4Q9Y2X8 147 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 IGHV1OR15-1A0A075B7D0 117 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 IGHV3OR16-13A0A075B7E8 117 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 IGHV3-49A0A0A0MS15 119 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 IGHV3-74A0A0B4J1X5 117 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 TRAV2A0A0B4J234 112 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 A0A0J9YXV3 536 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 SNCGO76070 127 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 ATP5G1P05496 136 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 CXCL5P42830 114 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 ZNF415Q09FC8 603 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 FAM159AQ6UWV7 190 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 C2orf82Q6UX34 121 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 C15orf53Q8NAA6 179 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 IL17DQ8TAD2 202 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 OPRPNQ99935 248 aaPredicted RBP2.28□□□□□ -2.04
CUL3-204ENST00000409777 TMEM126AQ9H061 195 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 SS18L2Q9UHA2 77 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 TNFRSF18Q9Y5U5 241 aa2.28□□□□□ -2.04
CUL3-204ENST00000409777 TRACP01848 142 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 PSMB8P28062 276 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 ID1P41134 155 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 EMP1P54849 157 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 DAND5Q8N907 189 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 DNAJC30Q96LL9 226 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 MUC3AQ02505 3323 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 ABCA2Q9BZC7 2435 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 RBMY1A1P0DJD3 496 aaKnown RBP2.27□□□□□ -2.05
CUL3-204ENST00000409777 RBMY1CP0DJD4 496 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 RBMY1FQ15415 496 aaKnown RBP2.27□□□□□ -2.05
CUL3-204ENST00000409777 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 SFTA2Q6UW10 78 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 SMCR5Q8TEV8 140 aa2.27□□□□□ -2.05
CUL3-204ENST00000409777 ZNF625Q96I27 306 aaPredicted RBP2.27□□□□□ -2.05
CUL3-204ENST00000409777 CSDC2Q9Y534 153 aaKnown RBP2.27□□□□□ -2.05
CUL3-204ENST00000409777 COX7A2LO14548 114 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 C2orf48Q96LS8 159 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 NDUFA12Q9UI09 145 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 AKAP13Q12802 2813 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 OTOGLQ3ZCN5 2332 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 TRAV12-3A0A0B4J271 114 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 F5H768 121 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 LINC00643Q86TS7 51 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.26□□□□□ -2.05
CUL3-204ENST00000409777 C11orf72Q8NBR9 251 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 A0A1B0GX51 115 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 RS1O15537 224 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 IGHV3-53P01767 116 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 TTC32Q5I0X7 151 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 LINC00308Q8TCZ7 52 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 LINC00526Q96FQ7 95 aa2.26□□□□□ -2.05
CUL3-204ENST00000409777 DCHS1Q96JQ0 3298 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 IGHV3OR16-10A0A075B7F0 116 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 TRAV8-3A0A0A6YYJ7 113 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 CCL21O00585 134 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 COX6CP09669 75 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 RPS28P62857 69 aaKnown RBP2.25□□□□□ -2.05
CUL3-204ENST00000409777 SOSTDC1Q6X4U4 206 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 Q6ZSN1 163 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 TMEM219Q86XT9 240 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 CLEC2BQ92478 149 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 TMEM101Q96IK0 257 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 BPESC1Q9GZL8 116 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 ASPMQ8IZT6 3477 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 RBMY1BA6NDE4 496 aaKnown RBP2.25□□□□□ -2.05
CUL3-204ENST00000409777 RBMY1EA6NEQ0 496 aaKnown RBP2.25□□□□□ -2.05
CUL3-204ENST00000409777 FSHBP01225 129 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 IGHV4-39P01824 125 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 RBMY1DP0C7P1 496 aaKnown RBP2.25□□□□□ -2.05
CUL3-204ENST00000409777 CD28P10747 220 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 CRYGAP11844 174 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 SEC61GP60059 68 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 HERV-K104P63124 156 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 ZNF56Q15929 161 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 C3orf22Q8N5N4 141 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 LINC00167Q96N53 147 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 VPREB3Q9UKI3 123 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms