RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 HIST2H2BDQ6DRA6 164 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 C1orf229Q6ZS94 237 aaPredicted RBP5.57□□□□□ -1.52
SH3D19-203ENST00000409598 GATD1Q8NB37 220 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 PPDPFLQ8WWR9 84 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 LAMTOR3Q9UHA4 124 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 TNCP24821 2201 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 IGHV1-58A0A0C4DH39 117 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 CEND1Q8N111 149 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 Q8N8P6 123 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 B5MCH6 92 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 C5orf38Q86SI9 138 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 WFDC10AQ9H1F0 79 aa5.57□□□□□ -1.52
SH3D19-203ENST00000409598 A4D1N5 150 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 J3QL48 77 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 FAM104BQ5XKR9 115 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 SLC25A29Q8N8R3 303 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 PTPRBP23467 1997 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 H7C423 109 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 REG3AQ06141 175 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 EML6Q6ZMW3 1958 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 MYO9AB2RTY4 2548 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 C9JAW5 83 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 TIMM17AQ99595 171 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 CRYBA4P53673 196 aa5.56□□□□□ -1.52
SH3D19-203ENST00000409598 PCP2Q8IVA1 136 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 CARD19Q96LW7 228 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 MDFIQ99750 246 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 CHCHD7Q9BUK0 85 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.55□□□□□ -1.52
SH3D19-203ENST00000409598 IGKV2-29A2NJV5 120 aaPredicted RBP5.55□□□□□ -1.52
SH3D19-203ENST00000409598 FGF6P10767 208 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 IFITM1P13164 125 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 MRGPRG-AS1Q2M3A8 158 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 Q9H8V8 135 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 SORL1Q92673 2214 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 IGLV2-14P01704 120 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 ATXN8Q156A1 80 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 CRIP3Q6Q6R5 217 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 DKK2Q9UBU2 259 aa5.55□□□□□ -1.52
SH3D19-203ENST00000409598 C12orf74Q32Q52 190 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 C2orf82Q6UX34 121 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 WFDC9Q8NEX5 89 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 ZNF706Q9Y5V0 76 aaPredicted RBP5.54□□□□□ -1.52
SH3D19-203ENST00000409598 LTAP01374 205 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 CTRLP40313 264 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 HERV-K104P63124 156 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 Q6ZTC4 211 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 WFDC2Q14508 124 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 SUMO4Q6EEV6 95 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 USP9XQ93008 2570 aaPredicted RBP5.54□□□□□ -1.52
SH3D19-203ENST00000409598 EML5Q05BV3 1969 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 LINC01545Q5VT33 79 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 TP53TG3Q9ULZ0 132 aa5.54□□□□□ -1.52
SH3D19-203ENST00000409598 TRAV26-2A0A0B4J265 109 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 C16orf90A8MZG2 172 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 ODF3L2Q3SX64 289 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 MRPL51Q4U2R6 128 aaKnown RBP5.53□□□□□ -1.52
SH3D19-203ENST00000409598 SMIM20Q8N5G0 67 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 ZFAND3Q9H8U3 227 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 E7EUB6 86 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 EGR2P11161 476 aaPredicted RBP5.53□□□□□ -1.52
SH3D19-203ENST00000409598 UBE2D4Q9Y2X8 147 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 PCNX3Q9H6A9 2034 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 TRBV20-1A0A075B6N2 111 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 TRBV6-1A0A0K0K1D8 114 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 PRAC2D3DTV9 90 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 C9orf153Q5TBE3 101 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 CLUHP3Q96NS8 147 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
SH3D19-203ENST00000409598 SYCNQ0VAF6 134 aa5.52□□□□□ -1.53
SH3D19-203ENST00000409598 SPATA12Q7Z6I5 190 aa5.52□□□□□ -1.53
SH3D19-203ENST00000409598 LINC00269Q8N2A0 174 aa5.52□□□□□ -1.53
SH3D19-203ENST00000409598 MDFICQ9P1T7 246 aa5.52□□□□□ -1.53
SH3D19-203ENST00000409598 HECTD1Q9ULT8 2610 aa5.52□□□□□ -1.53
SH3D19-203ENST00000409598 Q6ZPA2 131 aa5.52□□□□□ -1.53
SH3D19-203ENST00000409598 C6orf223Q8N319 242 aa5.52□□□□□ -1.53
SH3D19-203ENST00000409598 ZNF625Q96I27 306 aaPredicted RBP5.52□□□□□ -1.53
SH3D19-203ENST00000409598 NPYP01303 97 aa5.52□□□□□ -1.53
SH3D19-203ENST00000409598 TLN2Q9Y4G6 2542 aa5.52□□□□□ -1.53
SH3D19-203ENST00000409598 LOC107984640A0A0U1RRK4 108 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 PLA2G1BP04054 148 aaKnown RBP5.51□□□□□ -1.53
SH3D19-203ENST00000409598 HIGD2BQ4VC39 106 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 MRPL35Q9NZE8 188 aaKnown RBP5.51□□□□□ -1.53
SH3D19-203ENST00000409598 FXYD2P54710 66 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 LINC00336Q6ZUF6 198 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 C9orf85Q96MD7 179 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 PATE2Q6UY27 113 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 SBSPONQ8IVN8 264 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 BOD1L2Q8IYS8 172 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 RS1O15537 224 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 UFSP1Q6NVU6 142 aa5.51□□□□□ -1.53
SH3D19-203ENST00000409598 FN1P02751 2386 aaKnown RBP5.51□□□□□ -1.53
SH3D19-203ENST00000409598 P0C879 139 aa5.5□□□□□ -1.53
SH3D19-203ENST00000409598 DEFB1P60022 68 aa5.5□□□□□ -1.53
SH3D19-203ENST00000409598 NPC2P61916 151 aa5.5□□□□□ -1.53
SH3D19-203ENST00000409598 IGKV2D-26A0A0A0MRZ7 120 aa5.5□□□□□ -1.53
SH3D19-203ENST00000409598 MORN5Q5VZ52 161 aa5.5□□□□□ -1.53
SH3D19-203ENST00000409598 CHCHD10Q8WYQ3 142 aaPredicted RBP5.5□□□□□ -1.53
SH3D19-203ENST00000409598 COX7B2Q8TF08 81 aa5.5□□□□□ -1.53
SH3D19-203ENST00000409598 TRBV6-8A0A0A6YYG3 113 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms