RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 A0A0J9YXY3 114 aa11.47□□□□□ -0.57
LIMS2-205ENST00000409455 C5orf56Q8N8D9 126 aa11.47□□□□□ -0.57
LIMS2-205ENST00000409455 CSPG4Q6UVK1 2322 aa11.47□□□□□ -0.57
LIMS2-205ENST00000409455 COX6CP09669 75 aa11.47□□□□□ -0.57
LIMS2-205ENST00000409455 ZNF56Q15929 161 aa11.47□□□□□ -0.57
LIMS2-205ENST00000409455 SMIM20Q8N5G0 67 aa11.47□□□□□ -0.57
LIMS2-205ENST00000409455 LINC01356Q8N9X3 169 aa11.47□□□□□ -0.57
LIMS2-205ENST00000409455 MDFICQ9P1T7 246 aa11.47□□□□□ -0.57
LIMS2-205ENST00000409455 ZANQ9Y493 2812 aa11.46□□□□□ -0.57
LIMS2-205ENST00000409455 KLLNB2CW77 178 aa11.46□□□□□ -0.57
LIMS2-205ENST00000409455 MRPL23Q16540 153 aaKnown RBP11.46□□□□□ -0.57
LIMS2-205ENST00000409455 TMEM219Q86XT9 240 aa11.46□□□□□ -0.57
LIMS2-205ENST00000409455 LINC00527Q9UJ94 153 aa11.46□□□□□ -0.58
LIMS2-205ENST00000409455 ICOSQ9Y6W8 199 aa11.46□□□□□ -0.58
LIMS2-205ENST00000409455 H3BT86 120 aa11.45□□□□□ -0.58
LIMS2-205ENST00000409455 TRBV12-3P01733 135 aa11.45□□□□□ -0.58
LIMS2-205ENST00000409455 CFAP161Q6P656 301 aa11.45□□□□□ -0.58
LIMS2-205ENST00000409455 A0A0J9YXV3 536 aa11.45□□□□□ -0.58
LIMS2-205ENST00000409455 H7C423 109 aa11.45□□□□□ -0.58
LIMS2-205ENST00000409455 PRSS2P07478 247 aa11.45□□□□□ -0.58
LIMS2-205ENST00000409455 HERV-K104P63124 156 aa11.44□□□□□ -0.58
LIMS2-205ENST00000409455 FAM240AA0A1B0GVK7 77 aa11.44□□□□□ -0.58
LIMS2-205ENST00000409455 M0QY20 66 aa11.44□□□□□ -0.58
LIMS2-205ENST00000409455 LRRC75A-AS1Q8N1F1 130 aa11.44□□□□□ -0.58
LIMS2-205ENST00000409455 C20orf203Q8NBC4 194 aa11.44□□□□□ -0.58
LIMS2-205ENST00000409455 TIMM21Q9BVV7 248 aa11.44□□□□□ -0.58
LIMS2-205ENST00000409455 ZNF580Q9UK33 172 aa11.44□□□□□ -0.58
LIMS2-205ENST00000409455 IGHV3-30-3P0DP02 117 aa11.43□□□□□ -0.58
LIMS2-205ENST00000409455 TRAV12-3A0A0B4J271 114 aa11.43□□□□□ -0.58
LIMS2-205ENST00000409455 MEIG1Q5JSS6 88 aa11.43□□□□□ -0.58
LIMS2-205ENST00000409455 IGLV4-3A0A075B6K6 122 aa11.42□□□□□ -0.58
LIMS2-205ENST00000409455 ADARB2-AS1A8MUL3 147 aa11.42□□□□□ -0.58
LIMS2-205ENST00000409455 SPXQ9BT56 116 aa11.42□□□□□ -0.58
LIMS2-205ENST00000409455 MOB4Q9Y3A3 225 aa11.42□□□□□ -0.58
LIMS2-205ENST00000409455 LY6EQ16553 131 aa11.42□□□□□ -0.58
LIMS2-205ENST00000409455 C19orf54Q5BKX5 351 aa11.42□□□□□ -0.58
LIMS2-205ENST00000409455 SHISA2Q6UWI4 295 aa11.42□□□□□ -0.58
LIMS2-205ENST00000409455 LITAFQ99732 161 aa11.42□□□□□ -0.58
LIMS2-205ENST00000409455 RHPN1-AS1Q9BWJ2 59 aa11.42□□□□□ -0.58
LIMS2-205ENST00000409455 I3L3M4 83 aa11.41□□□□□ -0.58
LIMS2-205ENST00000409455 Q96MF0 132 aa11.41□□□□□ -0.58
LIMS2-205ENST00000409455 H3BUX3 64 aa11.41□□□□□ -0.58
LIMS2-205ENST00000409455 PRRC2AP48634 2157 aaKnown RBP11.41□□□□□ -0.58
LIMS2-205ENST00000409455 IGHV4-31P0DP07 118 aa11.4□□□□□ -0.58
LIMS2-205ENST00000409455 KRTAP1-3Q8IUG1 177 aa11.4□□□□□ -0.58
LIMS2-205ENST00000409455 SPANXDQ9BXN6 97 aa11.4□□□□□ -0.58
LIMS2-205ENST00000409455 SPANXCQ9NY87 97 aa11.4□□□□□ -0.58
LIMS2-205ENST00000409455 C9orf85Q96MD7 179 aa11.4□□□□□ -0.59
LIMS2-205ENST00000409455 ZNF469Q96JG9 3925 aaPredicted RBP11.39□□□□□ -0.59
LIMS2-205ENST00000409455 IGHV3-16A0A0C4DH30 117 aa11.39□□□□□ -0.59
LIMS2-205ENST00000409455 IGHV3-11P01762 117 aa11.39□□□□□ -0.59
LIMS2-205ENST00000409455 ID1P41134 155 aa11.39□□□□□ -0.59
LIMS2-205ENST00000409455 CREBBPQ92793 2442 aa11.39□□□□□ -0.59
LIMS2-205ENST00000409455 LST1O00453 97 aa11.39□□□□□ -0.59
LIMS2-205ENST00000409455 CD28P10747 220 aa11.39□□□□□ -0.59
LIMS2-205ENST00000409455 MIAQ16674 131 aa11.39□□□□□ -0.59
LIMS2-205ENST00000409455 CLEC2BQ92478 149 aa11.39□□□□□ -0.59
LIMS2-205ENST00000409455 DUX3Q96PT4 197 aa11.39□□□□□ -0.59
LIMS2-205ENST00000409455 J3QLI3 93 aa11.38□□□□□ -0.59
LIMS2-205ENST00000409455 USMG5Q96IX5 58 aa11.38□□□□□ -0.59
LIMS2-205ENST00000409455 NDUFA12Q9UI09 145 aa11.38□□□□□ -0.59
LIMS2-205ENST00000409455 ADAMTSL4-AS1Q5T5F5 129 aa11.38□□□□□ -0.59
LIMS2-205ENST00000409455 CHCHD5Q9BSY4 110 aa11.38□□□□□ -0.59
LIMS2-205ENST00000409455 DAZ1Q9NQZ3 744 aaKnown RBP11.38□□□□□ -0.59
LIMS2-205ENST00000409455 TRGV11A0A075B6L2 103 aa11.37□□□□□ -0.59
LIMS2-205ENST00000409455 TRAV8-3A0A0A6YYJ7 113 aa11.37□□□□□ -0.59
LIMS2-205ENST00000409455 IGHV1-58A0A0C4DH39 117 aa11.37□□□□□ -0.59
LIMS2-205ENST00000409455 TRBV7-7A0A0K0K1E9 115 aa11.37□□□□□ -0.59
LIMS2-205ENST00000409455 A6NDX4 124 aa11.37□□□□□ -0.59
LIMS2-205ENST00000409455 MRPS36P82909 103 aaKnown RBP11.37□□□□□ -0.59
LIMS2-205ENST00000409455 DEFB121Q5J5C9 76 aa11.37□□□□□ -0.59
LIMS2-205ENST00000409455 CCDC168Q8NDH2 2452 aa11.37□□□□□ -0.59
LIMS2-205ENST00000409455 TMEM101Q96IK0 257 aa11.37□□□□□ -0.59
LIMS2-205ENST00000409455 TEX15Q9BXT5 2789 aa11.36□□□□□ -0.59
LIMS2-205ENST00000409455 CR1P17927 2039 aa11.36□□□□□ -0.59
LIMS2-205ENST00000409455 NPC2P61916 151 aa11.36□□□□□ -0.59
LIMS2-205ENST00000409455 DEFB112Q30KQ8 113 aa11.36□□□□□ -0.59
LIMS2-205ENST00000409455 YAE1D1Q9NRH1 226 aa11.36□□□□□ -0.59
LIMS2-205ENST00000409455 BLCAPP62952 87 aa11.36□□□□□ -0.59
LIMS2-205ENST00000409455 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
LIMS2-205ENST00000409455 PYGO1Q9Y3Y4 419 aa11.36□□□□□ -0.59
LIMS2-205ENST00000409455 Q6ZSV7 163 aa11.35□□□□□ -0.59
LIMS2-205ENST00000409455 WFDC11Q8NEX6 87 aa11.35□□□□□ -0.59
LIMS2-205ENST00000409455 TMEM126AQ9H061 195 aa11.35□□□□□ -0.59
LIMS2-205ENST00000409455 H3BUA1 57 aa11.34□□□□□ -0.59
LIMS2-205ENST00000409455 TRAV12-2A0A075B6T6 113 aa11.34□□□□□ -0.59
LIMS2-205ENST00000409455 IGHV4-59P01825 116 aa11.34□□□□□ -0.59
LIMS2-205ENST00000409455 PF4V1P10720 104 aa11.34□□□□□ -0.59
LIMS2-205ENST00000409455 VSIG2Q96IQ7 327 aa11.34□□□□□ -0.59
LIMS2-205ENST00000409455 DCANP1Q8TF63 244 aa11.33□□□□□ -0.6
LIMS2-205ENST00000409455 ITPR2Q14571 2701 aa11.33□□□□□ -0.6
LIMS2-205ENST00000409455 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
LIMS2-205ENST00000409455 BRI3O95415 125 aa11.32□□□□□ -0.6
LIMS2-205ENST00000409455 IGKV3-20P01619 116 aa11.32□□□□□ -0.6
LIMS2-205ENST00000409455 IGHG2P01859 326 aa11.32□□□□□ -0.6
LIMS2-205ENST00000409455 ACYP1P07311 99 aa11.32□□□□□ -0.6
LIMS2-205ENST00000409455 GCN1Q92616 2671 aaKnown RBP11.32□□□□□ -0.6
LIMS2-205ENST00000409455 FSHBP01225 129 aa11.32□□□□□ -0.6
LIMS2-205ENST00000409455 IMUPQ9GZP8 106 aa11.32□□□□□ -0.6
LIMS2-205ENST00000409455 PDZD2O15018 2839 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms