RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 IGLV4-3A0A075B6K6 122 aa12.41□□□□□ -0.42
SYNC-202ENST00000409190 SLC25A20O43772 301 aa12.41□□□□□ -0.42
SYNC-202ENST00000409190 LYRM7Q5U5X0 104 aa12.41□□□□□ -0.42
SYNC-202ENST00000409190 I3L3M4 83 aa12.41□□□□□ -0.42
SYNC-202ENST00000409190 PPDPFLQ8WWR9 84 aa12.41□□□□□ -0.42
SYNC-202ENST00000409190 C9orf85Q96MD7 179 aa12.41□□□□□ -0.42
SYNC-202ENST00000409190 TMEM223A0PJW6 202 aa12.4□□□□□ -0.42
SYNC-202ENST00000409190 ZNF625Q96I27 306 aaPredicted RBP12.4□□□□□ -0.42
SYNC-202ENST00000409190 GEMIN7Q9H840 131 aaKnown RBP12.4□□□□□ -0.42
SYNC-202ENST00000409190 Q6ZUT4 128 aa12.4□□□□□ -0.42
SYNC-202ENST00000409190 TRAV26-1A0A087WT03 109 aa12.39□□□□□ -0.43
SYNC-202ENST00000409190 PSMB8P28062 276 aa12.39□□□□□ -0.43
SYNC-202ENST00000409190 FN1P02751 2386 aaKnown RBP12.39□□□□□ -0.43
SYNC-202ENST00000409190 H3BUA1 57 aa12.39□□□□□ -0.43
SYNC-202ENST00000409190 HOXD3P31249 432 aaPredicted RBP12.39□□□□□ -0.43
SYNC-202ENST00000409190 SLURP1P55000 103 aa12.39□□□□□ -0.43
SYNC-202ENST00000409190 IGHV3-30-3P0DP02 117 aa12.39□□□□□ -0.43
SYNC-202ENST00000409190 C11orf44Q8N8P7 122 aa12.39□□□□□ -0.43
SYNC-202ENST00000409190 NTN5Q8WTR8 489 aaPredicted RBP12.39□□□□□ -0.43
SYNC-202ENST00000409190 TIMM21Q9BVV7 248 aa12.39□□□□□ -0.43
SYNC-202ENST00000409190 TCTEX1D4Q5JR98 221 aa12.38□□□□□ -0.43
SYNC-202ENST00000409190 TNFRSF18Q9Y5U5 241 aa12.38□□□□□ -0.43
SYNC-202ENST00000409190 K7EQG2 157 aa12.38□□□□□ -0.43
SYNC-202ENST00000409190 IGHV3-33P01772 117 aa12.38□□□□□ -0.43
SYNC-202ENST00000409190 LEPROTO15243 131 aa12.38□□□□□ -0.43
SYNC-202ENST00000409190 Q6ZSN1 163 aa12.37□□□□□ -0.43
SYNC-202ENST00000409190 POM121L12Q8N7R1 296 aa12.37□□□□□ -0.43
SYNC-202ENST00000409190 A0A0J9YXY3 114 aa12.36□□□□□ -0.43
SYNC-202ENST00000409190 B4DSR2 109 aa12.36□□□□□ -0.43
SYNC-202ENST00000409190 ACANP16112 2415 aa12.36□□□□□ -0.43
SYNC-202ENST00000409190 K7EMT4 169 aa12.36□□□□□ -0.43
SYNC-202ENST00000409190 ADAMTSL4-AS1Q5T5F5 129 aa12.36□□□□□ -0.43
SYNC-202ENST00000409190 TRBV7-9A0A0J9YWB2 115 aa12.36□□□□□ -0.43
SYNC-202ENST00000409190 TRBV20-1A0A075B6N2 111 aa12.35□□□□□ -0.43
SYNC-202ENST00000409190 TRBV6-5A0A0K0K1A5 114 aa12.35□□□□□ -0.43
SYNC-202ENST00000409190 CRYBA4P53673 196 aa12.35□□□□□ -0.43
SYNC-202ENST00000409190 CFHR3Q02985 330 aa12.35□□□□□ -0.43
SYNC-202ENST00000409190 TEX49A0A1B0GTD5 131 aa12.35□□□□□ -0.43
SYNC-202ENST00000409190 SCGB1A1P11684 91 aa12.35□□□□□ -0.43
SYNC-202ENST00000409190 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
SYNC-202ENST00000409190 NSUN5P1Q3KNT7 163 aa12.34□□□□□ -0.43
SYNC-202ENST00000409190 NDUFA12Q9UI09 145 aa12.34□□□□□ -0.43
SYNC-202ENST00000409190 RHOHQ15669 191 aa12.34□□□□□ -0.43
SYNC-202ENST00000409190 RPL32P62910 135 aaKnown RBP12.33□□□□□ -0.43
SYNC-202ENST00000409190 CLEC2BQ92478 149 aa12.33□□□□□ -0.43
SYNC-202ENST00000409190 LINC01587Q99440 93 aa12.33□□□□□ -0.44
SYNC-202ENST00000409190 IGHV3-53P01767 116 aa12.33□□□□□ -0.44
SYNC-202ENST00000409190 GATA3P23771 443 aa12.33□□□□□ -0.44
SYNC-202ENST00000409190 TRIAP1O43715 76 aa12.32□□□□□ -0.44
SYNC-202ENST00000409190 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
SYNC-202ENST00000409190 UBE2E2Q96LR5 201 aa12.32□□□□□ -0.44
SYNC-202ENST00000409190 TRGV11A0A075B6L2 103 aa12.32□□□□□ -0.44
SYNC-202ENST00000409190 RNF183Q96D59 192 aa12.32□□□□□ -0.44
SYNC-202ENST00000409190 DGAT2L7PQ6IED9 249 aa12.31□□□□□ -0.44
SYNC-202ENST00000409190 NDUFA7O95182 113 aa12.3□□□□□ -0.44
SYNC-202ENST00000409190 XCL2Q9UBD3 114 aa12.3□□□□□ -0.44
SYNC-202ENST00000409190 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
SYNC-202ENST00000409190 LINC01620Q4KN68 170 aa12.3□□□□□ -0.44
SYNC-202ENST00000409190 TMEM61Q8N0U2 210 aa12.3□□□□□ -0.44
SYNC-202ENST00000409190 RBMY1BA6NDE4 496 aaKnown RBP12.29□□□□□ -0.44
SYNC-202ENST00000409190 RBMY1EA6NEQ0 496 aaKnown RBP12.29□□□□□ -0.44
SYNC-202ENST00000409190 RBMY1DP0C7P1 496 aaKnown RBP12.29□□□□□ -0.44
SYNC-202ENST00000409190 A0A1W2PRX2 142 aa12.29□□□□□ -0.44
SYNC-202ENST00000409190 CRLF1O75462 422 aa12.28□□□□□ -0.44
SYNC-202ENST00000409190 ANAPC13Q9BS18 74 aa12.28□□□□□ -0.44
SYNC-202ENST00000409190 M0R2P5 195 aa12.28□□□□□ -0.44
SYNC-202ENST00000409190 CDKN2A-AS1Q9UH64 79 aa12.28□□□□□ -0.44
SYNC-202ENST00000409190 FAM104AQ969W3 186 aa12.27□□□□□ -0.44
SYNC-202ENST00000409190 ATXN8Q156A1 80 aa12.27□□□□□ -0.45
SYNC-202ENST00000409190 C2orf82Q6UX34 121 aa12.27□□□□□ -0.45
SYNC-202ENST00000409190 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.27□□□□□ -0.45
SYNC-202ENST00000409190 TEX29Q8N6K0 151 aa12.27□□□□□ -0.45
SYNC-202ENST00000409190 TRAV13-1A0A0B4J241 112 aa12.26□□□□□ -0.45
SYNC-202ENST00000409190 TRAV4A0A0B4J268 109 aa12.26□□□□□ -0.45
SYNC-202ENST00000409190 BRI3O95415 125 aa12.26□□□□□ -0.45
SYNC-202ENST00000409190 DYNLRB2Q8TF09 96 aa12.26□□□□□ -0.45
SYNC-202ENST00000409190 IGKV3OR2-268A0A0C4DH90 116 aa12.26□□□□□ -0.45
SYNC-202ENST00000409190 ZFAND6Q6FIF0 208 aa12.25□□□□□ -0.45
SYNC-202ENST00000409190 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
SYNC-202ENST00000409190 H3BMM0 161 aa12.25□□□□□ -0.45
SYNC-202ENST00000409190 PRB1P04280 392 aa12.25□□□□□ -0.45
SYNC-202ENST00000409190 ICOSQ9Y6W8 199 aa12.25□□□□□ -0.45
SYNC-202ENST00000409190 A0A0B4J2C4 111 aa12.24□□□□□ -0.45
SYNC-202ENST00000409190 SNCGO76070 127 aa12.24□□□□□ -0.45
SYNC-202ENST00000409190 RPL13AP40429 203 aaKnown RBP12.24□□□□□ -0.45
SYNC-202ENST00000409190 TTC32Q5I0X7 151 aa12.24□□□□□ -0.45
SYNC-202ENST00000409190 NOTCH2Q04721 2471 aa12.24□□□□□ -0.45
SYNC-202ENST00000409190 LITAFQ99732 161 aa12.24□□□□□ -0.45
SYNC-202ENST00000409190 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.23□□□□□ -0.45
SYNC-202ENST00000409190 LINC01356Q8N9X3 169 aa12.23□□□□□ -0.45
SYNC-202ENST00000409190 CHCHD7Q9BUK0 85 aa12.23□□□□□ -0.45
SYNC-202ENST00000409190 PRORYQ9H606 182 aa12.23□□□□□ -0.45
SYNC-202ENST00000409190 VSIG2Q96IQ7 327 aa12.23□□□□□ -0.45
SYNC-202ENST00000409190 TRGV1A0A0A0MS02 117 aa12.22□□□□□ -0.45
SYNC-202ENST00000409190 MRPS36P82909 103 aaKnown RBP12.22□□□□□ -0.45
SYNC-202ENST00000409190 COX6A2Q02221 97 aa12.22□□□□□ -0.45
SYNC-202ENST00000409190 ODF3Q96PU9 254 aa12.22□□□□□ -0.45
SYNC-202ENST00000409190 VPREB3Q9UKI3 123 aa12.22□□□□□ -0.45
SYNC-202ENST00000409190 UBE2D4Q9Y2X8 147 aa12.22□□□□□ -0.45
SYNC-202ENST00000409190 NBEAL2Q6ZNJ1 2754 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms