RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 SPRR2FQ96RM1 72 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 LINC00472Q9H8W2 130 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 TRAPPC2LQ9UL33 140 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 UHRF1BP1LA0JNW5 1464 aa-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 YTHDC2Q9H6S0 1430 aaKnown RBP-1.32□□□□□ -2.62
MIR548I3-201ENST00000408378 RELNP78509 3460 aa-1.33□□□□□ -2.62
MIR548I3-201ENST00000408378 CCDC168Q8NDH2 2452 aa-1.33□□□□□ -2.62
MIR548I3-201ENST00000408378 E7EQ34 232 aa-1.33□□□□□ -2.62
MIR548I3-201ENST00000408378 FAM107AO95990 144 aa-1.33□□□□□ -2.62
MIR548I3-201ENST00000408378 POLR2HP52434 150 aaKnown RBP-1.33□□□□□ -2.62
MIR548I3-201ENST00000408378 DEFB123Q8N688 67 aa-1.33□□□□□ -2.62
MIR548I3-201ENST00000408378 THEM6Q8WUY1 208 aa-1.33□□□□□ -2.62
MIR548I3-201ENST00000408378 LRRK2Q5S007 2527 aa-1.33□□□□□ -2.62
MIR548I3-201ENST00000408378 PAPPAQ13219 1627 aa-1.33□□□□□ -2.62
MIR548I3-201ENST00000408378 MED23Q9ULK4 1368 aa-1.34□□□□□ -2.62
MIR548I3-201ENST00000408378 BORCS7-ASMTA0A0B4J1R7 106 aa-1.34□□□□□ -2.62
MIR548I3-201ENST00000408378 A0A1W2PRE2 83 aa-1.34□□□□□ -2.62
MIR548I3-201ENST00000408378 H0YJX3 145 aa-1.34□□□□□ -2.62
MIR548I3-201ENST00000408378 RBP4P02753 201 aa-1.34□□□□□ -2.62
MIR548I3-201ENST00000408378 UBE2D1P51668 147 aa-1.34□□□□□ -2.62
MIR548I3-201ENST00000408378 TMED4Q7Z7H5 227 aa-1.34□□□□□ -2.62
MIR548I3-201ENST00000408378 NDUFA12Q9UI09 145 aa-1.34□□□□□ -2.62
MIR548I3-201ENST00000408378 GCN1Q92616 2671 aaKnown RBP-1.34□□□□□ -2.62
MIR548I3-201ENST00000408378 ZZEF1O43149 2961 aa-1.35□□□□□ -2.62
MIR548I3-201ENST00000408378 DMXL1Q9Y485 3027 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 J3QLW9 94 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 RPL7P18124 248 aaKnown RBP-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 TMEM78Q5T7P6 136 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 STX12Q86Y82 276 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 AGPAT4-IT1Q9H0P7 198 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 BOLA2Q9H3K6 86 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 PARVGQ9HBI0 331 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 RPRMQ9NS64 109 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 KALRNO60229 2985 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 KNL1Q8NG31 2342 aa-1.35□□□□□ -2.63
MIR548I3-201ENST00000408378 YPEL1O60688 119 aa-1.36□□□□□ -2.63
MIR548I3-201ENST00000408378 HLA-DRB4P13762 266 aa-1.36□□□□□ -2.63
MIR548I3-201ENST00000408378 C9orf116Q5BN46 136 aaPredicted RBP-1.36□□□□□ -2.63
MIR548I3-201ENST00000408378 LINC01545Q5VT33 79 aa-1.36□□□□□ -2.63
MIR548I3-201ENST00000408378 SMIM4Q8WVI0 70 aa-1.36□□□□□ -2.63
MIR548I3-201ENST00000408378 C10orf82Q8WW14 230 aa-1.36□□□□□ -2.63
MIR548I3-201ENST00000408378 CCDC115Q96NT0 180 aa-1.36□□□□□ -2.63
MIR548I3-201ENST00000408378 HLA-DRB4X5D2U9 266 aa-1.36□□□□□ -2.63
MIR548I3-201ENST00000408378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.37□□□□□ -2.63
MIR548I3-201ENST00000408378 PFDN1O60925 122 aa-1.37□□□□□ -2.63
MIR548I3-201ENST00000408378 SMIM24O75264 130 aa-1.37□□□□□ -2.63
MIR548I3-201ENST00000408378 MT1AP04731 61 aa-1.37□□□□□ -2.63
MIR548I3-201ENST00000408378 SERPINB1P30740 379 aa-1.37□□□□□ -2.63
MIR548I3-201ENST00000408378 DEFB112Q30KQ8 113 aa-1.37□□□□□ -2.63
MIR548I3-201ENST00000408378 MUC22E2RYF6 1773 aaPredicted RBP-1.37□□□□□ -2.63
MIR548I3-201ENST00000408378 DOCK1Q14185 1865 aa-1.37□□□□□ -2.63
MIR548I3-201ENST00000408378 ITPR2Q14571 2701 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 LYSTQ99698 3801 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 FRYQ5TBA9 3013 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 MGAM2Q2M2H8 2515 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 A6NIN4 97 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 M0R135 149 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 CCL18P55774 89 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 CLLU1Q5K131 121 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 Q6JHZ5 121 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 ZNF818PQ6ZRF7 136 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 MAFIPQ8WZ33 124 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 CALML5Q9NZT1 146 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 NBEAL2Q6ZNJ1 2754 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 XIRP1Q702N8 1843 aaKnown RBP-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 CHD7Q9P2D1 2997 aa-1.38□□□□□ -2.63
MIR548I3-201ENST00000408378 DNAH8Q96JB1 4490 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 LRRC37A2A6NM11 1700 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 MT-ND4LP03901 98 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 PAEPP09466 180 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 PIRTP0C851 137 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 UBE2G1P62253 170 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 TMEM244Q5VVB8 128 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 RPL7L1Q6DKI1 246 aaKnown RBP-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 OR9Q1Q8NGQ5 310 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 LSM2Q9Y333 95 aaKnown RBP-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 LINC00312Q9Y6C7 94 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 R4GMQ9 66 aa-1.39□□□□□ -2.63
MIR548I3-201ENST00000408378 NSD3Q9BZ95 1437 aa-1.4□□□□□ -2.63
MIR548I3-201ENST00000408378 CTXND1A0A1B0GTU2 59 aa-1.4□□□□□ -2.63
MIR548I3-201ENST00000408378 IFNA17P01571 189 aa-1.4□□□□□ -2.63
MIR548I3-201ENST00000408378 SPANXN1Q5VSR9 72 aa-1.4□□□□□ -2.63
MIR548I3-201ENST00000408378 HOPXQ9BPY8 73 aaPredicted RBP-1.4□□□□□ -2.63
MIR548I3-201ENST00000408378 STOML2Q9UJZ1 356 aa-1.4□□□□□ -2.63
MIR548I3-201ENST00000408378 A0A0C4DFX4 3053 aa-1.4□□□□□ -2.63
MIR548I3-201ENST00000408378 ACACAQ13085 2346 aa-1.4□□□□□ -2.63
MIR548I3-201ENST00000408378 TRANK1O15050 2925 aa-1.41□□□□□ -2.63
MIR548I3-201ENST00000408378 GAPVD1Q14C86 1478 aa-1.41□□□□□ -2.63
MIR548I3-201ENST00000408378 EIF3AQ14152 1382 aaKnown RBP-1.41□□□□□ -2.64
MIR548I3-201ENST00000408378 PITX3O75364 302 aa-1.41□□□□□ -2.64
MIR548I3-201ENST00000408378 DPM2O94777 84 aa-1.41□□□□□ -2.64
MIR548I3-201ENST00000408378 PPP1R17O96001 155 aa-1.41□□□□□ -2.64
MIR548I3-201ENST00000408378 TMEM170BQ5T4T1 132 aa-1.41□□□□□ -2.64
MIR548I3-201ENST00000408378 MNS1Q8NEH6 495 aa-1.41□□□□□ -2.64
MIR548I3-201ENST00000408378 BANF2Q9H503 90 aa-1.41□□□□□ -2.64
MIR548I3-201ENST00000408378 PKD1L2Q7Z442 2459 aa-1.41□□□□□ -2.64
MIR548I3-201ENST00000408378 CASKIN1Q8WXD9 1431 aa-1.41□□□□□ -2.64
MIR548I3-201ENST00000408378 SRCAPQ6ZRS2 3230 aa-1.42□□□□□ -2.64
MIR548I3-201ENST00000408378 ZNF236Q9UL36 1845 aa-1.42□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms