RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 UBE2D3P61077 147 aa4.15□□□□□ -1.75
RPA3-204ENST00000406109 UBE2D2P62837 147 aa4.15□□□□□ -1.75
RPA3-204ENST00000406109 RIGQ13278 110 aa4.15□□□□□ -1.75
RPA3-204ENST00000406109 RASL11AQ6T310 242 aa4.15□□□□□ -1.75
RPA3-204ENST00000406109 NEXN-AS1Q8NBZ9 246 aa4.15□□□□□ -1.75
RPA3-204ENST00000406109 NUP35Q8NFH5 326 aa4.15□□□□□ -1.75
RPA3-204ENST00000406109 DNAJC30Q96LL9 226 aa4.15□□□□□ -1.75
RPA3-204ENST00000406109 CNFNQ9BYD5 112 aa4.15□□□□□ -1.75
RPA3-204ENST00000406109 TRAV26-2A0A0B4J265 109 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 SMIM27A0A1W2PRY6 76 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 TMEM218A2RU14 115 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 FAM231BA6NCW3 169 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 TMEM262E9PQX1 116 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 F8W036 122 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 H7C1H1 209 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 IGHV3-30P01768 117 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 IGHV3-33P01772 117 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 LINC00694P0DN24 101 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 IGHV3-30-3P0DP02 117 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 IGHV3-30-5P0DP03 117 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 KRTAP10-4P60372 401 aaPredicted RBP4.14□□□□□ -1.75
RPA3-204ENST00000406109 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 UQCC3Q6UW78 93 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 COMMD7Q86VX2 200 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 TMEM70Q9BUB7 260 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 NIT2Q9NQR4 276 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 NAT8BQ9UHF3 227 aa4.14□□□□□ -1.75
RPA3-204ENST00000406109 LPAP08519 4548 aa4.13□□□□□ -1.75
RPA3-204ENST00000406109 LRCOL1A6NCL2 159 aa4.13□□□□□ -1.75
RPA3-204ENST00000406109 PPP1R2P9O14990 202 aa4.13□□□□□ -1.75
RPA3-204ENST00000406109 MT-ND4LP03901 98 aa4.13□□□□□ -1.75
RPA3-204ENST00000406109 CAMPP49913 170 aa4.13□□□□□ -1.75
RPA3-204ENST00000406109 PNRC1Q12796 327 aaPredicted RBP4.13□□□□□ -1.75
RPA3-204ENST00000406109 DAZ4Q86SG3 579 aaKnown RBP4.13□□□□□ -1.75
RPA3-204ENST00000406109 GATD1Q8NB37 220 aa4.13□□□□□ -1.75
RPA3-204ENST00000406109 DEFB104AQ8WTQ1 72 aa4.13□□□□□ -1.75
RPA3-204ENST00000406109 DAZ3Q9NR90 486 aaKnown RBP4.13□□□□□ -1.75
RPA3-204ENST00000406109 URGCP-MRPS24S4R325 110 aa4.13□□□□□ -1.75
RPA3-204ENST00000406109 MUC2Q02817 5179 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 A0A087WX48 190 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 TRBV6-8A0A0A6YYG3 113 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 LINC00862A6NCI5 91 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 K7EP13 123 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 RAB4AP20338 218 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 TMEM97Q5BJF2 176 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 LINC01556Q5JQF7 62 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 KCNIP4Q6PIL6 250 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 Q6ZSA8 131 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 NTM-AS1Q6ZSK4 140 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 NFE4Q86UQ8 179 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 C10orf126Q8N4M7 172 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 ANAPC16Q96DE5 110 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 RPL39LQ96EH5 51 aaKnown RBP4.12□□□□□ -1.75
RPA3-204ENST00000406109 CHCHD5Q9BSY4 110 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 TMEM191AQ9H0A3 160 aa4.12□□□□□ -1.75
RPA3-204ENST00000406109 IGHV1-24A0A0C4DH33 117 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 GAS8-AS1O95177 125 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 PMCHP20382 165 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 GAGE6Q13070 117 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 MRPL54Q6P161 138 aaKnown RBP4.11□□□□□ -1.75
RPA3-204ENST00000406109 NIT1Q86X76 327 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 AMN1Q8IY45 258 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 RNF185Q96GF1 192 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 SEC11CQ9BY50 192 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 Q9HAA7 133 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 PLA2G2DQ9UNK4 145 aa4.11□□□□□ -1.75
RPA3-204ENST00000406109 TRBV25-1A0A075B6N4 114 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 IGLV5-52A0A0A0MRZ9 124 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 A0A1B0GW15 77 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 SMKR1H3BMG3 65 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 PSCAO43653 123 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 PLA2G1BP04054 148 aaKnown RBP4.1□□□□□ -1.75
RPA3-204ENST00000406109 S100A8P05109 93 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 ADCYAP1P18509 176 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 HBBP68871 147 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 COTL1Q14019 142 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 ELOBQ15370 118 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 FAM104BQ5XKR9 115 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 ATRAIDQ6UW56 229 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 MRAP2Q96G30 205 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 ST20Q9HBF5 79 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 KLK12Q9UKR0 248 aa4.1□□□□□ -1.75
RPA3-204ENST00000406109 TRAV8-3A0A0A6YYJ7 113 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 SDHAF1A6NFY7 115 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 I3L3M4 83 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 UBE2L6O14933 153 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 NCR2O95944 276 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 OXTP01178 125 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 ANGP03950 147 aaKnown RBP4.09□□□□□ -1.75
RPA3-204ENST00000406109 CKS2P33552 79 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 RPS10P46783 165 aaKnown RBP4.09□□□□□ -1.75
RPA3-204ENST00000406109 AMTP48728 403 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 PKIAP61925 76 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 IQCJQ1A5X6 159 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 MRPL51Q4U2R6 128 aaKnown RBP4.09□□□□□ -1.75
RPA3-204ENST00000406109 Q8N814 137 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 Q8N976 141 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 NTN5Q8WTR8 489 aaPredicted RBP4.09□□□□□ -1.75
RPA3-204ENST00000406109 UBE2WQ96B02 151 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms