RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 IQCF6A8MYZ5 107 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 H3BPC8 53 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 CLPSP04118 112 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 CD24P25063 80 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 RPL28P46779 137 aaKnown RBP2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 ROMO1P60602 79 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 UBE2D3P61077 147 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 UBE2D2P62837 147 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 LYZL1Q6UWQ5 148 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 TOMM5Q8N4H5 51 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 NHP2Q9NX24 153 aaKnown RBP2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 FAM215AQ9Y5M1 114 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 MINOS1-NBL1R4GNA1 71 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 MAST1Q9Y2H9 1570 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 C5P01031 1676 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 CASP8AP2Q9UKL3 1982 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 TOP2BQ02880 1626 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 WDR90Q96KV7 1748 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 HEATR5AQ86XA9 2040 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 A0A0D9SFI3 127 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 NPYP01303 97 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 CTSGP08311 255 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 KLKP1Q107X0 134 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 ZNF791Q3KP31 576 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 ASB16-AS1Q495Z4 193 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 SPANXN1Q5VSR9 72 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 C6orf201Q7Z4U5 140 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 VMO1Q7Z5L0 202 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 TMEM141Q96I45 108 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 XAGE1AQ9HD64 81 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 ARHGAP32A7KAX9 2087 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 MYO16Q9Y6X6 1858 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 MUC22E2RYF6 1773 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 PLCH1Q4KWH8 1693 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 CD163L1Q9NR16 1453 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 TSC2P49815 1807 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 SLX4Q8IY92 1834 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 TRAV22A0A0B4J277 110 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 TEX49A0A1B0GTD5 131 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 ODF3BA8MYP8 253 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 HCG22E2RYF7 251 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 ACYP1P07311 99 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 Q5VV11 94 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 HCP5Q6MZN7 132 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 C20orf197Q8N268 126 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 DYNLRB2Q8TF09 96 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 PSORS1C2Q9UIG4 136 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 POLR1AO95602 1720 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 KIF21BO75037 1637 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 LRP5O75197 1615 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 EIF2AK4Q9P2K8 1649 aaKnown RBP2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 CPS1P31327 1500 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 MED12LQ86YW9 2145 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 TJP1Q07157 1748 aa2.4□□□□□ -2.02
HMGB1P13-201ENST00000406019 TNS1Q9HBL0 1735 aaKnown RBP2.4□□□□□ -2.02
HMGB1P13-201ENST00000406019 PLXNA3P51805 1871 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 hDV103S1A0JD37 113 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 F8WEM9 126 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 NDUFC1O43677 76 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 S100A3P33764 101 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 SPINT3P49223 89 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 FXYD7P58549 80 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 MIAQ16674 131 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 GDF5OSQ5U4N7 250 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 SLC48A1Q6P1K1 146 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 PPP1R1CQ8WVI7 109 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 Q96M85 177 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 PSENENQ9NZ42 101 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 LOC285556D6RIA3 1793 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 ARHGEF5Q12774 1597 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 USP32Q8NFA0 1604 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 COL14A1Q05707 1796 aaKnown RBP2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 A0A0J9YX75 114 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 LOC285095A0A1B0GVY8 99 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 H3BVH4 76 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 CRPP02741 224 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 C9orf116Q5BN46 136 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 Q6ZQT0 140 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 Q8N6K4 173 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 SMIM4Q8WVI0 70 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 C20orf166-AS1Q96NR2 134 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 MGAMO43451 1857 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 SLIT2O94813 1529 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 TULP4Q9NRJ4 1543 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 IGKV1D-42A0A075B6H8 117 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 MYMXA0A1B0GTQ4 84 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 TMEM30CPA0ZSE6 113 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 C11orf86A6NJI1 115 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 HMGN2P05204 90 aaKnown RBP2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 MIFP14174 115 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 FAM27BQ5VT28 67 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 PKD1L3Q7Z443 1732 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 SMIM7Q9BQ49 75 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 TIMM21Q9BVV7 248 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 CDC42SE1Q9NRR8 79 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 PLXNA1Q9UIW2 1896 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 CCL26Q9Y258 94 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 KDM6BO15054 1643 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 KIAA1549Q9HCM3 1950 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms