RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 IGHV3-30P01768 117 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 IGHV3-33P01772 117 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 IGHV3-30-3P0DP02 117 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 IGHV3-30-5P0DP03 117 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 C5orf38Q86SI9 138 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 BAHCC1Q9P281 2608 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 PFN2P35080 140 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 VSIG2Q96IQ7 327 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 CIDEAO60543 219 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 SPINK8P0C7L1 97 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 MIFP14174 115 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 HERVK_113P63121 156 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 SH2D6Q7Z4S9 175 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 ZZEF1O43149 2961 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 SETXQ7Z333 2677 aaKnown RBP6.69□□□□□ -1.34
LIG4-202ENST00000405925 LYRM9A8MSI8 78 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 IGLL5B9A064 214 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 H3BUT2 72 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 NDUFA12Q9UI09 145 aa6.69□□□□□ -1.34
LIG4-202ENST00000405925 SOCS3O14543 225 aa6.68□□□□□ -1.34
LIG4-202ENST00000405925 MAJINQ3KP22 176 aa6.68□□□□□ -1.34
LIG4-202ENST00000405925 TDRG1Q3Y452 100 aa6.68□□□□□ -1.34
LIG4-202ENST00000405925 SPATA25Q9BR10 227 aa6.68□□□□□ -1.34
LIG4-202ENST00000405925 IGHV4-28A0A0C4DH34 117 aa6.68□□□□□ -1.34
LIG4-202ENST00000405925 A0A1B0GV90 55 aa6.68□□□□□ -1.34
LIG4-202ENST00000405925 NAA38Q9BRA0 125 aaKnown RBP6.68□□□□□ -1.34
LIG4-202ENST00000405925 KIR2DL5BA0A0G2JN68 375 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 KIR2DL5BA0A0G2JPC4 375 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 CFAP126Q5VTH2 177 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 KIR2DL5AQ8N109 375 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 C20orf203Q8NBC4 194 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 KIR2DL5BQ8NHK3 375 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 STAB1Q9NY15 2570 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 RBMY1BA6NDE4 496 aaKnown RBP6.67□□□□□ -1.34
LIG4-202ENST00000405925 RBMY1EA6NEQ0 496 aaKnown RBP6.67□□□□□ -1.34
LIG4-202ENST00000405925 J3QQQ9 107 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 RBMY1DP0C7P1 496 aaKnown RBP6.67□□□□□ -1.34
LIG4-202ENST00000405925 RBMY1A1P0DJD3 496 aaKnown RBP6.67□□□□□ -1.34
LIG4-202ENST00000405925 RBMY1CP0DJD4 496 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 IGLC3P0DOY3 106 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 CEMP1Q6PRD7 247 aaPredicted RBP6.67□□□□□ -1.34
LIG4-202ENST00000405925 NXPH4O95158 308 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 S100A7L2Q5SY68 101 aa6.67□□□□□ -1.34
LIG4-202ENST00000405925 OPRPNQ99935 248 aaPredicted RBP6.67□□□□□ -1.34
LIG4-202ENST00000405925 KRTAP1-3Q8IUG1 177 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 SLC25A29Q8N8R3 303 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 KLK12Q9UKR0 248 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 KALRNO60229 2985 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 DEFB131BA0A096LNP1 70 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 CDPF1Q6NVV7 123 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 KRTAP24-1Q3LI83 254 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 RMI2Q96E14 147 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 MUC3AQ02505 3323 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 M0QY20 66 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 RNF185Q96GF1 192 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 SPCS1Q9Y6A9 102 aa6.66□□□□□ -1.34
LIG4-202ENST00000405925 YPEL4Q96NS1 127 aa6.65□□□□□ -1.34
LIG4-202ENST00000405925 C9orf85Q96MD7 179 aa6.65□□□□□ -1.35
LIG4-202ENST00000405925 TIMM17AQ99595 171 aa6.65□□□□□ -1.35
LIG4-202ENST00000405925 ERG28Q9UKR5 140 aa6.65□□□□□ -1.35
LIG4-202ENST00000405925 COX8AP10176 69 aa6.65□□□□□ -1.35
LIG4-202ENST00000405925 NEXN-AS1Q8NBZ9 246 aa6.65□□□□□ -1.35
LIG4-202ENST00000405925 LOC400499M0QZD8 3231 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.64□□□□□ -1.35
LIG4-202ENST00000405925 PCP2Q8IVA1 136 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 BAALCQ8WXS3 180 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 TOMM6Q96B49 74 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 MYO15AQ9UKN7 3530 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 CRYGDP07320 174 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 ANKRD39Q53RE8 183 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 LINC01545Q5VT33 79 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 C1orf158Q8N1D5 194 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 GAS8-AS1O95177 125 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 Q6ZUT4 128 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 RETNQ9HD89 108 aa6.64□□□□□ -1.35
LIG4-202ENST00000405925 RS1O15537 224 aa6.63□□□□□ -1.35
LIG4-202ENST00000405925 COL6A5A8TX70 2615 aa6.63□□□□□ -1.35
LIG4-202ENST00000405925 LEPROTO15243 131 aa6.63□□□□□ -1.35
LIG4-202ENST00000405925 FHL3Q13643 280 aa6.63□□□□□ -1.35
LIG4-202ENST00000405925 Q9H8V8 135 aa6.63□□□□□ -1.35
LIG4-202ENST00000405925 TTTY13Q9BZ97 58 aa6.63□□□□□ -1.35
LIG4-202ENST00000405925 CST9LQ9H4G1 147 aa6.63□□□□□ -1.35
LIG4-202ENST00000405925 TEX15Q9BXT5 2789 aa6.63□□□□□ -1.35
LIG4-202ENST00000405925 KLK5Q9Y337 293 aaPredicted RBP6.62□□□□□ -1.35
LIG4-202ENST00000405925 TRBV6-4A0A1B0GX49 114 aa6.62□□□□□ -1.35
LIG4-202ENST00000405925 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
LIG4-202ENST00000405925 LINC00467Q9BRT7 94 aa6.62□□□□□ -1.35
LIG4-202ENST00000405925 CNFNQ9BYD5 112 aa6.62□□□□□ -1.35
LIG4-202ENST00000405925 LOC100131303A0A0U1RQF7 123 aa6.62□□□□□ -1.35
LIG4-202ENST00000405925 COX7A2LO14548 114 aa6.62□□□□□ -1.35
LIG4-202ENST00000405925 NBEAQ8NFP9 2946 aa6.62□□□□□ -1.35
LIG4-202ENST00000405925 ODF1Q14990 250 aa6.61□□□□□ -1.35
LIG4-202ENST00000405925 IGHV4-4A0A075B6R2 117 aa6.61□□□□□ -1.35
LIG4-202ENST00000405925 SLC25A20O43772 301 aa6.61□□□□□ -1.35
LIG4-202ENST00000405925 GTSF1LQ9H1H1 148 aa6.61□□□□□ -1.35
LIG4-202ENST00000405925 Q8N976 141 aa6.61□□□□□ -1.35
LIG4-202ENST00000405925 A0A1B0GWB2 263 aa6.6□□□□□ -1.35
LIG4-202ENST00000405925 CCL25O15444 150 aa6.6□□□□□ -1.35
LIG4-202ENST00000405925 NRACQ8N912 160 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms