RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 MDFIQ99750 246 aa18.15■□□□□ 0.5
CPNE1-205ENST00000401607 DNAH3Q8TD57 4116 aa18.15■□□□□ 0.5
CPNE1-205ENST00000401607 TRAV12-1A0A0B4J245 112 aa18.14■□□□□ 0.5
CPNE1-205ENST00000401607 TRGV4A0A0C4DH28 118 aa18.14■□□□□ 0.5
CPNE1-205ENST00000401607 TRBV6-4A0A1B0GX49 114 aa18.14■□□□□ 0.5
CPNE1-205ENST00000401607 LYRM9A8MSI8 78 aa18.14■□□□□ 0.5
CPNE1-205ENST00000401607 RPL36AP83881 106 aaKnown RBP18.14■□□□□ 0.5
CPNE1-205ENST00000401607 RPL36ALQ969Q0 106 aaKnown RBP18.14■□□□□ 0.5
CPNE1-205ENST00000401607 A0A087WX48 190 aa18.14■□□□□ 0.49
CPNE1-205ENST00000401607 TIMM17AQ99595 171 aa18.14■□□□□ 0.49
CPNE1-205ENST00000401607 IGLC3P0DOY3 106 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 TMEM141Q96I45 108 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 CHCHD7Q9BUK0 85 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 MRPL35Q9NZE8 188 aaKnown RBP18.12■□□□□ 0.49
CPNE1-205ENST00000401607 GAGE12JA6NER3 117 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 UBE2D3P61077 147 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 UBE2D2P62837 147 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 GAGE1Q13065 139 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 GAGE4Q13068 117 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 GAGE5Q13069 117 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 GAGE13Q4V321 117 aa18.12■□□□□ 0.49
CPNE1-205ENST00000401607 LOC100131303A0A0U1RQF7 123 aa18.11■□□□□ 0.49
CPNE1-205ENST00000401607 HSBP1L1C9JCN9 74 aa18.11■□□□□ 0.49
CPNE1-205ENST00000401607 COTL1Q14019 142 aa18.11■□□□□ 0.49
CPNE1-205ENST00000401607 MIEN1Q9BRT3 115 aa18.1■□□□□ 0.49
CPNE1-205ENST00000401607 PKD1L1Q8TDX9 2849 aa18.1■□□□□ 0.49
CPNE1-205ENST00000401607 DPM2O94777 84 aa18.09■□□□□ 0.49
CPNE1-205ENST00000401607 IGKCP01834 107 aa18.09■□□□□ 0.49
CPNE1-205ENST00000401607 PRSS29PA6NIE9 313 aa18.08■□□□□ 0.48
CPNE1-205ENST00000401607 DAZ4Q86SG3 579 aaKnown RBP18.08■□□□□ 0.48
CPNE1-205ENST00000401607 C14orf144Q96I85 54 aa18.08■□□□□ 0.48
CPNE1-205ENST00000401607 DAZ3Q9NR90 486 aaKnown RBP18.08■□□□□ 0.48
CPNE1-205ENST00000401607 CELA1Q9UNI1 258 aa18.08■□□□□ 0.48
CPNE1-205ENST00000401607 F8VRH5 84 aa18.07■□□□□ 0.48
CPNE1-205ENST00000401607 STPG4Q8N801 248 aa18.07■□□□□ 0.48
CPNE1-205ENST00000401607 CHTOPQ9Y3Y2 248 aaKnown RBP18.07■□□□□ 0.48
CPNE1-205ENST00000401607 ANKRD39Q53RE8 183 aa18.07■□□□□ 0.48
CPNE1-205ENST00000401607 ZC2HC1BQ5TFG8 222 aa18.07■□□□□ 0.48
CPNE1-205ENST00000401607 OPRPNQ99935 248 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-205ENST00000401607 RETNQ9HD89 108 aa18.07■□□□□ 0.48
CPNE1-205ENST00000401607 HHLA3Q9XRX5 114 aa18.07■□□□□ 0.48
CPNE1-205ENST00000401607 PRADC1Q9BSG0 188 aa18.06■□□□□ 0.48
CPNE1-205ENST00000401607 NBEAL2Q6ZNJ1 2754 aa18.05■□□□□ 0.48
CPNE1-205ENST00000401607 UQCR10Q9UDW1 63 aa18.05■□□□□ 0.48
CPNE1-205ENST00000401607 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-205ENST00000401607 IGKV2-29A2NJV5 120 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-205ENST00000401607 LINC00694P0DN24 101 aa18.04■□□□□ 0.48
CPNE1-205ENST00000401607 PMVKQ15126 192 aa18.04■□□□□ 0.48
CPNE1-205ENST00000401607 PYGO1Q9Y3Y4 419 aa18.04■□□□□ 0.48
CPNE1-205ENST00000401607 NTM-AS1Q6ZSK4 140 aa18.04■□□□□ 0.48
CPNE1-205ENST00000401607 IGLV4-3A0A075B6K6 122 aa18.03■□□□□ 0.48
CPNE1-205ENST00000401607 FAM104AQ969W3 186 aa18.03■□□□□ 0.48
CPNE1-205ENST00000401607 CST9LQ9H4G1 147 aa18.03■□□□□ 0.48
CPNE1-205ENST00000401607 PLNP26678 52 aa18.02■□□□□ 0.48
CPNE1-205ENST00000401607 CRYBA4P53673 196 aa18.02■□□□□ 0.48
CPNE1-205ENST00000401607 DAD1P61803 113 aa18.02■□□□□ 0.48
CPNE1-205ENST00000401607 UBE2D4Q9Y2X8 147 aa18.02■□□□□ 0.48
CPNE1-205ENST00000401607 SPART-AS1P0CW21 52 aa18.02■□□□□ 0.47
CPNE1-205ENST00000401607 CEMP1Q6PRD7 247 aaPredicted RBP18.01■□□□□ 0.47
CPNE1-205ENST00000401607 TP73-AS1Q9UF72 201 aa18.01■□□□□ 0.47
CPNE1-205ENST00000401607 TCTAP57738 103 aa18■□□□□ 0.47
CPNE1-205ENST00000401607 PRO0255Q9UI72 69 aa18■□□□□ 0.47
CPNE1-205ENST00000401607 IGLV4-69A0A075B6H9 119 aa17.99■□□□□ 0.47
CPNE1-205ENST00000401607 PRB2P02812 416 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-205ENST00000401607 SPANXA1Q9NS26 97 aa17.99■□□□□ 0.47
CPNE1-205ENST00000401607 DEFA6Q01524 100 aa17.99■□□□□ 0.47
CPNE1-205ENST00000401607 GTSF1LQ9H1H1 148 aa17.99■□□□□ 0.47
CPNE1-205ENST00000401607 SBSPONQ8IVN8 264 aa17.98■□□□□ 0.47
CPNE1-205ENST00000401607 NPSP0C0P6 89 aa17.97■□□□□ 0.47
CPNE1-205ENST00000401607 GYPEP15421 78 aa17.96■□□□□ 0.47
CPNE1-205ENST00000401607 KPRPQ5T749 579 aaPredicted RBP17.96■□□□□ 0.47
CPNE1-205ENST00000401607 COX8AP10176 69 aa17.96■□□□□ 0.47
CPNE1-205ENST00000401607 AMELXQ99217 191 aa17.96■□□□□ 0.47
CPNE1-205ENST00000401607 ATP5G1P05496 136 aa17.95■□□□□ 0.46
CPNE1-205ENST00000401607 VCX2Q9H322 139 aa17.95■□□□□ 0.46
CPNE1-205ENST00000401607 IGKV2D-26A0A0A0MRZ7 120 aa17.94■□□□□ 0.46
CPNE1-205ENST00000401607 C11orf86A6NJI1 115 aa17.94■□□□□ 0.46
CPNE1-205ENST00000401607 K7EIL1 84 aa17.94■□□□□ 0.46
CPNE1-205ENST00000401607 PAPPA-AS1Q5QFB9 102 aa17.94■□□□□ 0.46
CPNE1-205ENST00000401607 SLC25A34Q6PIV7 304 aa17.94■□□□□ 0.46
CPNE1-205ENST00000401607 TIMM21Q9BVV7 248 aa17.94■□□□□ 0.46
CPNE1-205ENST00000401607 HNRNPA3P51991 378 aaKnown RBP17.94■□□□□ 0.46
CPNE1-205ENST00000401607 VSIG2Q96IQ7 327 aa17.94■□□□□ 0.46
CPNE1-205ENST00000401607 PAX4O43316 350 aa17.93■□□□□ 0.46
CPNE1-205ENST00000401607 FGF6P10767 208 aa17.93■□□□□ 0.46
CPNE1-205ENST00000401607 Q6ZUT4 128 aa17.93■□□□□ 0.46
CPNE1-205ENST00000401607 TEX48A0A1B0GUV7 120 aa17.92■□□□□ 0.46
CPNE1-205ENST00000401607 RNASE13Q5GAN3 156 aaKnown RBP17.92■□□□□ 0.46
CPNE1-205ENST00000401607 NMUP48645 174 aa17.91■□□□□ 0.46
CPNE1-205ENST00000401607 TMEM243Q9BU79 118 aa17.91■□□□□ 0.46
CPNE1-205ENST00000401607 C11orf68Q9H3H3 251 aaKnown RBP17.91■□□□□ 0.46
CPNE1-205ENST00000401607 TRBV25-1A0A075B6N4 114 aa17.9■□□□□ 0.46
CPNE1-205ENST00000401607 CTAG1AP78358 180 aa17.9■□□□□ 0.46
CPNE1-205ENST00000401607 MRPS36P82909 103 aaKnown RBP17.9■□□□□ 0.46
CPNE1-205ENST00000401607 C12orf74Q32Q52 190 aa17.9■□□□□ 0.46
CPNE1-205ENST00000401607 MRPL52Q86TS9 123 aaKnown RBP17.9■□□□□ 0.46
CPNE1-205ENST00000401607 TRBV6-8A0A0A6YYG3 113 aa17.89■□□□□ 0.45
CPNE1-205ENST00000401607 A0A0J9YY99 117 aa17.89■□□□□ 0.45
CPNE1-205ENST00000401607 NFE4Q86UQ8 179 aa17.89■□□□□ 0.45
CPNE1-205ENST00000401607 PCP2Q8IVA1 136 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms