RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
DDX3X-201ENST00000399959 TICRRQ7Z2Z1 1910 aa10.29□□□□□ -0.76
DDX3X-201ENST00000399959 SEM1Q6ZVN7 128 aa10.29□□□□□ -0.76
DDX3X-201ENST00000399959 MAPK1IP1LQ8NDC0 245 aa10.29□□□□□ -0.76
DDX3X-201ENST00000399959 LINC00574Q9H8X3 128 aa10.29□□□□□ -0.76
DDX3X-201ENST00000399959 FAM222AQ5U5X8 452 aa10.28□□□□□ -0.76
DDX3X-201ENST00000399959 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
DDX3X-201ENST00000399959 GPHB5Q86YW7 130 aa10.27□□□□□ -0.76
DDX3X-201ENST00000399959 FAM19A3Q7Z5A8 133 aa10.27□□□□□ -0.77
DDX3X-201ENST00000399959 IBA57-AS1B1ANH7 110 aa10.27□□□□□ -0.77
DDX3X-201ENST00000399959 DEFB112Q30KQ8 113 aa10.27□□□□□ -0.77
DDX3X-201ENST00000399959 Q8N7P7 452 aa10.27□□□□□ -0.77
DDX3X-201ENST00000399959 CCDC140Q96MF4 163 aa10.26□□□□□ -0.77
DDX3X-201ENST00000399959 SIRPDQ9H106 197 aa10.26□□□□□ -0.77
DDX3X-201ENST00000399959 UBE2D3P61077 147 aa10.26□□□□□ -0.77
DDX3X-201ENST00000399959 UBE2D2P62837 147 aa10.26□□□□□ -0.77
DDX3X-201ENST00000399959 SHISA2Q6UWI4 295 aa10.26□□□□□ -0.77
DDX3X-201ENST00000399959 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
DDX3X-201ENST00000399959 TRBV27A0A0K0K1C4 114 aa10.26□□□□□ -0.77
DDX3X-201ENST00000399959 M0QY20 66 aa10.26□□□□□ -0.77
DDX3X-201ENST00000399959 CNOT1A5YKK6 2376 aaKnown RBP10.25□□□□□ -0.77
DDX3X-201ENST00000399959 IGHV4OR15-8A0A075B7B6 117 aa10.25□□□□□ -0.77
DDX3X-201ENST00000399959 A0A087WW49 117 aa10.25□□□□□ -0.77
DDX3X-201ENST00000399959 UBE2D1P51668 147 aa10.25□□□□□ -0.77
DDX3X-201ENST00000399959 IGF1P05019 195 aa10.25□□□□□ -0.77
DDX3X-201ENST00000399959 ODF3Q96PU9 254 aa10.25□□□□□ -0.77
DDX3X-201ENST00000399959 PYGO1Q9Y3Y4 419 aa10.25□□□□□ -0.77
DDX3X-201ENST00000399959 A8MZ25 164 aa10.25□□□□□ -0.77
DDX3X-201ENST00000399959 H0Y9J4 135 aa10.25□□□□□ -0.77
DDX3X-201ENST00000399959 CRIP2P52943 208 aaPredicted RBP10.25□□□□□ -0.77
DDX3X-201ENST00000399959 LOC107984640A0A0U1RRK4 108 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 NRGNQ92686 78 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 A6NED7 52 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 CCL24O00175 119 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 MSMPQ1L6U9 139 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 PPDPFQ9H3Y8 114 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 DKK4Q9UBT3 224 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 LYRM9A8MSI8 78 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 GAS8-AS1O95177 125 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 DEFB121Q5J5C9 76 aa10.24□□□□□ -0.77
DDX3X-201ENST00000399959 CACNA1BQ00975 2339 aa10.23□□□□□ -0.77
DDX3X-201ENST00000399959 TRBV6-5A0A0K0K1A5 114 aa10.23□□□□□ -0.77
DDX3X-201ENST00000399959 KLK5Q9Y337 293 aaPredicted RBP10.23□□□□□ -0.77
DDX3X-201ENST00000399959 IGHV4-38-2P0DP08 117 aa10.23□□□□□ -0.77
DDX3X-201ENST00000399959 MIFP14174 115 aa10.23□□□□□ -0.77
DDX3X-201ENST00000399959 SMAD5-AS1Q9Y6J3 95 aa10.22□□□□□ -0.77
DDX3X-201ENST00000399959 NCOA6Q14686 2063 aaPredicted RBP10.22□□□□□ -0.77
DDX3X-201ENST00000399959 TRAV7A0A075B6U4 112 aa10.22□□□□□ -0.77
DDX3X-201ENST00000399959 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
DDX3X-201ENST00000399959 NUP210Q8TEM1 1887 aaPredicted RBP10.22□□□□□ -0.77
DDX3X-201ENST00000399959 ZNF106Q9H2Y7 1883 aaKnown RBP10.22□□□□□ -0.77
DDX3X-201ENST00000399959 SEC61GP60059 68 aa10.21□□□□□ -0.77
DDX3X-201ENST00000399959 C6orf99Q4VX62 202 aa10.21□□□□□ -0.78
DDX3X-201ENST00000399959 IGKV4-1P06312 121 aa10.2□□□□□ -0.78
DDX3X-201ENST00000399959 TSHBP01222 138 aa10.2□□□□□ -0.78
DDX3X-201ENST00000399959 ESM1Q9NQ30 184 aa10.2□□□□□ -0.78
DDX3X-201ENST00000399959 A0A087WVE0 104 aa10.2□□□□□ -0.78
DDX3X-201ENST00000399959 CCKP06307 115 aa10.2□□□□□ -0.78
DDX3X-201ENST00000399959 SMIM11BQ8TCY0 68 aa10.2□□□□□ -0.78
DDX3X-201ENST00000399959 FREM1Q5H8C1 2179 aa10.19□□□□□ -0.78
DDX3X-201ENST00000399959 SOSTDC1Q6X4U4 206 aa10.19□□□□□ -0.78
DDX3X-201ENST00000399959 KLK12Q9UKR0 248 aa10.19□□□□□ -0.78
DDX3X-201ENST00000399959 CNFNQ9BYD5 112 aa10.19□□□□□ -0.78
DDX3X-201ENST00000399959 K7ENP7 123 aa10.18□□□□□ -0.78
DDX3X-201ENST00000399959 GRNP28799 593 aaKnown RBP10.18□□□□□ -0.78
DDX3X-201ENST00000399959 SPART-AS1P0CW21 52 aa10.18□□□□□ -0.78
DDX3X-201ENST00000399959 PMAIP1Q13794 54 aa10.18□□□□□ -0.78
DDX3X-201ENST00000399959 POLR2KP53803 58 aaKnown RBP10.18□□□□□ -0.78
DDX3X-201ENST00000399959 IGFL2Q6UWQ7 119 aa10.18□□□□□ -0.78
DDX3X-201ENST00000399959 C11orf21Q9P2W6 132 aa10.18□□□□□ -0.78
DDX3X-201ENST00000399959 PRR4Q16378 134 aa10.17□□□□□ -0.78
DDX3X-201ENST00000399959 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
DDX3X-201ENST00000399959 TMEM89A2RUT3 159 aa10.17□□□□□ -0.78
DDX3X-201ENST00000399959 ZFP36P26651 326 aaKnown RBP10.17□□□□□ -0.78
DDX3X-201ENST00000399959 NOTCH4Q99466 2003 aa10.16□□□□□ -0.78
DDX3X-201ENST00000399959 Q96MF0 132 aa10.16□□□□□ -0.78
DDX3X-201ENST00000399959 UBE2AP49459 152 aa10.16□□□□□ -0.78
DDX3X-201ENST00000399959 POM121L12Q8N7R1 296 aa10.16□□□□□ -0.78
DDX3X-201ENST00000399959 IGHV4-61A0A0C4DH41 118 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 COL6A6A6NMZ7 2263 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 PCNX2A6NKB5 2137 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 RNASE3P12724 160 aaKnown RBP10.15□□□□□ -0.78
DDX3X-201ENST00000399959 Q6ZTI0 123 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 RETNQ9HD89 108 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 IGIPA6NJ69 53 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 C3orf84H3BNL1 204 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 WFDC10BQ8IUB3 73 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 ADAMTS9Q9P2N4 1935 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 LINC00269Q8N2A0 174 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 MAP6D1Q9H9H5 199 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 PRO0255Q9UI72 69 aa10.15□□□□□ -0.78
DDX3X-201ENST00000399959 ODF3BA8MYP8 253 aa10.15□□□□□ -0.79
DDX3X-201ENST00000399959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.15□□□□□ -0.791e-7■■■□□ 17.3
DDX3X-201ENST00000399959 Q6ZQY7 126 aa10.14□□□□□ -0.79
DDX3X-201ENST00000399959 ACACAQ13085 2346 aa10.14□□□□□ -0.79
DDX3X-201ENST00000399959 PRO0628Q9UI54 55 aa10.14□□□□□ -0.79
DDX3X-201ENST00000399959 KIAA1549Q9HCM3 1950 aa10.14□□□□□ -0.79
DDX3X-201ENST00000399959 A0A096LNJ9 63 aa10.14□□□□□ -0.79
DDX3X-201ENST00000399959 REG3AQ06141 175 aa10.14□□□□□ -0.79
DDX3X-201ENST00000399959 PRR15LQ9BU68 103 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms