RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 UBE2D3P61077 147 aa16.76■□□□□ 0.27
RABGGTA-202ENST00000399409 UBE2D2P62837 147 aa16.76■□□□□ 0.27
RABGGTA-202ENST00000399409 PTPN13Q12923 2485 aa16.76■□□□□ 0.27
RABGGTA-202ENST00000399409 CFC1BP0CG36 223 aa16.76■□□□□ 0.27
RABGGTA-202ENST00000399409 CFC1P0CG37 223 aa16.76■□□□□ 0.27
RABGGTA-202ENST00000399409 FHL3Q13643 280 aa16.75■□□□□ 0.27
RABGGTA-202ENST00000399409 COTL1Q14019 142 aa16.75■□□□□ 0.27
RABGGTA-202ENST00000399409 MXRA5Q9NR99 2828 aa16.75■□□□□ 0.27
RABGGTA-202ENST00000399409 CREBBPQ92793 2442 aa16.75■□□□□ 0.27
RABGGTA-202ENST00000399409 ODF3L2Q3SX64 289 aa16.75■□□□□ 0.27
RABGGTA-202ENST00000399409 TMEM238C9JI98 176 aa16.74■□□□□ 0.27
RABGGTA-202ENST00000399409 LOC107984156A0A0G2JMH3 177 aa16.73■□□□□ 0.27
RABGGTA-202ENST00000399409 ARL17AQ8IVW1 177 aa16.73■□□□□ 0.27
RABGGTA-202ENST00000399409 STHQ8IWL8 128 aa16.73■□□□□ 0.27
RABGGTA-202ENST00000399409 C10orf126Q8N4M7 172 aa16.73■□□□□ 0.27
RABGGTA-202ENST00000399409 TIMM21Q9BVV7 248 aa16.73■□□□□ 0.27
RABGGTA-202ENST00000399409 UBE2D4Q9Y2X8 147 aa16.73■□□□□ 0.27
RABGGTA-202ENST00000399409 PRO1854Q9UHT4 67 aa16.73■□□□□ 0.27
RABGGTA-202ENST00000399409 TINCRA0A1B0GVN0 87 aa16.72■□□□□ 0.27
RABGGTA-202ENST00000399409 NACAE9PAV3 2078 aa16.72■□□□□ 0.27
RABGGTA-202ENST00000399409 IGHV3-64A0A075B6Q5 118 aa16.72■□□□□ 0.27
RABGGTA-202ENST00000399409 IGHV3-30-3P0DP02 117 aa16.72■□□□□ 0.27
RABGGTA-202ENST00000399409 CCL24O00175 119 aa16.71■□□□□ 0.27
RABGGTA-202ENST00000399409 ETDBQ3ZM63 59 aa16.71■□□□□ 0.27
RABGGTA-202ENST00000399409 Q9UF83 564 aa16.71■□□□□ 0.27
RABGGTA-202ENST00000399409 CEMP1Q6PRD7 247 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-202ENST00000399409 XCL2Q9UBD3 114 aa16.71■□□□□ 0.27
RABGGTA-202ENST00000399409 TRBV20-1A0A075B6N2 111 aa16.7■□□□□ 0.26
RABGGTA-202ENST00000399409 PSMB2P49721 201 aa16.7■□□□□ 0.26
RABGGTA-202ENST00000399409 WFDC11Q8NEX6 87 aa16.7■□□□□ 0.26
RABGGTA-202ENST00000399409 SH2D6Q7Z4S9 175 aa16.7■□□□□ 0.26
RABGGTA-202ENST00000399409 CSMD2Q7Z408 3487 aa16.7■□□□□ 0.26
RABGGTA-202ENST00000399409 IGHV1-58A0A0C4DH39 117 aa16.69■□□□□ 0.26
RABGGTA-202ENST00000399409 A0A0J9YXY3 114 aa16.69■□□□□ 0.26
RABGGTA-202ENST00000399409 IL17DQ8TAD2 202 aa16.69■□□□□ 0.26
RABGGTA-202ENST00000399409 A4D1N5 150 aa16.68■□□□□ 0.26
RABGGTA-202ENST00000399409 HIST2H2BDQ6DRA6 164 aa16.68■□□□□ 0.26
RABGGTA-202ENST00000399409 C1orf158Q8N1D5 194 aa16.68■□□□□ 0.26
RABGGTA-202ENST00000399409 A0A0B4J2C4 111 aa16.68■□□□□ 0.26
RABGGTA-202ENST00000399409 CMC4P56277 68 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-202ENST00000399409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-202ENST00000399409 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-202ENST00000399409 IGKV2-29A2NJV5 120 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-202ENST00000399409 AZU1P20160 251 aa16.67■□□□□ 0.26
RABGGTA-202ENST00000399409 ATP6V0E2Q8NHE4 81 aa16.67■□□□□ 0.26
RABGGTA-202ENST00000399409 TEX15Q9BXT5 2789 aa16.67■□□□□ 0.26
RABGGTA-202ENST00000399409 A0A1W2PRX2 142 aa16.67■□□□□ 0.26
RABGGTA-202ENST00000399409 MUSTN1Q8IVN3 82 aa16.67■□□□□ 0.26
RABGGTA-202ENST00000399409 MTURNQ8N3F0 131 aa16.66■□□□□ 0.26
RABGGTA-202ENST00000399409 ESM1Q9NQ30 184 aa16.66■□□□□ 0.26
RABGGTA-202ENST00000399409 CENPEQ02224 2701 aa16.65■□□□□ 0.26
RABGGTA-202ENST00000399409 RNASE13Q5GAN3 156 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-202ENST00000399409 Q6ZUT4 128 aa16.65■□□□□ 0.26
RABGGTA-202ENST00000399409 TMEM263Q8WUH6 116 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-202ENST00000399409 VSIG2Q96IQ7 327 aa16.65■□□□□ 0.26
RABGGTA-202ENST00000399409 TSSC4Q9Y5U2 329 aaPredicted RBP16.65■□□□□ 0.26
RABGGTA-202ENST00000399409 IGHV3-38A0A0C4DH36 116 aa16.65■□□□□ 0.26
RABGGTA-202ENST00000399409 SFTA2Q6UW10 78 aa16.65■□□□□ 0.26
RABGGTA-202ENST00000399409 ABCA12Q86UK0 2595 aa16.64■□□□□ 0.26
RABGGTA-202ENST00000399409 C11orf44Q8N8P7 122 aa16.63■□□□□ 0.25
RABGGTA-202ENST00000399409 GEMIN7Q9H840 131 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-202ENST00000399409 TRAV8-3A0A0A6YYJ7 113 aa16.63■□□□□ 0.25
RABGGTA-202ENST00000399409 IGHV3-33P01772 117 aa16.63■□□□□ 0.25
RABGGTA-202ENST00000399409 NDUFA12Q9UI09 145 aa16.63■□□□□ 0.25
RABGGTA-202ENST00000399409 IGHV3OR16-12A0A075B7B8 117 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 TRGV1A0A0A0MS02 117 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 TCL1BO95988 128 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 SMCPP49901 116 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 TIRAPP58753 221 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 C1QTNF4Q9BXJ3 329 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 C16orf95Q9H693 158 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 ERG28Q9UKR5 140 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 TRBV10-1A0A0K0K1A3 114 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 SCGB1C2P0DMR2 95 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 LITAFQ99732 161 aa16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 CITED2Q99967 270 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-202ENST00000399409 SPANXDQ9BXN6 97 aa16.61■□□□□ 0.25
RABGGTA-202ENST00000399409 SPANXCQ9NY87 97 aa16.61■□□□□ 0.25
RABGGTA-202ENST00000399409 DGAT2L7PQ6IED9 249 aa16.61■□□□□ 0.25
RABGGTA-202ENST00000399409 MYO9AB2RTY4 2548 aa16.59■□□□□ 0.25
RABGGTA-202ENST00000399409 EIF4EBP3O60516 100 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-202ENST00000399409 IGLV5-45A0A087WSX0 123 aa16.59■□□□□ 0.25
RABGGTA-202ENST00000399409 GAGE12HA6NDE8 117 aa16.59■□□□□ 0.25
RABGGTA-202ENST00000399409 RPL36AP83881 106 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-202ENST00000399409 SBSPONQ8IVN8 264 aa16.59■□□□□ 0.25
RABGGTA-202ENST00000399409 RPL36ALQ969Q0 106 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-202ENST00000399409 TRAV4A0A0B4J268 109 aa16.58■□□□□ 0.25
RABGGTA-202ENST00000399409 ADARB2-AS1A8MUL3 147 aa16.58■□□□□ 0.25
RABGGTA-202ENST00000399409 RNASE1P07998 156 aaKnown RBP16.58■□□□□ 0.25
RABGGTA-202ENST00000399409 SPINK8P0C7L1 97 aa16.58■□□□□ 0.25
RABGGTA-202ENST00000399409 ZFAND6Q6FIF0 208 aa16.58■□□□□ 0.25
RABGGTA-202ENST00000399409 ZNF418Q8TF45 676 aaPredicted RBP16.58■□□□□ 0.25
RABGGTA-202ENST00000399409 K7EQD1 137 aa16.58■□□□□ 0.24
RABGGTA-202ENST00000399409 SPATA25Q9BR10 227 aa16.58■□□□□ 0.24
RABGGTA-202ENST00000399409 FOXI1Q12951 378 aa16.57■□□□□ 0.24
RABGGTA-202ENST00000399409 DAZ2Q13117 558 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-202ENST00000399409 DAZ4Q86SG3 579 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-202ENST00000399409 LINC01006Q8NI28 216 aa16.57■□□□□ 0.24
RABGGTA-202ENST00000399409 SIGMAR1Q99720 223 aa16.57■□□□□ 0.24
RABGGTA-202ENST00000399409 DAZ3Q9NR90 486 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms