RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 MT-ATP8P03928 68 aa12.27□□□□□ -0.44
CTDSP2-201ENST00000398073 CITED1Q99966 193 aa12.27□□□□□ -0.44
CTDSP2-201ENST00000398073 TMEM126AQ9H061 195 aa12.27□□□□□ -0.44
CTDSP2-201ENST00000398073 F8WEM9 126 aa12.27□□□□□ -0.45
CTDSP2-201ENST00000398073 GYPEP15421 78 aa12.27□□□□□ -0.45
CTDSP2-201ENST00000398073 HIST2H2BCQ6DN03 193 aa12.27□□□□□ -0.45
CTDSP2-201ENST00000398073 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.45
CTDSP2-201ENST00000398073 MAP6D1Q9H9H5 199 aa12.26□□□□□ -0.45
CTDSP2-201ENST00000398073 ZMAT4Q9H898 229 aa12.26□□□□□ -0.45
CTDSP2-201ENST00000398073 IGHV3-33P01772 117 aa12.26□□□□□ -0.45
CTDSP2-201ENST00000398073 MIR7-3HGQ8N6C7 128 aa12.26□□□□□ -0.45
CTDSP2-201ENST00000398073 UFSP1Q6NVU6 142 aa12.26□□□□□ -0.45
CTDSP2-201ENST00000398073 COX8CQ7Z4L0 72 aa12.26□□□□□ -0.45
CTDSP2-201ENST00000398073 ATOX1O00244 68 aa12.25□□□□□ -0.45
CTDSP2-201ENST00000398073 TMEM263Q8WUH6 116 aaKnown RBP12.25□□□□□ -0.45
CTDSP2-201ENST00000398073 NCOR2Q9Y618 2525 aa12.25□□□□□ -0.45
CTDSP2-201ENST00000398073 CLPSL1A2RUU4 121 aa12.25□□□□□ -0.45
CTDSP2-201ENST00000398073 POLR2KP53803 58 aaKnown RBP12.25□□□□□ -0.45
CTDSP2-201ENST00000398073 Q6ZQT7 251 aa12.25□□□□□ -0.45
CTDSP2-201ENST00000398073 CEP350Q5VT06 3117 aa12.25□□□□□ -0.45
CTDSP2-201ENST00000398073 CDKN2A-AS1Q9UH64 79 aa12.25□□□□□ -0.45
CTDSP2-201ENST00000398073 NKAPP1Q8N9T2 125 aa12.24□□□□□ -0.45
CTDSP2-201ENST00000398073 COX7A2LO14548 114 aa12.24□□□□□ -0.45
CTDSP2-201ENST00000398073 KLLNB2CW77 178 aa12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 IGHV3-30P01768 117 aa12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 IGHV3-30-5P0DP03 117 aa12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 SMIM20Q8N5G0 67 aa12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 SONP18583 2426 aaKnown RBP12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 LECT2O14960 151 aa12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 A0A096LNJ9 63 aa12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 CFAP126Q5VTH2 177 aa12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 TRBV30A0A0K0K1B3 111 aa12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 PYGO1Q9Y3Y4 419 aa12.23□□□□□ -0.45
CTDSP2-201ENST00000398073 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
CTDSP2-201ENST00000398073 TEX49A0A1B0GTD5 131 aa12.22□□□□□ -0.45
CTDSP2-201ENST00000398073 C19orf84I3L1E1 186 aa12.22□□□□□ -0.45
CTDSP2-201ENST00000398073 RBMY1FQ15415 496 aaKnown RBP12.22□□□□□ -0.45
CTDSP2-201ENST00000398073 LINC00643Q86TS7 51 aa12.22□□□□□ -0.45
CTDSP2-201ENST00000398073 LINC00467Q9BRT7 94 aa12.22□□□□□ -0.45
CTDSP2-201ENST00000398073 HIVEP2P31629 2446 aa12.22□□□□□ -0.45
CTDSP2-201ENST00000398073 PIEZO1Q92508 2521 aa12.22□□□□□ -0.45
CTDSP2-201ENST00000398073 RNF183Q96D59 192 aa12.22□□□□□ -0.45
CTDSP2-201ENST00000398073 MYO18BQ8IUG5 2567 aa12.21□□□□□ -0.45
CTDSP2-201ENST00000398073 TRIAP1O43715 76 aa12.21□□□□□ -0.46
CTDSP2-201ENST00000398073 IGKV3D-7A0A0C4DH55 119 aa12.21□□□□□ -0.46
CTDSP2-201ENST00000398073 JMJD7-PLA2G4BH0Y9G9 81 aa12.21□□□□□ -0.46
CTDSP2-201ENST00000398073 HIST2H2BDQ6DRA6 164 aa12.2□□□□□ -0.46
CTDSP2-201ENST00000398073 SPATA25Q9BR10 227 aa12.2□□□□□ -0.46
CTDSP2-201ENST00000398073 MRPL23Q16540 153 aaKnown RBP12.2□□□□□ -0.46
CTDSP2-201ENST00000398073 NDUFV3P56181 108 aaKnown RBP12.19□□□□□ -0.46
CTDSP2-201ENST00000398073 A0A1B0GX51 115 aa12.19□□□□□ -0.46
CTDSP2-201ENST00000398073 IGLV10-54A0A075B6I4 117 aa12.19□□□□□ -0.46
CTDSP2-201ENST00000398073 F8W735 103 aaPredicted RBP12.19□□□□□ -0.46
CTDSP2-201ENST00000398073 TSHBP01222 138 aa12.19□□□□□ -0.46
CTDSP2-201ENST00000398073 PSMG3-AS1Q96PY0 264 aa12.19□□□□□ -0.46
CTDSP2-201ENST00000398073 CXCL5P42830 114 aa12.18□□□□□ -0.46
CTDSP2-201ENST00000398073 TIRAPP58753 221 aa12.18□□□□□ -0.46
CTDSP2-201ENST00000398073 Q6ZTI0 123 aa12.18□□□□□ -0.46
CTDSP2-201ENST00000398073 ATP5G1P05496 136 aa12.17□□□□□ -0.46
CTDSP2-201ENST00000398073 LINC00308Q8TCZ7 52 aa12.17□□□□□ -0.46
CTDSP2-201ENST00000398073 TET2Q6N021 2002 aaPredicted RBP12.17□□□□□ -0.46
CTDSP2-201ENST00000398073 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
CTDSP2-201ENST00000398073 CEP295Q9C0D2 2601 aa12.17□□□□□ -0.46
CTDSP2-201ENST00000398073 NDUFA1O15239 70 aa12.17□□□□□ -0.46
CTDSP2-201ENST00000398073 CRYGDP07320 174 aa12.17□□□□□ -0.46
CTDSP2-201ENST00000398073 PSMB8P28062 276 aa12.17□□□□□ -0.46
CTDSP2-201ENST00000398073 Q9HAA7 133 aa12.16□□□□□ -0.46
CTDSP2-201ENST00000398073 Q6ZS46 218 aa12.16□□□□□ -0.46
CTDSP2-201ENST00000398073 IGIPA6NJ69 53 aa12.16□□□□□ -0.46
CTDSP2-201ENST00000398073 MRGPRG-AS1Q2M3A8 158 aa12.16□□□□□ -0.46
CTDSP2-201ENST00000398073 DEFB114Q30KQ6 69 aa12.15□□□□□ -0.46
CTDSP2-201ENST00000398073 Q6YL49 198 aa12.15□□□□□ -0.46
CTDSP2-201ENST00000398073 TIMM17BO60830 172 aa12.15□□□□□ -0.46
CTDSP2-201ENST00000398073 C9orf66Q5T8R8 295 aa12.14□□□□□ -0.47
CTDSP2-201ENST00000398073 DCANP1Q8TF63 244 aa12.14□□□□□ -0.47
CTDSP2-201ENST00000398073 IGLV1-40P01703 118 aa12.14□□□□□ -0.47
CTDSP2-201ENST00000398073 PSCAO43653 123 aa12.14□□□□□ -0.47
CTDSP2-201ENST00000398073 INSL3P51460 131 aa12.14□□□□□ -0.47
CTDSP2-201ENST00000398073 C10orf99Q6UWK7 81 aa12.14□□□□□ -0.47
CTDSP2-201ENST00000398073 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
CTDSP2-201ENST00000398073 CITED2Q99967 270 aaPredicted RBP12.14□□□□□ -0.47
CTDSP2-201ENST00000398073 SPART-AS1P0CW21 52 aa12.13□□□□□ -0.47
CTDSP2-201ENST00000398073 PROK1P58294 105 aa12.13□□□□□ -0.47
CTDSP2-201ENST00000398073 H3BQ85 93 aa12.13□□□□□ -0.47
CTDSP2-201ENST00000398073 PRO0255Q9UI72 69 aa12.13□□□□□ -0.47
CTDSP2-201ENST00000398073 HIVEP3Q5T1R4 2406 aa12.13□□□□□ -0.47
CTDSP2-201ENST00000398073 TMEM256-PLSCR3K7ERE1 68 aa12.12□□□□□ -0.47
CTDSP2-201ENST00000398073 UBE2D1P51668 147 aa12.12□□□□□ -0.47
CTDSP2-201ENST00000398073 CAMK2N2Q96S95 79 aa12.12□□□□□ -0.47
CTDSP2-201ENST00000398073 ADAMTS20P59510 1910 aa12.11□□□□□ -0.47
CTDSP2-201ENST00000398073 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
CTDSP2-201ENST00000398073 IGLV2-18A0A075B6J9 118 aa12.11□□□□□ -0.47
CTDSP2-201ENST00000398073 C3orf56Q8N813 242 aa12.11□□□□□ -0.47
CTDSP2-201ENST00000398073 H7C423 109 aa12.1□□□□□ -0.47
CTDSP2-201ENST00000398073 PRB1P04280 392 aa12.1□□□□□ -0.47
CTDSP2-201ENST00000398073 SPAG11BQ08648 103 aa12.1□□□□□ -0.47
CTDSP2-201ENST00000398073 CDSNQ15517 529 aa12.1□□□□□ -0.47
CTDSP2-201ENST00000398073 C1orf43Q9BWL3 253 aa12.1□□□□□ -0.47
CTDSP2-201ENST00000398073 DEFB121Q5J5C9 76 aa12.1□□□□□ -0.47
CTDSP2-201ENST00000398073 XGP55808 180 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms