RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 FAM231CP0DMU5 169 aa8.8□□□□□ -1
ITGB1-202ENST00000396033 GTSCR1Q86UQ5 136 aa8.8□□□□□ -1
ITGB1-202ENST00000396033 EDA2RQ9HAV5 297 aa8.8□□□□□ -1
ITGB1-202ENST00000396033 SPANXB1Q9NS25 103 aaPredicted RBP8.8□□□□□ -1
ITGB1-202ENST00000396033 SH2D6Q7Z4S9 175 aa8.79□□□□□ -1
ITGB1-202ENST00000396033 I3L3M4 83 aa8.79□□□□□ -1
ITGB1-202ENST00000396033 RHODO00212 210 aa8.79□□□□□ -1
ITGB1-202ENST00000396033 RHOHQ15669 191 aa8.79□□□□□ -1
ITGB1-202ENST00000396033 TSHBP01222 138 aa8.78□□□□□ -1
ITGB1-202ENST00000396033 GIG44P09565 113 aaPredicted RBP8.78□□□□□ -1
ITGB1-202ENST00000396033 TRGV1A0A0A0MS02 117 aa8.78□□□□□ -1
ITGB1-202ENST00000396033 PRSS29PA6NIE9 313 aa8.78□□□□□ -1
ITGB1-202ENST00000396033 Q6ZSN1 163 aa8.78□□□□□ -1
ITGB1-202ENST00000396033 GTF2H5Q6ZYL4 71 aa8.78□□□□□ -1
ITGB1-202ENST00000396033 IL17DQ8TAD2 202 aa8.78□□□□□ -1
ITGB1-202ENST00000396033 PRO0461Q9UI25 63 aa8.78□□□□□ -1
ITGB1-202ENST00000396033 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
ITGB1-202ENST00000396033 NACAE9PAV3 2078 aa8.78□□□□□ -1
ITGB1-202ENST00000396033 IGIPA6NJ69 53 aa8.77□□□□□ -1
ITGB1-202ENST00000396033 RS1O15537 224 aa8.77□□□□□ -1
ITGB1-202ENST00000396033 HSD52Q0P140 79 aa8.77□□□□□ -1
ITGB1-202ENST00000396033 TMEM263Q8WUH6 116 aaKnown RBP8.77□□□□□ -1
ITGB1-202ENST00000396033 TMEM141Q96I45 108 aa8.77□□□□□ -1.01
ITGB1-202ENST00000396033 TIMM17AQ99595 171 aa8.77□□□□□ -1.01
ITGB1-202ENST00000396033 TRAV26-1A0A087WT03 109 aa8.76□□□□□ -1.01
ITGB1-202ENST00000396033 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
ITGB1-202ENST00000396033 SAMD5Q5TGI4 173 aa8.76□□□□□ -1.01
ITGB1-202ENST00000396033 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.76□□□□□ -1.01
ITGB1-202ENST00000396033 C1QTNF4Q9BXJ3 329 aa8.76□□□□□ -1.01
ITGB1-202ENST00000396033 SPATA25Q9BR10 227 aa8.76□□□□□ -1.01
ITGB1-202ENST00000396033 IGHV3-53P01767 116 aa8.75□□□□□ -1.01
ITGB1-202ENST00000396033 SIGMAR1Q99720 223 aa8.75□□□□□ -1.01
ITGB1-202ENST00000396033 RPL24P83731 157 aaKnown RBP8.75□□□□□ -1.01
ITGB1-202ENST00000396033 PMVKQ15126 192 aa8.75□□□□□ -1.01
ITGB1-202ENST00000396033 C20orf203Q8NBC4 194 aa8.75□□□□□ -1.01
ITGB1-202ENST00000396033 Q9UF83 564 aa8.75□□□□□ -1.01
ITGB1-202ENST00000396033 NOTCH3Q9UM47 2321 aa8.75□□□□□ -1.01
ITGB1-202ENST00000396033 Q6ZTI0 123 aa8.74□□□□□ -1.01
ITGB1-202ENST00000396033 SIVA1O15304 175 aa8.74□□□□□ -1.01
ITGB1-202ENST00000396033 MAPKAPK5-AS1Q8N8E1 139 aa8.74□□□□□ -1.01
ITGB1-202ENST00000396033 C16orf74Q96GX8 76 aa8.74□□□□□ -1.01
ITGB1-202ENST00000396033 NOP10Q9NPE3 64 aaKnown RBP8.74□□□□□ -1.01
ITGB1-202ENST00000396033 H3BMG7 143 aa8.74□□□□□ -1.01
ITGB1-202ENST00000396033 CRYBA4P53673 196 aa8.74□□□□□ -1.01
ITGB1-202ENST00000396033 SPATA3Q8NHX4 192 aa8.74□□□□□ -1.01
ITGB1-202ENST00000396033 A6NDN8 102 aa8.73□□□□□ -1.01
ITGB1-202ENST00000396033 C9orf66Q5T8R8 295 aa8.73□□□□□ -1.01
ITGB1-202ENST00000396033 EMP1P54849 157 aa8.73□□□□□ -1.01
ITGB1-202ENST00000396033 CSNK1G2-AS1Q8NCQ2 148 aa8.73□□□□□ -1.01
ITGB1-202ENST00000396033 OR5A1Q8NGJ0 315 aa8.73□□□□□ -1.01
ITGB1-202ENST00000396033 DNAJC30Q96LL9 226 aa8.73□□□□□ -1.01
ITGB1-202ENST00000396033 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
ITGB1-202ENST00000396033 ZNF479Q96JC4 524 aa8.73□□□□□ -1.01
ITGB1-202ENST00000396033 CDIP1Q9H305 208 aa8.73□□□□□ -1.01
ITGB1-202ENST00000396033 RRN3P1Q2M238 152 aa8.72□□□□□ -1.01
ITGB1-202ENST00000396033 ETDBQ3ZM63 59 aa8.72□□□□□ -1.01
ITGB1-202ENST00000396033 OPRPNQ99935 248 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-202ENST00000396033 CITED1Q99966 193 aa8.72□□□□□ -1.01
ITGB1-202ENST00000396033 IGLV4-69A0A075B6H9 119 aa8.72□□□□□ -1.01
ITGB1-202ENST00000396033 E9PLD3 99 aa8.72□□□□□ -1.01
ITGB1-202ENST00000396033 DAZ2Q13117 558 aaKnown RBP8.72□□□□□ -1.01
ITGB1-202ENST00000396033 NFE4Q86UQ8 179 aa8.72□□□□□ -1.01
ITGB1-202ENST00000396033 TRAV4A0A0B4J268 109 aa8.71□□□□□ -1.01
ITGB1-202ENST00000396033 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.01
ITGB1-202ENST00000396033 C11orf86A6NJI1 115 aa8.71□□□□□ -1.01
ITGB1-202ENST00000396033 SCGB1A1P11684 91 aa8.71□□□□□ -1.01
ITGB1-202ENST00000396033 PAPPA-AS1Q5QFB9 102 aa8.71□□□□□ -1.02
ITGB1-202ENST00000396033 OR11H2Q8NH07 326 aa8.71□□□□□ -1.02
ITGB1-202ENST00000396033 TENM1Q9UKZ4 2725 aa8.71□□□□□ -1.02
ITGB1-202ENST00000396033 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.02
ITGB1-202ENST00000396033 VWFP04275 2813 aa8.71□□□□□ -1.02
ITGB1-202ENST00000396033 TRBV25-1A0A075B6N4 114 aa8.7□□□□□ -1.02
ITGB1-202ENST00000396033 GCSHP23434 173 aa8.7□□□□□ -1.02
ITGB1-202ENST00000396033 FLNBO75369 2602 aaKnown RBP8.7□□□□□ -1.02
ITGB1-202ENST00000396033 IGLV4-3A0A075B6K6 122 aa8.7□□□□□ -1.02
ITGB1-202ENST00000396033 K7EQD1 137 aa8.7□□□□□ -1.02
ITGB1-202ENST00000396033 GAGE7O76087 117 aa8.7□□□□□ -1.02
ITGB1-202ENST00000396033 GAGE12FP0CL80 117 aa8.7□□□□□ -1.02
ITGB1-202ENST00000396033 GAGE12GP0CL81 117 aa8.7□□□□□ -1.02
ITGB1-202ENST00000396033 GAGE12IP0CL82 117 aa8.7□□□□□ -1.02
ITGB1-202ENST00000396033 FABP2P12104 132 aa8.7□□□□□ -1.02
ITGB1-202ENST00000396033 F8P00451 2351 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 TRGV2A0A075B6R0 118 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 IGLL5B9A064 214 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 ZNRF2Q8NHG8 242 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 CHAC1Q9BUX1 264 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 PRADC1Q9BSG0 188 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 CHCHD7Q9BUK0 85 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 NHP2Q9NX24 153 aaKnown RBP8.69□□□□□ -1.02
ITGB1-202ENST00000396033 HIGD1BQ9P298 99 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 ATRQ13535 2644 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 CKS1BP61024 79 aa8.69□□□□□ -1.02
ITGB1-202ENST00000396033 HERVK_113P61574 105 aa8.68□□□□□ -1.02
ITGB1-202ENST00000396033 TM2D2Q9BX73 214 aa8.68□□□□□ -1.02
ITGB1-202ENST00000396033 VCX2Q9H322 139 aa8.68□□□□□ -1.02
ITGB1-202ENST00000396033 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.68□□□□□ -1.02
ITGB1-202ENST00000396033 IGKV2-29A2NJV5 120 aaPredicted RBP8.68□□□□□ -1.02
ITGB1-202ENST00000396033 SMIM13P0DJ93 91 aa8.68□□□□□ -1.02
ITGB1-202ENST00000396033 TMEM170BQ5T4T1 132 aa8.68□□□□□ -1.02
ITGB1-202ENST00000396033 PYGO1Q9Y3Y4 419 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms