RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TRAV26-2A0A0B4J265 109 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 IGKV3D-20A0A0C4DH25 116 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 TRBV7-7A0A0K0K1E9 115 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 FAM236AA0A1B0GUQ0 79 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 FAM236BA0A1B0GV22 79 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 DUSP14O95147 198 aaKnown RBP3.96□□□□□ -1.78
VPS41-203ENST00000395969 Q6ZS46 218 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 C20orf173Q96LM9 149 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 SCGB3A1Q96QR1 104 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 AMELXQ99217 191 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 S4R3C0 116 aa3.96□□□□□ -1.78
VPS41-203ENST00000395969 PDZD2O15018 2839 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 TRAV8-4A0A0B4J246 113 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 TRBV6-5A0A0K0K1A5 114 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 M0R2P5 195 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 IGHV3-33P01772 117 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 CRYGDP07320 174 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 PRB3Q04118 309 aaPredicted RBP3.95□□□□□ -1.78
VPS41-203ENST00000395969 CEMP1Q6PRD7 247 aaPredicted RBP3.95□□□□□ -1.78
VPS41-203ENST00000395969 TMEM263Q8WUH6 116 aaKnown RBP3.95□□□□□ -1.78
VPS41-203ENST00000395969 KIF25-AS1Q9Y6Z4 181 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 AKAP9Q99996 3911 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 IGLV4-69A0A075B6H9 119 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 A0A0B4J2C4 111 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 A0A0J9YX75 114 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 FAM240AA0A1B0GVK7 77 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 F5H768 121 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 PPP1R17O96001 155 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 HERVK_113P63121 156 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 PMVKQ15126 192 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 C4orf26Q17RF5 130 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 C6orf226Q5I0X4 101 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 DEFB121Q5J5C9 76 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 IGFL4Q6B9Z1 124 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 TMEM219Q86XT9 240 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 DNAJC30Q96LL9 226 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 C11orf21Q9P2W6 132 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 PKIGQ9Y2B9 76 aa3.95□□□□□ -1.78
VPS41-203ENST00000395969 MAP1AP78559 2803 aaPredicted RBP3.95□□□□□ -1.78
VPS41-203ENST00000395969 TRGV11A0A075B6L2 103 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 IGHV3-64A0A075B6Q5 118 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 IGHV3OR16-8A0A075B7F1 116 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 TRAV21A0A0B4J279 112 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 DNAJC9-AS1A6NH13 148 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 ADARB2-AS1A8MUL3 147 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 NSUN5P1Q3KNT7 163 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 Q6ZSV7 163 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 CFAP46Q8IYW2 2715 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 TRBV10-2A0A0K0K1G8 114 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 TRBV12-3P01733 135 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 TSPEAR-AS2P59090 65 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 PAPPA-AS1Q5QFB9 102 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 MDFIQ99750 246 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 RHPN1-AS1Q9BWJ2 59 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 C11orf86A6NJI1 115 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 F5H697 171 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 GYPEP15421 78 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 HERVK_113P61574 105 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 SUMO2P61956 95 aaKnown RBP3.94□□□□□ -1.78
VPS41-203ENST00000395969 ATXN8Q156A1 80 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 C2orf66Q6UXQ4 117 aa3.94□□□□□ -1.78
VPS41-203ENST00000395969 ASH1LQ9NR48 2969 aaKnown RBP3.93□□□□□ -1.78
VPS41-203ENST00000395969 TRAV12-3A0A0B4J271 114 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 H3BMM0 161 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 TSHBP01222 138 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 PROK1P58294 105 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 LINC00315P59091 139 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 NPC2P61916 151 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 BEAN1Q3B7T3 259 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 LINC01561Q8N1V8 128 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 UBE2WQ96B02 151 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 TRBV30A0A0K0K1B3 111 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 PRAC2D3DTV9 90 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 LCE2AQ5TA79 106 aaPredicted RBP3.93□□□□□ -1.78
VPS41-203ENST00000395969 KIR2DL5BQ8NHK3 375 aa3.93□□□□□ -1.78
VPS41-203ENST00000395969 ZNF22P17026 224 aaPredicted RBP3.92□□□□□ -1.78
VPS41-203ENST00000395969 HOXD3P31249 432 aaPredicted RBP3.92□□□□□ -1.78
VPS41-203ENST00000395969 DSCR8Q96T75 97 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 SPANXDQ9BXN6 97 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 IMUPQ9GZP8 106 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 ESM1Q9NQ30 184 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 IGF2RP11717 2491 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 CEP295Q9C0D2 2601 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 IGHV3-35A0A0C4DH35 117 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 IGIPA6NJ69 53 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 PRYO14603 147 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 WFDC11Q8NEX6 87 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 LINC00527Q9UJ94 153 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 A0A1B0GX51 115 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 hADV29S1A0JD25 119 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 H3BT86 120 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 DEFB114Q30KQ6 69 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 C14orf178Q8N769 122 aaPredicted RBP3.92□□□□□ -1.78
VPS41-203ENST00000395969 TMEM101Q96IK0 257 aa3.92□□□□□ -1.78
VPS41-203ENST00000395969 H7C423 109 aa3.91□□□□□ -1.78
VPS41-203ENST00000395969 RNASE3P12724 160 aaKnown RBP3.91□□□□□ -1.78
VPS41-203ENST00000395969 SPANXN1Q5VSR9 72 aa3.91□□□□□ -1.78
VPS41-203ENST00000395969 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.91□□□□□ -1.78
VPS41-203ENST00000395969 J3QQQ9 107 aa3.91□□□□□ -1.78
VPS41-203ENST00000395969 TRIAP1O43715 76 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms