RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 OCIAD2Q56VL3 154 aa8.21□□□□□ -1.1
RAE1-203ENST00000395841 CFAP126Q5VTH2 177 aa8.21□□□□□ -1.1
RAE1-203ENST00000395841 PLEKHB2Q96CS7 222 aa8.21□□□□□ -1.1
RAE1-203ENST00000395841 OPRPNQ99935 248 aaPredicted RBP8.21□□□□□ -1.1
RAE1-203ENST00000395841 TNFRSF18Q9Y5U5 241 aa8.21□□□□□ -1.1
RAE1-203ENST00000395841 IGLL5B9A064 214 aa8.2□□□□□ -1.1
RAE1-203ENST00000395841 IGLV4-3A0A075B6K6 122 aa8.2□□□□□ -1.1
RAE1-203ENST00000395841 RHODO00212 210 aa8.2□□□□□ -1.1
RAE1-203ENST00000395841 BEAN1Q3B7T3 259 aa8.2□□□□□ -1.1
RAE1-203ENST00000395841 PYGO1Q9Y3Y4 419 aa8.2□□□□□ -1.1
RAE1-203ENST00000395841 STHQ8IWL8 128 aa8.19□□□□□ -1.1
RAE1-203ENST00000395841 VCX2Q9H322 139 aa8.19□□□□□ -1.1
RAE1-203ENST00000395841 LY6G6DO95868 133 aa8.19□□□□□ -1.1
RAE1-203ENST00000395841 Q6ZSN1 163 aa8.19□□□□□ -1.1
RAE1-203ENST00000395841 TSSC4Q9Y5U2 329 aaPredicted RBP8.19□□□□□ -1.1
RAE1-203ENST00000395841 NSD1Q96L73 2696 aaPredicted RBP8.19□□□□□ -1.1
RAE1-203ENST00000395841 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
RAE1-203ENST00000395841 A6NJY4 79 aa8.18□□□□□ -1.1
RAE1-203ENST00000395841 RNASE1P07998 156 aaKnown RBP8.18□□□□□ -1.1
RAE1-203ENST00000395841 TSPEAR-AS2P59090 65 aa8.18□□□□□ -1.1
RAE1-203ENST00000395841 ZNF479Q96JC4 524 aa8.18□□□□□ -1.1
RAE1-203ENST00000395841 CITED2Q99967 270 aaPredicted RBP8.18□□□□□ -1.1
RAE1-203ENST00000395841 C16orf95Q9H693 158 aa8.18□□□□□ -1.1
RAE1-203ENST00000395841 MRPL16Q9NX20 251 aaKnown RBP8.18□□□□□ -1.1
RAE1-203ENST00000395841 TEP1Q99973 2627 aaKnown RBP8.18□□□□□ -1.1
RAE1-203ENST00000395841 A0A0J9YY99 117 aa8.18□□□□□ -1.1
RAE1-203ENST00000395841 J3QQQ9 107 aa8.18□□□□□ -1.1
RAE1-203ENST00000395841 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
RAE1-203ENST00000395841 XCL2Q9UBD3 114 aa8.18□□□□□ -1.1
RAE1-203ENST00000395841 TENM1Q9UKZ4 2725 aa8.18□□□□□ -1.1
RAE1-203ENST00000395841 TMEM223A0PJW6 202 aa8.17□□□□□ -1.1
RAE1-203ENST00000395841 RS1O15537 224 aa8.17□□□□□ -1.1
RAE1-203ENST00000395841 IGHV3-53P01767 116 aa8.17□□□□□ -1.1
RAE1-203ENST00000395841 CRYBA4P53673 196 aa8.17□□□□□ -1.1
RAE1-203ENST00000395841 LINC01006Q8NI28 216 aa8.17□□□□□ -1.1
RAE1-203ENST00000395841 DNAJC30Q96LL9 226 aa8.17□□□□□ -1.1
RAE1-203ENST00000395841 VWFP04275 2813 aa8.17□□□□□ -1.1
RAE1-203ENST00000395841 K7ERU9 68 aa8.17□□□□□ -1.1
RAE1-203ENST00000395841 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
RAE1-203ENST00000395841 RRN3P1Q2M238 152 aa8.17□□□□□ -1.1
RAE1-203ENST00000395841 LEPROTO15243 131 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 LGALS3P17931 250 aaKnown RBP8.16□□□□□ -1.1
RAE1-203ENST00000395841 AZU1P20160 251 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 AMELXQ99217 191 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 SPANXB1Q9NS25 103 aaPredicted RBP8.16□□□□□ -1.1
RAE1-203ENST00000395841 Q9UF83 564 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 A0A0J9YXV3 536 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 INAFM1C9JVW0 142 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 C2CD3Q4AC94 2353 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 RNF151Q2KHN1 245 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 SLC25A29Q8N8R3 303 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 IL17DQ8TAD2 202 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 FAM104AQ969W3 186 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 CHCHD7Q9BUK0 85 aa8.16□□□□□ -1.1
RAE1-203ENST00000395841 UBE2D1P51668 147 aa8.15□□□□□ -1.1
RAE1-203ENST00000395841 SVIPQ8NHG7 77 aa8.15□□□□□ -1.1
RAE1-203ENST00000395841 SPANXA1Q9NS26 97 aa8.15□□□□□ -1.1
RAE1-203ENST00000395841 NOTCH3Q9UM47 2321 aa8.15□□□□□ -1.11
RAE1-203ENST00000395841 CMC4P56277 68 aaPredicted RBP8.15□□□□□ -1.11
RAE1-203ENST00000395841 IGHV3OR16-12A0A075B7B8 117 aa8.14□□□□□ -1.11
RAE1-203ENST00000395841 MRPS36P82909 103 aaKnown RBP8.14□□□□□ -1.11
RAE1-203ENST00000395841 IGHV3-30P01768 117 aa8.14□□□□□ -1.11
RAE1-203ENST00000395841 IGHV3-30-5P0DP03 117 aa8.14□□□□□ -1.11
RAE1-203ENST00000395841 CEMP1Q6PRD7 247 aaPredicted RBP8.14□□□□□ -1.11
RAE1-203ENST00000395841 UBE2D4Q9Y2X8 147 aa8.14□□□□□ -1.11
RAE1-203ENST00000395841 F8P00451 2351 aa8.14□□□□□ -1.11
RAE1-203ENST00000395841 PGPEP1Q9NXJ5 209 aa8.13□□□□□ -1.11
RAE1-203ENST00000395841 SAP30O75446 220 aa8.13□□□□□ -1.11
RAE1-203ENST00000395841 ZNF418Q8TF45 676 aaPredicted RBP8.13□□□□□ -1.11
RAE1-203ENST00000395841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.12□□□□□ -1.11
RAE1-203ENST00000395841 TRGV1A0A0A0MS02 117 aa8.12□□□□□ -1.11
RAE1-203ENST00000395841 IGKV2-29A2NJV5 120 aaPredicted RBP8.12□□□□□ -1.11
RAE1-203ENST00000395841 IGHV3-64A0A075B6Q5 118 aa8.12□□□□□ -1.11
RAE1-203ENST00000395841 IGHV3-38A0A0C4DH36 116 aa8.12□□□□□ -1.11
RAE1-203ENST00000395841 F8W1H4 67 aa8.12□□□□□ -1.11
RAE1-203ENST00000395841 TMEM263Q8WUH6 116 aaKnown RBP8.12□□□□□ -1.11
RAE1-203ENST00000395841 FAM110AQ9BQ89 295 aa8.12□□□□□ -1.11
RAE1-203ENST00000395841 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
RAE1-203ENST00000395841 IGLV1-51P01701 117 aa8.11□□□□□ -1.11
RAE1-203ENST00000395841 HILS1P60008 231 aa8.11□□□□□ -1.11
RAE1-203ENST00000395841 VPS25Q9BRG1 176 aa8.11□□□□□ -1.11
RAE1-203ENST00000395841 TIMM21Q9BVV7 248 aa8.11□□□□□ -1.11
RAE1-203ENST00000395841 ATRQ13535 2644 aa8.11□□□□□ -1.11
RAE1-203ENST00000395841 TRRAPQ9Y4A5 3859 aa8.11□□□□□ -1.11
RAE1-203ENST00000395841 RNASE13Q5GAN3 156 aaKnown RBP8.11□□□□□ -1.11
RAE1-203ENST00000395841 NDUFA11Q86Y39 141 aa8.11□□□□□ -1.11
RAE1-203ENST00000395841 H3BMG7 143 aa8.1□□□□□ -1.11
RAE1-203ENST00000395841 APOMO95445 188 aa8.1□□□□□ -1.11
RAE1-203ENST00000395841 IGHV3-30-3P0DP02 117 aa8.1□□□□□ -1.11
RAE1-203ENST00000395841 G3V4G9 280 aa8.1□□□□□ -1.11
RAE1-203ENST00000395841 NDUFA7O95182 113 aa8.1□□□□□ -1.11
RAE1-203ENST00000395841 TSPAN13O95857 204 aa8.1□□□□□ -1.11
RAE1-203ENST00000395841 Q6ZUT4 128 aa8.1□□□□□ -1.11
RAE1-203ENST00000395841 TRAV4A0A0B4J268 109 aa8.09□□□□□ -1.11
RAE1-203ENST00000395841 TRBV10-1A0A0K0K1A3 114 aa8.09□□□□□ -1.11
RAE1-203ENST00000395841 ADARB2-AS1A8MUL3 147 aa8.09□□□□□ -1.11
RAE1-203ENST00000395841 GIG44P09565 113 aaPredicted RBP8.09□□□□□ -1.11
RAE1-203ENST00000395841 CFC1BP0CG36 223 aa8.09□□□□□ -1.11
RAE1-203ENST00000395841 CFC1P0CG37 223 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms