RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 BAALCQ8WXS3 180 aa10.79□□□□□ -0.68
SCAF11-204ENST00000395454 TMEM141Q96I45 108 aa10.79□□□□□ -0.68
SCAF11-204ENST00000395454 HUWE1Q7Z6Z7 4374 aaKnown RBP10.79□□□□□ -0.68
SCAF11-204ENST00000395454 F8VRH5 84 aa10.78□□□□□ -0.68
SCAF11-204ENST00000395454 OVOL2Q9BRP0 275 aa10.78□□□□□ -0.68
SCAF11-204ENST00000395454 RETNQ9HD89 108 aa10.78□□□□□ -0.68
SCAF11-204ENST00000395454 MRPL35Q9NZE8 188 aaKnown RBP10.78□□□□□ -0.68
SCAF11-204ENST00000395454 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
SCAF11-204ENST00000395454 DLEU1O43261 78 aa10.78□□□□□ -0.68
SCAF11-204ENST00000395454 P0DMU3 169 aa10.78□□□□□ -0.68
SCAF11-204ENST00000395454 FAM231AP0DMU4 169 aa10.78□□□□□ -0.68
SCAF11-204ENST00000395454 FAM231CP0DMU5 169 aa10.78□□□□□ -0.68
SCAF11-204ENST00000395454 STPG4Q8N801 248 aa10.77□□□□□ -0.69
SCAF11-204ENST00000395454 C20orf203Q8NBC4 194 aa10.77□□□□□ -0.69
SCAF11-204ENST00000395454 RNF183Q96D59 192 aa10.77□□□□□ -0.69
SCAF11-204ENST00000395454 IGHV3-73A0A0B4J1V6 119 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 TRAV4A0A0B4J268 109 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 BOD1L2Q8IYS8 172 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 OR11H2Q8NH07 326 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 SPATA25Q9BR10 227 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 TM2D3Q9BRN9 247 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 TENM3Q9P273 2699 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 TRGV1A0A0A0MS02 117 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 CIDEAO60543 219 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 Q6ZTI0 123 aa10.76□□□□□ -0.69
SCAF11-204ENST00000395454 RPL39P62891 51 aaKnown RBP10.75□□□□□ -0.69
SCAF11-204ENST00000395454 RRN3P1Q2M238 152 aa10.75□□□□□ -0.69
SCAF11-204ENST00000395454 TNFRSF18Q9Y5U5 241 aa10.75□□□□□ -0.69
SCAF11-204ENST00000395454 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
SCAF11-204ENST00000395454 NPSP0C0P6 89 aa10.74□□□□□ -0.69
SCAF11-204ENST00000395454 OR4C5Q8NGB2 326 aa10.74□□□□□ -0.69
SCAF11-204ENST00000395454 TP73-AS1Q9UF72 201 aa10.74□□□□□ -0.69
SCAF11-204ENST00000395454 CHTOPQ9Y3Y2 248 aaKnown RBP10.74□□□□□ -0.69
SCAF11-204ENST00000395454 PRSS29PA6NIE9 313 aa10.74□□□□□ -0.69
SCAF11-204ENST00000395454 C2orf91Q6ZV80 131 aa10.74□□□□□ -0.69
SCAF11-204ENST00000395454 Q9UF83 564 aa10.74□□□□□ -0.69
SCAF11-204ENST00000395454 ZC2HC1BQ5TFG8 222 aa10.73□□□□□ -0.69
SCAF11-204ENST00000395454 NOP10Q9NPE3 64 aaKnown RBP10.73□□□□□ -0.69
SCAF11-204ENST00000395454 PYGO1Q9Y3Y4 419 aa10.73□□□□□ -0.69
SCAF11-204ENST00000395454 X6R8D5 127 aa10.73□□□□□ -0.69
SCAF11-204ENST00000395454 PMVKQ15126 192 aa10.72□□□□□ -0.69
SCAF11-204ENST00000395454 LINC00612Q8N6U2 182 aa10.72□□□□□ -0.69
SCAF11-204ENST00000395454 ZNF479Q96JC4 524 aa10.72□□□□□ -0.69
SCAF11-204ENST00000395454 SIVA1O15304 175 aa10.72□□□□□ -0.69
SCAF11-204ENST00000395454 CST9LQ9H4G1 147 aa10.72□□□□□ -0.69
SCAF11-204ENST00000395454 IGLV4-69A0A075B6H9 119 aa10.71□□□□□ -0.69
SCAF11-204ENST00000395454 IGKV2D-26A0A0A0MRZ7 120 aa10.71□□□□□ -0.69
SCAF11-204ENST00000395454 SMIM9A6NGZ8 99 aa10.71□□□□□ -0.69
SCAF11-204ENST00000395454 CRYBA4P53673 196 aa10.71□□□□□ -0.69
SCAF11-204ENST00000395454 NHLRC4P0CG21 123 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-204ENST00000395454 MIFP14174 115 aa10.7□□□□□ -0.7
SCAF11-204ENST00000395454 PAPPA-AS1Q5QFB9 102 aa10.7□□□□□ -0.7
SCAF11-204ENST00000395454 CHCHD7Q9BUK0 85 aa10.7□□□□□ -0.7
SCAF11-204ENST00000395454 TGP01266 2768 aa10.7□□□□□ -0.7
SCAF11-204ENST00000395454 K7EQD1 137 aa10.7□□□□□ -0.7
SCAF11-204ENST00000395454 DEFB4AO15263 64 aa10.7□□□□□ -0.7
SCAF11-204ENST00000395454 TRBV7-3A0A075B6L6 115 aa10.69□□□□□ -0.7
SCAF11-204ENST00000395454 EMP1P54849 157 aa10.69□□□□□ -0.7
SCAF11-204ENST00000395454 PCP2Q8IVA1 136 aa10.69□□□□□ -0.7
SCAF11-204ENST00000395454 DEFB104AQ8WTQ1 72 aa10.69□□□□□ -0.7
SCAF11-204ENST00000395454 FAM104AQ969W3 186 aa10.69□□□□□ -0.7
SCAF11-204ENST00000395454 IGHV4-28A0A0C4DH34 117 aa10.68□□□□□ -0.7
SCAF11-204ENST00000395454 Q8NAQ8 132 aa10.68□□□□□ -0.7
SCAF11-204ENST00000395454 IGLV4-3A0A075B6K6 122 aa10.68□□□□□ -0.7
SCAF11-204ENST00000395454 TRBV6-4A0A1B0GX49 114 aa10.68□□□□□ -0.7
SCAF11-204ENST00000395454 NMUP48645 174 aa10.68□□□□□ -0.7
SCAF11-204ENST00000395454 COL5A1-AS1Q5SY13 56 aa10.68□□□□□ -0.7
SCAF11-204ENST00000395454 NFE4Q86UQ8 179 aa10.68□□□□□ -0.7
SCAF11-204ENST00000395454 SLC25A29Q8N8R3 303 aa10.68□□□□□ -0.7
SCAF11-204ENST00000395454 SPANXA1Q9NS26 97 aa10.68□□□□□ -0.7
SCAF11-204ENST00000395454 UBE2D3P61077 147 aa10.67□□□□□ -0.7
SCAF11-204ENST00000395454 UBE2D2P62837 147 aa10.67□□□□□ -0.7
SCAF11-204ENST00000395454 HIGD1BQ9P298 99 aa10.67□□□□□ -0.7
SCAF11-204ENST00000395454 STAB2Q8WWQ8 2551 aa10.67□□□□□ -0.7
SCAF11-204ENST00000395454 A0A1B0GV90 55 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 C11orf86A6NJI1 115 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 RPL36AP83881 106 aaKnown RBP10.66□□□□□ -0.7
SCAF11-204ENST00000395454 COTL1Q14019 142 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
SCAF11-204ENST00000395454 RPL36ALQ969Q0 106 aaKnown RBP10.66□□□□□ -0.7
SCAF11-204ENST00000395454 AMELXQ99217 191 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
SCAF11-204ENST00000395454 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 E9PLD3 99 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 GAGE7O76087 117 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 MPV17L2Q567V2 206 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 BVES-AS1Q5T3Y7 98 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 TIMM21Q9BVV7 248 aa10.66□□□□□ -0.7
SCAF11-204ENST00000395454 TRGV2A0A075B6R0 118 aa10.65□□□□□ -0.7
SCAF11-204ENST00000395454 A0A0J9YWU9 116 aa10.65□□□□□ -0.7
SCAF11-204ENST00000395454 HINT1P49773 126 aaPredicted RBP10.65□□□□□ -0.7
SCAF11-204ENST00000395454 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
SCAF11-204ENST00000395454 UBE2D4Q9Y2X8 147 aa10.65□□□□□ -0.7
SCAF11-204ENST00000395454 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
SCAF11-204ENST00000395454 FHL2Q14192 279 aa10.64□□□□□ -0.71
SCAF11-204ENST00000395454 BATFQ16520 125 aa10.64□□□□□ -0.71
SCAF11-204ENST00000395454 OPRPNQ99935 248 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms