RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 PRM2P04554 102 aa12.07□□□□□ -0.48
EFEMP1-202ENST00000394555 Q6Q795 121 aa12.07□□□□□ -0.48
EFEMP1-202ENST00000394555 NACAE9PAV3 2078 aa12.06□□□□□ -0.48
EFEMP1-202ENST00000394555 A0A0U1RRA0 63 aa12.06□□□□□ -0.48
EFEMP1-202ENST00000394555 MEIG1Q5JSS6 88 aa12.06□□□□□ -0.48
EFEMP1-202ENST00000394555 SNRPD3P62318 126 aaKnown RBP12.05□□□□□ -0.48
EFEMP1-202ENST00000394555 MRPS36P82909 103 aaKnown RBP12.05□□□□□ -0.48
EFEMP1-202ENST00000394555 MIAQ16674 131 aa12.05□□□□□ -0.48
EFEMP1-202ENST00000394555 FAM104AQ969W3 186 aa12.05□□□□□ -0.48
EFEMP1-202ENST00000394555 HERV-K104P63124 156 aa12.05□□□□□ -0.48
EFEMP1-202ENST00000394555 TRGV11A0A075B6L2 103 aa12.04□□□□□ -0.48
EFEMP1-202ENST00000394555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.04□□□□□ -0.48
EFEMP1-202ENST00000394555 IGKV2-29A2NJV5 120 aaPredicted RBP12.04□□□□□ -0.48
EFEMP1-202ENST00000394555 VSIG2Q96IQ7 327 aa12.04□□□□□ -0.48
EFEMP1-202ENST00000394555 TNFRSF18Q9Y5U5 241 aa12.04□□□□□ -0.48
EFEMP1-202ENST00000394555 H3BT86 120 aa12.04□□□□□ -0.48
EFEMP1-202ENST00000394555 DUX5Q96PT3 197 aa12.04□□□□□ -0.48
EFEMP1-202ENST00000394555 C10orf99Q6UWK7 81 aa12.03□□□□□ -0.48
EFEMP1-202ENST00000394555 H3BUA1 57 aa12.03□□□□□ -0.48
EFEMP1-202ENST00000394555 LST1O00453 97 aa12.03□□□□□ -0.48
EFEMP1-202ENST00000394555 TMEM61Q8N0U2 210 aa12.03□□□□□ -0.48
EFEMP1-202ENST00000394555 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
EFEMP1-202ENST00000394555 SPANXDQ9BXN6 97 aa12.03□□□□□ -0.48
EFEMP1-202ENST00000394555 SPANXCQ9NY87 97 aa12.03□□□□□ -0.48
EFEMP1-202ENST00000394555 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
EFEMP1-202ENST00000394555 IGLV1-40P01703 118 aa12.01□□□□□ -0.49
EFEMP1-202ENST00000394555 SHISA2Q6UWI4 295 aa12.01□□□□□ -0.49
EFEMP1-202ENST00000394555 PYGO1Q9Y3Y4 419 aa12.01□□□□□ -0.49
EFEMP1-202ENST00000394555 CUBNO60494 3623 aa12.01□□□□□ -0.49
EFEMP1-202ENST00000394555 K7EMT4 169 aa12□□□□□ -0.49
EFEMP1-202ENST00000394555 LINC01600Q96MT4 127 aa12□□□□□ -0.49
EFEMP1-202ENST00000394555 A6NDX4 124 aa12□□□□□ -0.49
EFEMP1-202ENST00000394555 IGHV4-61A0A0C4DH41 118 aa12□□□□□ -0.49
EFEMP1-202ENST00000394555 BRI3O95415 125 aa11.99□□□□□ -0.49
EFEMP1-202ENST00000394555 CDKN2A-AS1Q9UH64 79 aa11.99□□□□□ -0.49
EFEMP1-202ENST00000394555 SYNJ2BPP57105 145 aa11.99□□□□□ -0.49
EFEMP1-202ENST00000394555 Q6ZSN1 163 aa11.99□□□□□ -0.49
EFEMP1-202ENST00000394555 YAE1D1Q9NRH1 226 aa11.99□□□□□ -0.49
EFEMP1-202ENST00000394555 CELSR2Q9HCU4 2923 aa11.99□□□□□ -0.49
EFEMP1-202ENST00000394555 TINCRA0A1B0GVN0 87 aa11.98□□□□□ -0.49
EFEMP1-202ENST00000394555 RBMY1A1P0DJD3 496 aaKnown RBP11.98□□□□□ -0.49
EFEMP1-202ENST00000394555 RBMY1CP0DJD4 496 aa11.98□□□□□ -0.49
EFEMP1-202ENST00000394555 RBMY1FQ15415 496 aaKnown RBP11.98□□□□□ -0.49
EFEMP1-202ENST00000394555 K7EQG2 157 aa11.98□□□□□ -0.49
EFEMP1-202ENST00000394555 KLRB1Q12918 225 aa11.98□□□□□ -0.49
EFEMP1-202ENST00000394555 LINC00467Q9BRT7 94 aa11.97□□□□□ -0.49
EFEMP1-202ENST00000394555 CSMD2Q7Z408 3487 aa11.97□□□□□ -0.49
EFEMP1-202ENST00000394555 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
EFEMP1-202ENST00000394555 FAM236AA0A1B0GUQ0 79 aa11.96□□□□□ -0.49
EFEMP1-202ENST00000394555 FAM236BA0A1B0GV22 79 aa11.96□□□□□ -0.49
EFEMP1-202ENST00000394555 CITED2Q99967 270 aaPredicted RBP11.96□□□□□ -0.49
EFEMP1-202ENST00000394555 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.49
EFEMP1-202ENST00000394555 NOTCH3Q9UM47 2321 aa11.95□□□□□ -0.5
EFEMP1-202ENST00000394555 MRPL23Q16540 153 aaKnown RBP11.95□□□□□ -0.5
EFEMP1-202ENST00000394555 FAM110AQ9BQ89 295 aa11.95□□□□□ -0.5
EFEMP1-202ENST00000394555 C2CD3Q4AC94 2353 aa11.95□□□□□ -0.5
EFEMP1-202ENST00000394555 FAM240AA0A1B0GVK7 77 aa11.95□□□□□ -0.5
EFEMP1-202ENST00000394555 TMEM101Q96IK0 257 aa11.95□□□□□ -0.5
EFEMP1-202ENST00000394555 DGAT2L7PQ6IED9 249 aa11.95□□□□□ -0.5
EFEMP1-202ENST00000394555 CIRBPQ14011 172 aaKnown RBP11.94□□□□□ -0.5
EFEMP1-202ENST00000394555 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.94□□□□□ -0.5
EFEMP1-202ENST00000394555 Q9H8V8 135 aa11.94□□□□□ -0.5
EFEMP1-202ENST00000394555 NCOR2Q9Y618 2525 aa11.94□□□□□ -0.5
EFEMP1-202ENST00000394555 SPANXA1Q9NS26 97 aa11.93□□□□□ -0.5
EFEMP1-202ENST00000394555 COX6A2Q02221 97 aa11.93□□□□□ -0.5
EFEMP1-202ENST00000394555 CFHR3Q02985 330 aa11.93□□□□□ -0.5
EFEMP1-202ENST00000394555 DEFB121Q5J5C9 76 aa11.93□□□□□ -0.5
EFEMP1-202ENST00000394555 C19orf84I3L1E1 186 aa11.92□□□□□ -0.5
EFEMP1-202ENST00000394555 Q8N2B8 174 aa11.92□□□□□ -0.5
EFEMP1-202ENST00000394555 LINC00308Q8TCZ7 52 aa11.92□□□□□ -0.5
EFEMP1-202ENST00000394555 PSMB8P28062 276 aa11.92□□□□□ -0.5
EFEMP1-202ENST00000394555 TRBV7-7A0A0K0K1E9 115 aa11.92□□□□□ -0.5
EFEMP1-202ENST00000394555 DEFB131AP59861 70 aa11.91□□□□□ -0.5
EFEMP1-202ENST00000394555 SMCR5Q8TEV8 140 aa11.91□□□□□ -0.5
EFEMP1-202ENST00000394555 NDUFA1O15239 70 aa11.9□□□□□ -0.5
EFEMP1-202ENST00000394555 PIMREGQ9BSJ6 248 aa11.9□□□□□ -0.5
EFEMP1-202ENST00000394555 CHD8Q9HCK8 2581 aa11.9□□□□□ -0.5
EFEMP1-202ENST00000394555 NDUFA7O95182 113 aa11.9□□□□□ -0.5
EFEMP1-202ENST00000394555 AVPP01185 164 aa11.89□□□□□ -0.51
EFEMP1-202ENST00000394555 DAZ2Q13117 558 aaKnown RBP11.89□□□□□ -0.51
EFEMP1-202ENST00000394555 DAZ4Q86SG3 579 aaKnown RBP11.89□□□□□ -0.51
EFEMP1-202ENST00000394555 DAZ3Q9NR90 486 aaKnown RBP11.89□□□□□ -0.51
EFEMP1-202ENST00000394555 TIMM17BO60830 172 aa11.89□□□□□ -0.51
EFEMP1-202ENST00000394555 IGHV4-59P01825 116 aa11.89□□□□□ -0.51
EFEMP1-202ENST00000394555 COX7A2LO14548 114 aa11.89□□□□□ -0.51
EFEMP1-202ENST00000394555 LINC01587Q99440 93 aa11.89□□□□□ -0.51
EFEMP1-202ENST00000394555 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
EFEMP1-202ENST00000394555 SOSTDC1Q6X4U4 206 aa11.88□□□□□ -0.51
EFEMP1-202ENST00000394555 BAALC-AS2P0C853 105 aa11.87□□□□□ -0.51
EFEMP1-202ENST00000394555 HOXD3P31249 432 aaPredicted RBP11.86□□□□□ -0.51
EFEMP1-202ENST00000394555 PRIMA1Q86XR5 153 aa11.86□□□□□ -0.51
EFEMP1-202ENST00000394555 IGHV3OR16-12A0A075B7B8 117 aa11.86□□□□□ -0.51
EFEMP1-202ENST00000394555 IGHV4-30-2A0A087WSY4 118 aa11.86□□□□□ -0.51
EFEMP1-202ENST00000394555 ACYP1P07311 99 aa11.86□□□□□ -0.51
EFEMP1-202ENST00000394555 C9orf153Q5TBE3 101 aa11.86□□□□□ -0.51
EFEMP1-202ENST00000394555 LY6DQ14210 128 aa11.85□□□□□ -0.51
EFEMP1-202ENST00000394555 USP9YO00507 2555 aaPredicted RBP11.85□□□□□ -0.51
EFEMP1-202ENST00000394555 RBMY1BA6NDE4 496 aaKnown RBP11.85□□□□□ -0.51
EFEMP1-202ENST00000394555 RBMY1EA6NEQ0 496 aaKnown RBP11.85□□□□□ -0.51
EFEMP1-202ENST00000394555 RBMY1DP0C7P1 496 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms