RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 LINC00612Q8N6U2 182 aa10.65□□□□□ -0.7
CCT4-201ENST00000394440 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.7
CCT4-201ENST00000394440 F8VRH5 84 aa10.65□□□□□ -0.7
CCT4-201ENST00000394440 K7EQD1 137 aa10.65□□□□□ -0.7
CCT4-201ENST00000394440 C12orf54Q6X4T0 127 aa10.65□□□□□ -0.7
CCT4-201ENST00000394440 STPG4Q8N801 248 aa10.65□□□□□ -0.7
CCT4-201ENST00000394440 TMEM141Q96I45 108 aa10.65□□□□□ -0.7
CCT4-201ENST00000394440 OXLD1Q5BKU9 147 aa10.64□□□□□ -0.71
CCT4-201ENST00000394440 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
CCT4-201ENST00000394440 TRGV2A0A075B6R0 118 aa10.63□□□□□ -0.71
CCT4-201ENST00000394440 IGHV4-30-4P0DP06 118 aa10.63□□□□□ -0.71
CCT4-201ENST00000394440 SLC25A29Q8N8R3 303 aa10.63□□□□□ -0.71
CCT4-201ENST00000394440 EGFEM1PQ0D2K5 195 aa10.63□□□□□ -0.71
CCT4-201ENST00000394440 DEFB135Q30KP9 77 aa10.63□□□□□ -0.71
CCT4-201ENST00000394440 MRPL52Q86TS9 123 aaKnown RBP10.63□□□□□ -0.71
CCT4-201ENST00000394440 CMYA5Q8N3K9 4069 aa10.62□□□□□ -0.71
CCT4-201ENST00000394440 TRBV7-3A0A075B6L6 115 aa10.62□□□□□ -0.71
CCT4-201ENST00000394440 PRSS29PA6NIE9 313 aa10.62□□□□□ -0.71
CCT4-201ENST00000394440 COX8AP10176 69 aa10.62□□□□□ -0.71
CCT4-201ENST00000394440 PLNP26678 52 aa10.62□□□□□ -0.71
CCT4-201ENST00000394440 HNRNPA3P51991 378 aaKnown RBP10.62□□□□□ -0.71
CCT4-201ENST00000394440 CHCHD7Q9BUK0 85 aa10.62□□□□□ -0.71
CCT4-201ENST00000394440 EREGO14944 169 aa10.62□□□□□ -0.71
CCT4-201ENST00000394440 SLC25A34Q6PIV7 304 aa10.62□□□□□ -0.71
CCT4-201ENST00000394440 SNHG12Q9BXW3 62 aa10.62□□□□□ -0.71
CCT4-201ENST00000394440 FGF6P10767 208 aa10.61□□□□□ -0.71
CCT4-201ENST00000394440 KRTAP10-11P60412 298 aa10.61□□□□□ -0.71
CCT4-201ENST00000394440 ZNRF2Q8NHG8 242 aa10.61□□□□□ -0.71
CCT4-201ENST00000394440 TRBV6-4A0A1B0GX49 114 aa10.61□□□□□ -0.71
CCT4-201ENST00000394440 EMP1P54849 157 aa10.61□□□□□ -0.71
CCT4-201ENST00000394440 MRPS16Q9Y3D3 137 aaKnown RBP10.61□□□□□ -0.71
CCT4-201ENST00000394440 IGHV3-38A0A0C4DH36 116 aa10.6□□□□□ -0.71
CCT4-201ENST00000394440 RPL36AP83881 106 aaKnown RBP10.6□□□□□ -0.71
CCT4-201ENST00000394440 PMVKQ15126 192 aa10.6□□□□□ -0.71
CCT4-201ENST00000394440 ZC2HC1BQ5TFG8 222 aa10.6□□□□□ -0.71
CCT4-201ENST00000394440 PHLDA1Q8WV24 401 aaPredicted RBP10.6□□□□□ -0.71
CCT4-201ENST00000394440 RPL36ALQ969Q0 106 aaKnown RBP10.6□□□□□ -0.71
CCT4-201ENST00000394440 PYGO1Q9Y3Y4 419 aa10.6□□□□□ -0.71
CCT4-201ENST00000394440 UBE2D3P61077 147 aa10.6□□□□□ -0.71
CCT4-201ENST00000394440 UBE2D2P62837 147 aa10.6□□□□□ -0.71
CCT4-201ENST00000394440 FHL2Q14192 279 aa10.6□□□□□ -0.71
CCT4-201ENST00000394440 FAM104AQ969W3 186 aa10.6□□□□□ -0.71
CCT4-201ENST00000394440 CST9LQ9H4G1 147 aa10.59□□□□□ -0.71
CCT4-201ENST00000394440 IGLV4-69A0A075B6H9 119 aa10.59□□□□□ -0.71
CCT4-201ENST00000394440 M0R143 59 aa10.59□□□□□ -0.71
CCT4-201ENST00000394440 IGLV4-3A0A075B6K6 122 aa10.58□□□□□ -0.72
CCT4-201ENST00000394440 IGKV2D-26A0A0A0MRZ7 120 aa10.58□□□□□ -0.72
CCT4-201ENST00000394440 BOD1L2Q8IYS8 172 aa10.58□□□□□ -0.72
CCT4-201ENST00000394440 OR11H2Q8NH07 326 aa10.58□□□□□ -0.72
CCT4-201ENST00000394440 OPRPNQ99935 248 aaPredicted RBP10.58□□□□□ -0.72
CCT4-201ENST00000394440 NBEAL2Q6ZNJ1 2754 aa10.58□□□□□ -0.72
CCT4-201ENST00000394440 DAZ4Q86SG3 579 aaKnown RBP10.58□□□□□ -0.72
CCT4-201ENST00000394440 DAZ3Q9NR90 486 aaKnown RBP10.58□□□□□ -0.72
CCT4-201ENST00000394440 LYRM9A8MSI8 78 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 A8MZ25 164 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 NPSP0C0P6 89 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 TCTAP57738 103 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 LBHQ53QV2 105 aaPredicted RBP10.57□□□□□ -0.72
CCT4-201ENST00000394440 Q8NAQ8 132 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 RNF183Q96D59 192 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 TRGV4A0A0C4DH28 118 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 DLEU1O43261 78 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 PKD1L1Q8TDX9 2849 aa10.57□□□□□ -0.72
CCT4-201ENST00000394440 IGHV4-28A0A0C4DH34 117 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 GAGE12JA6NER3 117 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 DEFB130BP0DP73 79 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 DEFB130AP0DP74 79 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 GAGE1Q13065 139 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 GAGE4Q13068 117 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 GAGE5Q13069 117 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 GAGE13Q4V321 117 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 C2orf91Q6ZV80 131 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 MIFP14174 115 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 NMUP48645 174 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 CRYBA4P53673 196 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 FAM222AQ5U5X8 452 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 NTM-AS1Q6ZSK4 140 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 C2orf88Q9BSF0 95 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 SPANXA1Q9NS26 97 aa10.56□□□□□ -0.72
CCT4-201ENST00000394440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.55□□□□□ -0.72
CCT4-201ENST00000394440 LOC100131303A0A0U1RQF7 123 aa10.55□□□□□ -0.72
CCT4-201ENST00000394440 IGKV2-29A2NJV5 120 aaPredicted RBP10.55□□□□□ -0.72
CCT4-201ENST00000394440 C11orf86A6NJI1 115 aa10.55□□□□□ -0.72
CCT4-201ENST00000394440 AMELXQ99217 191 aa10.55□□□□□ -0.72
CCT4-201ENST00000394440 PAPPA-AS1Q5QFB9 102 aa10.55□□□□□ -0.72
CCT4-201ENST00000394440 CEMP1Q6PRD7 247 aaPredicted RBP10.54□□□□□ -0.72
CCT4-201ENST00000394440 NFE4Q86UQ8 179 aa10.54□□□□□ -0.72
CCT4-201ENST00000394440 DNAH3Q8TD57 4116 aa10.54□□□□□ -0.72
CCT4-201ENST00000394440 SBSPONQ8IVN8 264 aa10.53□□□□□ -0.72
CCT4-201ENST00000394440 PRADC1Q9BSG0 188 aa10.53□□□□□ -0.72
CCT4-201ENST00000394440 TIMM21Q9BVV7 248 aa10.53□□□□□ -0.72
CCT4-201ENST00000394440 GTSF1LQ9H1H1 148 aa10.53□□□□□ -0.72
CCT4-201ENST00000394440 VCX2Q9H322 139 aa10.53□□□□□ -0.72
CCT4-201ENST00000394440 G3V4G9 280 aa10.52□□□□□ -0.72
CCT4-201ENST00000394440 DEFB4AO15263 64 aa10.52□□□□□ -0.72
CCT4-201ENST00000394440 TTTY13Q9BZ97 58 aa10.52□□□□□ -0.72
CCT4-201ENST00000394440 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms