RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 DEFB135Q30KP9 77 aa12.77□□□□□ -0.37
CLDND1-204ENST00000394185 PCP2Q8IVA1 136 aa12.77□□□□□ -0.37
CLDND1-204ENST00000394185 SLC25A29Q8N8R3 303 aa12.77□□□□□ -0.37
CLDND1-204ENST00000394185 ZNRF2Q8NHG8 242 aa12.76□□□□□ -0.37
CLDND1-204ENST00000394185 TTTY13Q9BZ97 58 aa12.76□□□□□ -0.37
CLDND1-204ENST00000394185 ZMAT5Q9UDW3 170 aaKnown RBP12.76□□□□□ -0.37
CLDND1-204ENST00000394185 G0S2P27469 103 aa12.75□□□□□ -0.37
CLDND1-204ENST00000394185 CEMP1Q6PRD7 247 aaPredicted RBP12.75□□□□□ -0.37
CLDND1-204ENST00000394185 TIMM17AQ99595 171 aa12.75□□□□□ -0.37
CLDND1-204ENST00000394185 K7EQD1 137 aa12.74□□□□□ -0.37
CLDND1-204ENST00000394185 CHCHD7Q9BUK0 85 aa12.74□□□□□ -0.37
CLDND1-204ENST00000394185 MRPS16Q9Y3D3 137 aaKnown RBP12.74□□□□□ -0.37
CLDND1-204ENST00000394185 DNAH3Q8TD57 4116 aa12.74□□□□□ -0.37
CLDND1-204ENST00000394185 LOC100131303A0A0U1RQF7 123 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 DEFB4AO15263 64 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 DEFB130BP0DP73 79 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 DEFB130AP0DP74 79 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 PLNP26678 52 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 KRTAP10-11P60412 298 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 FAM104AQ969W3 186 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 TMEM141Q96I45 108 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 DNAJC30Q96LL9 226 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 CST9LQ9H4G1 147 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 IGLV4-69A0A075B6H9 119 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.73□□□□□ -0.37
CLDND1-204ENST00000394185 IGKV2-29A2NJV5 120 aaPredicted RBP12.73□□□□□ -0.37
CLDND1-204ENST00000394185 IGHV4-30-4P0DP06 118 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 C2orf91Q6ZV80 131 aa12.73□□□□□ -0.37
CLDND1-204ENST00000394185 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
CLDND1-204ENST00000394185 HINT1P49773 126 aaPredicted RBP12.72□□□□□ -0.37
CLDND1-204ENST00000394185 PMVKQ15126 192 aa12.72□□□□□ -0.37
CLDND1-204ENST00000394185 GAGE12JA6NER3 117 aa12.71□□□□□ -0.37
CLDND1-204ENST00000394185 GAGE1Q13065 139 aa12.71□□□□□ -0.37
CLDND1-204ENST00000394185 GAGE4Q13068 117 aa12.71□□□□□ -0.37
CLDND1-204ENST00000394185 GAGE5Q13069 117 aa12.71□□□□□ -0.37
CLDND1-204ENST00000394185 GAGE13Q4V321 117 aa12.71□□□□□ -0.37
CLDND1-204ENST00000394185 C2orf88Q9BSF0 95 aa12.71□□□□□ -0.37
CLDND1-204ENST00000394185 BOD1L2Q8IYS8 172 aa12.71□□□□□ -0.37
CLDND1-204ENST00000394185 IGLV4-3A0A075B6K6 122 aa12.7□□□□□ -0.38
CLDND1-204ENST00000394185 LINC01549A6NIU2 74 aa12.7□□□□□ -0.38
CLDND1-204ENST00000394185 RNASE13Q5GAN3 156 aaKnown RBP12.7□□□□□ -0.38
CLDND1-204ENST00000394185 KIR2DL5BQ8NHK3 375 aa12.7□□□□□ -0.38
CLDND1-204ENST00000394185 A0A1B0GV90 55 aa12.7□□□□□ -0.38
CLDND1-204ENST00000394185 C11orf86A6NJI1 115 aa12.7□□□□□ -0.38
CLDND1-204ENST00000394185 APOC4P55056 127 aa12.7□□□□□ -0.38
CLDND1-204ENST00000394185 COTL1Q14019 142 aa12.7□□□□□ -0.38
CLDND1-204ENST00000394185 C12orf54Q6X4T0 127 aa12.7□□□□□ -0.38
CLDND1-204ENST00000394185 NOTCH1P46531 2555 aa12.69□□□□□ -0.38
CLDND1-204ENST00000394185 FHL2Q14192 279 aa12.69□□□□□ -0.38
CLDND1-204ENST00000394185 SHISA2Q6UWI4 295 aa12.69□□□□□ -0.38
CLDND1-204ENST00000394185 TRGV4A0A0C4DH28 118 aa12.69□□□□□ -0.38
CLDND1-204ENST00000394185 TRBV10-1A0A0K0K1A3 114 aa12.69□□□□□ -0.38
CLDND1-204ENST00000394185 RPL36AP83881 106 aaKnown RBP12.69□□□□□ -0.38
CLDND1-204ENST00000394185 MPV17L2Q567V2 206 aa12.69□□□□□ -0.38
CLDND1-204ENST00000394185 OR11H2Q8NH07 326 aa12.69□□□□□ -0.38
CLDND1-204ENST00000394185 RPL36ALQ969Q0 106 aaKnown RBP12.69□□□□□ -0.38
CLDND1-204ENST00000394185 UBE2D3P61077 147 aa12.68□□□□□ -0.38
CLDND1-204ENST00000394185 UBE2D2P62837 147 aa12.68□□□□□ -0.38
CLDND1-204ENST00000394185 NTM-AS1Q6ZSK4 140 aa12.68□□□□□ -0.38
CLDND1-204ENST00000394185 MRPL52Q86TS9 123 aaKnown RBP12.68□□□□□ -0.38
CLDND1-204ENST00000394185 UBE2D4Q9Y2X8 147 aa12.67□□□□□ -0.38
CLDND1-204ENST00000394185 LBHQ53QV2 105 aaPredicted RBP12.67□□□□□ -0.38
CLDND1-204ENST00000394185 FAM222AQ5U5X8 452 aa12.67□□□□□ -0.38
CLDND1-204ENST00000394185 LINC00612Q8N6U2 182 aa12.67□□□□□ -0.38
CLDND1-204ENST00000394185 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
CLDND1-204ENST00000394185 SMIM9A6NGZ8 99 aa12.66□□□□□ -0.38
CLDND1-204ENST00000394185 MAPKAPK5-AS1Q8N8E1 139 aa12.66□□□□□ -0.38
CLDND1-204ENST00000394185 IGHV4-28A0A0C4DH34 117 aa12.66□□□□□ -0.38
CLDND1-204ENST00000394185 TRBV6-4A0A1B0GX49 114 aa12.66□□□□□ -0.38
CLDND1-204ENST00000394185 NBEAL1Q6ZS30 2694 aa12.65□□□□□ -0.38
CLDND1-204ENST00000394185 LINC00694P0DN24 101 aa12.65□□□□□ -0.38
CLDND1-204ENST00000394185 PYGO1Q9Y3Y4 419 aa12.65□□□□□ -0.38
CLDND1-204ENST00000394185 VCX2Q9H322 139 aa12.64□□□□□ -0.39
CLDND1-204ENST00000394185 Q6ZUT4 128 aa12.64□□□□□ -0.39
CLDND1-204ENST00000394185 G3V4G9 280 aa12.63□□□□□ -0.39
CLDND1-204ENST00000394185 DLEU1O43261 78 aa12.63□□□□□ -0.39
CLDND1-204ENST00000394185 DAZ4Q86SG3 579 aaKnown RBP12.63□□□□□ -0.39
CLDND1-204ENST00000394185 Q8NAQ8 132 aa12.63□□□□□ -0.39
CLDND1-204ENST00000394185 DAZ3Q9NR90 486 aaKnown RBP12.63□□□□□ -0.39
CLDND1-204ENST00000394185 A0A0J9YXV3 536 aa12.63□□□□□ -0.39
CLDND1-204ENST00000394185 AMELXQ99217 191 aa12.63□□□□□ -0.39
CLDND1-204ENST00000394185 CELA1Q9UNI1 258 aa12.63□□□□□ -0.39
CLDND1-204ENST00000394185 EGFEM1PQ0D2K5 195 aa12.62□□□□□ -0.39
CLDND1-204ENST00000394185 CHAC1Q9BUX1 264 aa12.62□□□□□ -0.39
CLDND1-204ENST00000394185 BVES-AS1Q5T3Y7 98 aa12.62□□□□□ -0.39
CLDND1-204ENST00000394185 TMEM170BQ5T4T1 132 aa12.62□□□□□ -0.39
CLDND1-204ENST00000394185 PRADC1Q9BSG0 188 aa12.62□□□□□ -0.39
CLDND1-204ENST00000394185 RNF183Q96D59 192 aa12.61□□□□□ -0.39
CLDND1-204ENST00000394185 SPANXA1Q9NS26 97 aa12.61□□□□□ -0.39
CLDND1-204ENST00000394185 CIDEAO60543 219 aa12.6□□□□□ -0.39
CLDND1-204ENST00000394185 TRBV25-1A0A075B6N4 114 aa12.6□□□□□ -0.39
CLDND1-204ENST00000394185 E9PLD3 99 aa12.6□□□□□ -0.39
CLDND1-204ENST00000394185 NFE4Q86UQ8 179 aa12.6□□□□□ -0.39
CLDND1-204ENST00000394185 TENM3Q9P273 2699 aa12.6□□□□□ -0.39
CLDND1-204ENST00000394185 COL5A1-AS1Q5SY13 56 aa12.59□□□□□ -0.39
CLDND1-204ENST00000394185 Q6ZVH6 145 aa12.59□□□□□ -0.39
CLDND1-204ENST00000394185 RETNQ9HD89 108 aa12.59□□□□□ -0.39
CLDND1-204ENST00000394185 LYRM9A8MSI8 78 aa12.59□□□□□ -0.39
CLDND1-204ENST00000394185 TMEM97Q5BJF2 176 aa12.59□□□□□ -0.39
CLDND1-204ENST00000394185 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms