RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 Q9UF83 564 aa12.09□□□□□ -0.47
CNP-201ENST00000393888 NDUFA12Q9UI09 145 aa12.09□□□□□ -0.47
CNP-201ENST00000393888 A0A0J9YX75 114 aa12.09□□□□□ -0.47
CNP-201ENST00000393888 ID1P41134 155 aa12.09□□□□□ -0.47
CNP-201ENST00000393888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.09□□□□□ -0.475e-8■□□□□ 10.2
CNP-201ENST00000393888 HERV-K104P63124 156 aa12.08□□□□□ -0.48
CNP-201ENST00000393888 PRM2P04554 102 aa12.08□□□□□ -0.48
CNP-201ENST00000393888 Q6Q795 121 aa12.08□□□□□ -0.48
CNP-201ENST00000393888 SHISA2Q6UWI4 295 aa12.07□□□□□ -0.48
CNP-201ENST00000393888 USMG5Q96IX5 58 aa12.07□□□□□ -0.48
CNP-201ENST00000393888 DOPEY2Q9Y3R5 2298 aa12.07□□□□□ -0.48
CNP-201ENST00000393888 H3BUX3 64 aa12.07□□□□□ -0.48
CNP-201ENST00000393888 PRB1P04280 392 aa12.07□□□□□ -0.48
CNP-201ENST00000393888 TMEM95Q3KNT9 176 aa12.07□□□□□ -0.48
CNP-201ENST00000393888 MEIG1Q5JSS6 88 aa12.07□□□□□ -0.48
CNP-201ENST00000393888 IGHV1OR15-1A0A075B7D0 117 aa12.06□□□□□ -0.48
CNP-201ENST00000393888 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
CNP-201ENST00000393888 IGHV4-38-2P0DP08 117 aa12.06□□□□□ -0.48
CNP-201ENST00000393888 COX6CP09669 75 aa12.06□□□□□ -0.48
CNP-201ENST00000393888 IGHV1-58A0A0C4DH39 117 aa12.05□□□□□ -0.48
CNP-201ENST00000393888 BBC3Q96PG8 261 aaPredicted RBP12.05□□□□□ -0.48
CNP-201ENST00000393888 MIAQ16674 131 aa12.05□□□□□ -0.48
CNP-201ENST00000393888 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
CNP-201ENST00000393888 IGHG2P01859 326 aa12.04□□□□□ -0.48
CNP-201ENST00000393888 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
CNP-201ENST00000393888 CSMD2Q7Z408 3487 aa12.04□□□□□ -0.48
CNP-201ENST00000393888 LINC01600Q96MT4 127 aa12.04□□□□□ -0.48
CNP-201ENST00000393888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.03□□□□□ -0.48
CNP-201ENST00000393888 IGKV2-29A2NJV5 120 aaPredicted RBP12.03□□□□□ -0.48
CNP-201ENST00000393888 C10orf99Q6UWK7 81 aa12.03□□□□□ -0.48
CNP-201ENST00000393888 TRGV11A0A075B6L2 103 aa12.03□□□□□ -0.48
CNP-201ENST00000393888 LST1O00453 97 aa12.03□□□□□ -0.48
CNP-201ENST00000393888 VSIG2Q96IQ7 327 aa12.03□□□□□ -0.48
CNP-201ENST00000393888 SPANXDQ9BXN6 97 aa12.03□□□□□ -0.48
CNP-201ENST00000393888 SPANXCQ9NY87 97 aa12.03□□□□□ -0.48
CNP-201ENST00000393888 H3BT86 120 aa12.02□□□□□ -0.48
CNP-201ENST00000393888 TMEM61Q8N0U2 210 aa12.02□□□□□ -0.48
CNP-201ENST00000393888 DUX5Q96PT3 197 aa12.02□□□□□ -0.48
CNP-201ENST00000393888 NACAE9PAV3 2078 aa12.02□□□□□ -0.49
CNP-201ENST00000393888 HIVEP3Q5T1R4 2406 aa12.02□□□□□ -0.49
CNP-201ENST00000393888 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
CNP-201ENST00000393888 ZNF625Q96I27 306 aaPredicted RBP12.01□□□□□ -0.49
CNP-201ENST00000393888 RBMY1A1P0DJD3 496 aaKnown RBP12□□□□□ -0.49
CNP-201ENST00000393888 RBMY1CP0DJD4 496 aa12□□□□□ -0.49
CNP-201ENST00000393888 RBMY1FQ15415 496 aaKnown RBP12□□□□□ -0.49
CNP-201ENST00000393888 CUBNO60494 3623 aa12□□□□□ -0.49
CNP-201ENST00000393888 Q6ZSN1 163 aa12□□□□□ -0.49
CNP-201ENST00000393888 IGLV1-40P01703 118 aa11.99□□□□□ -0.49
CNP-201ENST00000393888 FAM110AQ9BQ89 295 aa11.99□□□□□ -0.49
CNP-201ENST00000393888 PYGO1Q9Y3Y4 419 aa11.99□□□□□ -0.49
CNP-201ENST00000393888 TNFRSF18Q9Y5U5 241 aa11.99□□□□□ -0.49
CNP-201ENST00000393888 SNRPD3P62318 126 aaKnown RBP11.99□□□□□ -0.49
CNP-201ENST00000393888 H3BUA1 57 aa11.98□□□□□ -0.49
CNP-201ENST00000393888 CITED2Q99967 270 aaPredicted RBP11.98□□□□□ -0.49
CNP-201ENST00000393888 CSPG4Q6UVK1 2322 aa11.98□□□□□ -0.49
CNP-201ENST00000393888 CDKN2A-AS1Q9UH64 79 aa11.98□□□□□ -0.49
CNP-201ENST00000393888 CREBBPQ92793 2442 aa11.98□□□□□ -0.49
CNP-201ENST00000393888 KMT2BQ9UMN6 2715 aaPredicted RBP11.97□□□□□ -0.49
CNP-201ENST00000393888 A6NDX4 124 aa11.97□□□□□ -0.49
CNP-201ENST00000393888 CELSR2Q9HCU4 2923 aa11.97□□□□□ -0.49
CNP-201ENST00000393888 TINCRA0A1B0GVN0 87 aa11.97□□□□□ -0.49
CNP-201ENST00000393888 K7EMT4 169 aa11.97□□□□□ -0.49
CNP-201ENST00000393888 BRI3O95415 125 aa11.97□□□□□ -0.49
CNP-201ENST00000393888 GNLYP22749 145 aa11.97□□□□□ -0.49
CNP-201ENST00000393888 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
CNP-201ENST00000393888 ZNF462Q96JM2 2506 aa11.96□□□□□ -0.49
CNP-201ENST00000393888 FAM236AA0A1B0GUQ0 79 aa11.96□□□□□ -0.49
CNP-201ENST00000393888 FAM236BA0A1B0GV22 79 aa11.96□□□□□ -0.49
CNP-201ENST00000393888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.96□□□□□ -0.49
CNP-201ENST00000393888 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.49
CNP-201ENST00000393888 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.49
CNP-201ENST00000393888 IGHV4-61A0A0C4DH41 118 aa11.96□□□□□ -0.5
CNP-201ENST00000393888 DEFB121Q5J5C9 76 aa11.96□□□□□ -0.5
CNP-201ENST00000393888 CHD6Q8TD26 2715 aa11.95□□□□□ -0.5
CNP-201ENST00000393888 K7EQG2 157 aa11.95□□□□□ -0.5
CNP-201ENST00000393888 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
CNP-201ENST00000393888 MRPL23Q16540 153 aaKnown RBP11.95□□□□□ -0.5
CNP-201ENST00000393888 SMCR5Q8TEV8 140 aa11.95□□□□□ -0.5
CNP-201ENST00000393888 YAE1D1Q9NRH1 226 aa11.95□□□□□ -0.5
CNP-201ENST00000393888 COX6A2Q02221 97 aa11.94□□□□□ -0.5
CNP-201ENST00000393888 SPG11Q96JI7 2443 aa11.94□□□□□ -0.5
CNP-201ENST00000393888 FAM240AA0A1B0GVK7 77 aa11.94□□□□□ -0.5
CNP-201ENST00000393888 Q8N2B8 174 aa11.94□□□□□ -0.5
CNP-201ENST00000393888 TMEM101Q96IK0 257 aa11.94□□□□□ -0.5
CNP-201ENST00000393888 TRBV7-7A0A0K0K1E9 115 aa11.93□□□□□ -0.5
CNP-201ENST00000393888 LINC01587Q99440 93 aa11.93□□□□□ -0.5
CNP-201ENST00000393888 CFHR3Q02985 330 aa11.92□□□□□ -0.5
CNP-201ENST00000393888 LINC00308Q8TCZ7 52 aa11.92□□□□□ -0.5
CNP-201ENST00000393888 Q9H8V8 135 aa11.92□□□□□ -0.5
CNP-201ENST00000393888 FLNCQ14315 2725 aa11.91□□□□□ -0.5
CNP-201ENST00000393888 C19orf84I3L1E1 186 aa11.91□□□□□ -0.5
CNP-201ENST00000393888 NDUFA7O95182 113 aa11.91□□□□□ -0.5
CNP-201ENST00000393888 ZNF843Q8N446 348 aa11.91□□□□□ -0.5
CNP-201ENST00000393888 SOSTDC1Q6X4U4 206 aa11.9□□□□□ -0.5
CNP-201ENST00000393888 SPANXA1Q9NS26 97 aa11.9□□□□□ -0.5
CNP-201ENST00000393888 PSMB8P28062 276 aa11.89□□□□□ -0.51
CNP-201ENST00000393888 NDUFA1O15239 70 aa11.89□□□□□ -0.51
CNP-201ENST00000393888 DAZ2Q13117 558 aaKnown RBP11.89□□□□□ -0.51
CNP-201ENST00000393888 DAZ4Q86SG3 579 aaKnown RBP11.89□□□□□ -0.51
CNP-201ENST00000393888 DAZ3Q9NR90 486 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms