RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
SCN3B-202ENST00000392770 NFE4Q86UQ8 179 aa12.3□□□□□ -0.44
SCN3B-202ENST00000392770 RPL32P62910 135 aaKnown RBP12.3□□□□□ -0.44
SCN3B-202ENST00000392770 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
SCN3B-202ENST00000392770 RS1O15537 224 aa12.3□□□□□ -0.44
SCN3B-202ENST00000392770 C11orf45Q8TAV5 145 aa12.3□□□□□ -0.44
SCN3B-202ENST00000392770 KLLNB2CW77 178 aa12.29□□□□□ -0.44
SCN3B-202ENST00000392770 CRIP2P52943 208 aaPredicted RBP12.29□□□□□ -0.44
SCN3B-202ENST00000392770 NCR3O14931 201 aa12.29□□□□□ -0.44
SCN3B-202ENST00000392770 WFDC10AQ9H1F0 79 aa12.29□□□□□ -0.44
SCN3B-202ENST00000392770 DSCR8Q96T75 97 aa12.28□□□□□ -0.44
SCN3B-202ENST00000392770 NDUFA1O15239 70 aa12.28□□□□□ -0.44
SCN3B-202ENST00000392770 DOPEY2Q9Y3R5 2298 aa12.28□□□□□ -0.44
SCN3B-202ENST00000392770 NTN5Q8WTR8 489 aaPredicted RBP12.28□□□□□ -0.44
SCN3B-202ENST00000392770 BAALC-AS2P0C853 105 aa12.28□□□□□ -0.44
SCN3B-202ENST00000392770 UBE2BP63146 152 aa12.28□□□□□ -0.44
SCN3B-202ENST00000392770 ORMDL1Q9P0S3 153 aa12.27□□□□□ -0.44
SCN3B-202ENST00000392770 SHISA2Q6UWI4 295 aa12.27□□□□□ -0.45
SCN3B-202ENST00000392770 DNAH12Q6ZR08 3092 aa12.27□□□□□ -0.45
SCN3B-202ENST00000392770 IGHV4-4A0A075B6R2 117 aa12.27□□□□□ -0.45
SCN3B-202ENST00000392770 SPAG11BQ08648 103 aa12.27□□□□□ -0.45
SCN3B-202ENST00000392770 C9orf153Q5TBE3 101 aa12.27□□□□□ -0.45
SCN3B-202ENST00000392770 TAX1BP3O14907 124 aa12.26□□□□□ -0.45
SCN3B-202ENST00000392770 CXCL5P42830 114 aa12.26□□□□□ -0.45
SCN3B-202ENST00000392770 FAM110AQ9BQ89 295 aa12.26□□□□□ -0.45
SCN3B-202ENST00000392770 GAGE12HA6NDE8 117 aa12.26□□□□□ -0.45
SCN3B-202ENST00000392770 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
SCN3B-202ENST00000392770 LINC00269Q8N2A0 174 aa12.25□□□□□ -0.45
SCN3B-202ENST00000392770 DEFB105AQ8NG35 78 aa12.25□□□□□ -0.45
SCN3B-202ENST00000392770 NRACQ8N912 160 aa12.25□□□□□ -0.45
SCN3B-202ENST00000392770 PCSK5Q92824 1860 aa12.25□□□□□ -0.45
SCN3B-202ENST00000392770 TNCP24821 2201 aa12.24□□□□□ -0.45
SCN3B-202ENST00000392770 IGLV4-3A0A075B6K6 122 aa12.24□□□□□ -0.45
SCN3B-202ENST00000392770 ARHGAP32A7KAX9 2087 aa12.24□□□□□ -0.45
SCN3B-202ENST00000392770 PRM2P04554 102 aa12.24□□□□□ -0.45
SCN3B-202ENST00000392770 MIR7-3HGQ8N6C7 128 aa12.24□□□□□ -0.45
SCN3B-202ENST00000392770 MRGPRG-AS1Q2M3A8 158 aa12.24□□□□□ -0.45
SCN3B-202ENST00000392770 H7C423 109 aa12.24□□□□□ -0.45
SCN3B-202ENST00000392770 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.24□□□□□ -0.45
SCN3B-202ENST00000392770 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
SCN3B-202ENST00000392770 UBL5Q9BZL1 73 aa12.23□□□□□ -0.45
SCN3B-202ENST00000392770 TIRAPP58753 221 aa12.23□□□□□ -0.45
SCN3B-202ENST00000392770 REG3AQ06141 175 aa12.23□□□□□ -0.45
SCN3B-202ENST00000392770 NDUFA7O95182 113 aa12.22□□□□□ -0.45
SCN3B-202ENST00000392770 MIFP14174 115 aa12.22□□□□□ -0.45
SCN3B-202ENST00000392770 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
SCN3B-202ENST00000392770 TRBV6-4A0A1B0GX49 114 aa12.22□□□□□ -0.45
SCN3B-202ENST00000392770 TMEM223A0PJW6 202 aa12.21□□□□□ -0.45
SCN3B-202ENST00000392770 BBC3Q96PG8 261 aaPredicted RBP12.21□□□□□ -0.45
SCN3B-202ENST00000392770 TP73-AS1Q9UF72 201 aa12.21□□□□□ -0.45
SCN3B-202ENST00000392770 A0A0J9YXY3 114 aa12.21□□□□□ -0.45
SCN3B-202ENST00000392770 PKIGQ9Y2B9 76 aa12.21□□□□□ -0.45
SCN3B-202ENST00000392770 GAS8-AS1O95177 125 aa12.21□□□□□ -0.46
SCN3B-202ENST00000392770 ANKRD29Q8N6D5 301 aa12.21□□□□□ -0.46
SCN3B-202ENST00000392770 IGHV4-28A0A0C4DH34 117 aa12.2□□□□□ -0.46
SCN3B-202ENST00000392770 H0YGX0 51 aa12.2□□□□□ -0.46
SCN3B-202ENST00000392770 MIAQ16674 131 aa12.2□□□□□ -0.46
SCN3B-202ENST00000392770 ETDCA0A1B0GVM5 59 aa12.2□□□□□ -0.46
SCN3B-202ENST00000392770 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
SCN3B-202ENST00000392770 TRBV27A0A0K0K1C4 114 aa12.2□□□□□ -0.46
SCN3B-202ENST00000392770 TSHBP01222 138 aa12.2□□□□□ -0.46
SCN3B-202ENST00000392770 ZNF22P17026 224 aaPredicted RBP12.2□□□□□ -0.46
SCN3B-202ENST00000392770 HAMPP81172 84 aa12.2□□□□□ -0.46
SCN3B-202ENST00000392770 PLXNB1O43157 2135 aa12.19□□□□□ -0.46
SCN3B-202ENST00000392770 TRBV6-8A0A0A6YYG3 113 aa12.19□□□□□ -0.46
SCN3B-202ENST00000392770 TM2D2Q9BX73 214 aa12.19□□□□□ -0.46
SCN3B-202ENST00000392770 IGF2RP11717 2491 aa12.19□□□□□ -0.46
SCN3B-202ENST00000392770 HIVEP2P31629 2446 aa12.18□□□□□ -0.46
SCN3B-202ENST00000392770 DEFB131BA0A096LNP1 70 aa12.18□□□□□ -0.46
SCN3B-202ENST00000392770 CLEC2BQ92478 149 aa12.18□□□□□ -0.46
SCN3B-202ENST00000392770 CDKN2A-AS1Q9UH64 79 aa12.18□□□□□ -0.46
SCN3B-202ENST00000392770 HIGD2BQ4VC39 106 aa12.18□□□□□ -0.46
SCN3B-202ENST00000392770 CHCHD10Q8WYQ3 142 aaPredicted RBP12.18□□□□□ -0.46
SCN3B-202ENST00000392770 SPATA25Q9BR10 227 aa12.18□□□□□ -0.46
SCN3B-202ENST00000392770 BRI3O95415 125 aa12.18□□□□□ -0.46
SCN3B-202ENST00000392770 RBMY1FQ15415 496 aaKnown RBP12.17□□□□□ -0.46
SCN3B-202ENST00000392770 CRYGDP07320 174 aa12.17□□□□□ -0.46
SCN3B-202ENST00000392770 LINC01620Q4KN68 170 aa12.17□□□□□ -0.46
SCN3B-202ENST00000392770 PIEZO2Q9H5I5 2752 aa12.17□□□□□ -0.46
SCN3B-202ENST00000392770 CENPFP49454 3210 aa12.17□□□□□ -0.46
SCN3B-202ENST00000392770 CRYBA4P53673 196 aa12.16□□□□□ -0.46
SCN3B-202ENST00000392770 CNFNQ9BYD5 112 aa12.16□□□□□ -0.46
SCN3B-202ENST00000392770 LOC100131303A0A0U1RQF7 123 aa12.16□□□□□ -0.46
SCN3B-202ENST00000392770 SPG11Q96JI7 2443 aa12.16□□□□□ -0.46
SCN3B-202ENST00000392770 IGKV2D-26A0A0A0MRZ7 120 aa12.15□□□□□ -0.46
SCN3B-202ENST00000392770 ZNF580Q9UK33 172 aa12.15□□□□□ -0.46
SCN3B-202ENST00000392770 ACACBO00763 2458 aa12.15□□□□□ -0.46
SCN3B-202ENST00000392770 PTPRBP23467 1997 aa12.15□□□□□ -0.46
SCN3B-202ENST00000392770 MAPKAPK5-AS1Q8N8E1 139 aa12.15□□□□□ -0.46
SCN3B-202ENST00000392770 WDR87Q6ZQQ6 2873 aa12.15□□□□□ -0.47
SCN3B-202ENST00000392770 CREBBPQ92793 2442 aa12.14□□□□□ -0.47
SCN3B-202ENST00000392770 C16orf95Q9H693 158 aa12.14□□□□□ -0.47
SCN3B-202ENST00000392770 ODF3L2Q3SX64 289 aa12.14□□□□□ -0.47
SCN3B-202ENST00000392770 NOTCH3Q9UM47 2321 aa12.14□□□□□ -0.47
SCN3B-202ENST00000392770 NACAE9PAV3 2078 aa12.14□□□□□ -0.47
SCN3B-202ENST00000392770 PYGO1Q9Y3Y4 419 aa12.14□□□□□ -0.47
SCN3B-202ENST00000392770 SS18L2Q9UHA2 77 aa12.13□□□□□ -0.47
SCN3B-202ENST00000392770 WFDC2Q14508 124 aa12.13□□□□□ -0.47
SCN3B-202ENST00000392770 NCOR2Q9Y618 2525 aa12.13□□□□□ -0.47
SCN3B-202ENST00000392770 POLR2KP53803 58 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms