RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 PI4KAP42356 2102 aa0.88□□□□□ -2.27
SNORA40.19-201ENST00000390846 MRC1P22897 1456 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 TMEM131LA2VDJ0 1609 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 MYO3AQ8NEV4 1616 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 H3BQF6 201 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 CCL3L1P16619 93 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 RPL7L1Q6DKI1 246 aaKnown RBP0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 SFTA2Q6UW10 78 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 LINC00322Q6ZN03 302 aaPredicted RBP0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 LINC00299Q6ZSB3 139 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 ABCC3O15438 1527 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 KDM5DQ9BY66 1539 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 BLMP54132 1417 aaPredicted RBP0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 CLTCQ00610 1675 aaKnown RBP0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 F5P12259 2224 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 SPAG17Q6Q759 2223 aa0.87□□□□□ -2.27
SNORA40.19-201ENST00000390846 POLA1P09884 1462 aaPredicted RBP0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 CCDC18Q5T9S5 1454 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 HMGXB3Q12766 1538 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 MAP3K1Q13233 1512 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 ARHGEF12Q9NZN5 1544 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 PPRC1Q5VV67 1664 aaKnown RBP0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 TRGV2A0A075B6R0 118 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 TRBV7-1A0A0A6YYK4 115 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 TRAV22A0A0B4J277 110 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 H3BQ15 152 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 J3QRE1 110 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 SSSCA1O60232 199 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 ATP5EP56381 51 aaPredicted RBP0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 ELOF1P60002 83 aaKnown RBP0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 GNG11P61952 73 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 SEC11AP67812 179 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 KRTAP13-1Q8IUC0 172 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 NDUFA4L2Q9NRX3 87 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 SCP2D1Q9UJQ7 156 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 MYO7AQ13402 2215 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 LRRC37A3O60309 1634 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 NHSL1Q5SYE7 1610 aa0.86□□□□□ -2.27
SNORA40.19-201ENST00000390846 SORL1Q92673 2214 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 KIF21AQ7Z4S6 1674 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 TRBV7-3A0A075B6L6 115 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 TRBV6-7A0A0A0MS04 114 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 TRBV7-7A0A0K0K1E9 115 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 K7EP34 96 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 TRAPPC2P0DI81 140 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 TRAPPC2BP0DI82 140 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 ASIPP42127 132 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 UBE2D3P61077 147 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 UBE2D2P62837 147 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 ZNF56Q15929 161 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 C10orf128Q5T292 105 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 CEP162Q5TB80 1403 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 ZNF818PQ6ZRF7 136 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 CYP2G1PQ6ZSU1 146 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 ZNF563Q8TA94 476 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 C4orf3Q8WVX3 66 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 Q96NJ1 140 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 Q9H521 79 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 TMEM14CQ9P0S9 112 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 FLG2Q5D862 2391 aaPredicted RBP0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 KDM6BO15054 1643 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 KIF14Q15058 1648 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 MAGI2Q86UL8 1455 aa0.85□□□□□ -2.27
SNORA40.19-201ENST00000390846 ZDBF2Q9HCK1 2354 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 NUP188Q5SRE5 1749 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 SSC5DA1L4H1 1573 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 DIP2CQ9Y2E4 1556 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 NSD3Q9BZ95 1437 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 LTN1O94822 1766 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 A0A0G2JND7 137 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 HIGD1CA8MV81 97 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 H7BZZ5 65 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 SFT2D2O95562 160 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 APOC3P02656 99 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 PRB1P04280 392 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 IGKV4-1P06312 121 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 UNQ6190/PRO20217Q6UXQ8 127 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 NDUFA11Q86Y39 141 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 FAM223AQ8IWN6 122 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 Q8N6K4 173 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 CYP4F30PQ9H0H9 118 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 CDC42SE2Q9NRR3 84 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 HIGD1BQ9P298 99 aa0.84□□□□□ -2.27
SNORA40.19-201ENST00000390846 ERVK-7P63135 1459 aa0.84□□□□□ -2.28
SNORA40.19-201ENST00000390846 MLH3Q9UHC1 1453 aa0.84□□□□□ -2.28
SNORA40.19-201ENST00000390846 TECTAO75443 2155 aa0.84□□□□□ -2.28
SNORA40.19-201ENST00000390846 CADP27708 2225 aa0.84□□□□□ -2.28
SNORA40.19-201ENST00000390846 ZMYM4Q5VZL5 1548 aa0.84□□□□□ -2.28
SNORA40.19-201ENST00000390846 EHBP1L1Q8N3D4 1523 aa0.84□□□□□ -2.28
SNORA40.19-201ENST00000390846 KIF20BQ96Q89 1820 aa0.83□□□□□ -2.28
SNORA40.19-201ENST00000390846 ASCC3Q8N3C0 2202 aaKnown RBP0.83□□□□□ -2.28
SNORA40.19-201ENST00000390846 IGKV2-40A0A087WW87 121 aaPredicted RBP0.83□□□□□ -2.28
SNORA40.19-201ENST00000390846 IGLV3-32A0A0A0MS00 114 aa0.83□□□□□ -2.28
SNORA40.19-201ENST00000390846 CRYM-AS1A6NIL9 109 aa0.83□□□□□ -2.28
SNORA40.19-201ENST00000390846 A6NIN4 97 aa0.83□□□□□ -2.28
SNORA40.19-201ENST00000390846 CHKB-CPT1BH3BT56 60 aa0.83□□□□□ -2.28
SNORA40.19-201ENST00000390846 HMGN4O00479 90 aa0.83□□□□□ -2.28
SNORA40.19-201ENST00000390846 IGKV2D-40P01614 121 aaPredicted RBP0.83□□□□□ -2.28
SNORA40.19-201ENST00000390846 FAUP35544 74 aaKnown RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms