RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CDK13Q14004 1512 aaKnown RBP0.99□□□□□ -2.25
TRAV40-201ENST00000390467 MGAMO43451 1857 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 CPAMD8Q8IZJ3 1885 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 CDK12Q9NYV4 1490 aaPredicted RBP0.99□□□□□ -2.25
TRAV40-201ENST00000390467 BTAF1O14981 1849 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 STRCP1A6NGW2 1772 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 MUC22E2RYF6 1773 aaPredicted RBP0.98□□□□□ -2.25
TRAV40-201ENST00000390467 RGPD2P0DJD1 1756 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 MYO7BQ6PIF6 2116 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 WDR90Q96KV7 1748 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 TNS1Q9HBL0 1735 aaKnown RBP0.98□□□□□ -2.25
TRAV40-201ENST00000390467 ZFHX3Q15911 3703 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 COL4A6Q14031 1691 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 ABCA9Q8IUA7 1624 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 MAP3K4Q9Y6R4 1608 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 DLG5Q8TDM6 1919 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 TRAV10A0A0B4J240 114 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 TRAV22A0A0B4J277 110 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 A0A0G2JND7 137 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 ODF3BA8MYP8 253 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 PRB4P10163 310 aaPredicted RBP0.98□□□□□ -2.25
TRAV40-201ENST00000390467 SMIM11AP58511 58 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 UBE2D3P61077 147 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 UBE2D2P62837 147 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 KRTAP25-1Q3LHN0 102 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 DEFB121Q5J5C9 76 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 SPANXN5Q5MJ07 72 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 Q5VV11 94 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 RPL7L1Q6DKI1 246 aaKnown RBP0.98□□□□□ -2.25
TRAV40-201ENST00000390467 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.98□□□□□ -2.25
TRAV40-201ENST00000390467 FAM223AQ8IWN6 122 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 SPTSSBQ8NFR3 76 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 Q8TAT8 98 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 CMTM2Q8TAZ6 248 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 FAM167A-AS1Q96KT0 104 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 TIMM21Q9BVV7 248 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 KCPQ6ZWJ8 1503 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 LTBP2Q14767 1821 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 LAMB1P07942 1786 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 PTPRMP28827 1452 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 C1orf167Q5SNV9 1468 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 SHANK2Q9UPX8 1470 aa0.98□□□□□ -2.25
TRAV40-201ENST00000390467 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.98□□□□□ -2.25
TRAV40-201ENST00000390467 DNAJC13O75165 2243 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 RTTNQ86VV8 2226 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 SHROOM2Q13796 1616 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 UNC13BO14795 1591 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 SLX4Q8IY92 1834 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 TRBV7-3A0A075B6L6 115 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 TRAV12-1A0A0B4J245 112 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 TEX49A0A1B0GTD5 131 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 C10orf142B7Z368 130 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 ERC2-IT1O76042 136 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 TFF1P04155 84 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 COX8AP10176 69 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 ZNF56Q15929 161 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 TMEM170BQ5T4T1 132 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 ZNF818PQ6ZRF7 136 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 NDUFA11Q86Y39 141 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 Q8N6K4 173 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 C9orf163Q8N9P6 203 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 TMEM254Q8TBM7 123 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 IFI27L1Q96BM0 104 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 MANBALQ9NQG1 85 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 PRO1854Q9UHT4 67 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 C22orf24Q9Y442 160 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 LHFPL6Q9Y693 200 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 TOP2AP11388 1531 aaKnown RBP0.97□□□□□ -2.25
TRAV40-201ENST00000390467 NEXMIFQ5QGS0 1516 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 RGPD8O14715 1765 aaPredicted RBP0.97□□□□□ -2.25
TRAV40-201ENST00000390467 RGPD5Q99666 1765 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 ARFGEF2Q9Y6D5 1785 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 CR1P17927 2039 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 NWD2Q9ULI1 1742 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 IQSEC2Q5JU85 1478 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 LRRC9Q6ZRR7 1453 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 LRP5O75197 1615 aa0.97□□□□□ -2.25
TRAV40-201ENST00000390467 PLXNC1O60486 1568 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 A0A1B0GUL6 1792 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 URB2Q14146 1524 aaKnown RBP0.96□□□□□ -2.26
TRAV40-201ENST00000390467 DOCK10Q96BY6 2186 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 RGPD1P0DJD0 1748 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 ITSN1Q15811 1721 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 UBR1Q8IWV7 1749 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 TRBV25-1A0A075B6N4 114 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 TRAV12-3A0A0B4J271 114 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 A0A0J9YX75 114 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 A0A1W2PNM2 257 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 SDHAF1A6NFY7 115 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 FAM223BA6NKX1 122 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 TMEM14DPA8MWL7 114 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 IGHV3-33P01772 117 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 PRB1P04280 392 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 C3orf79P0CE67 100 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 C10orf128Q5T292 105 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 XAF1Q6GPH4 301 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 ZNF833PQ6ZTB9 187 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 LIMD2Q9BT23 127 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 R4GN34 69 aa0.96□□□□□ -2.26
TRAV40-201ENST00000390467 KMT2BQ9UMN6 2715 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms