RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 IGLV4-3A0A075B6K6 122 aa10.69□□□□□ -0.7
RTF1-201ENST00000389629 TRBV30A0A0K0K1B3 111 aa10.69□□□□□ -0.7
RTF1-201ENST00000389629 PRB1P04280 392 aa10.69□□□□□ -0.7
RTF1-201ENST00000389629 UBE2D3P61077 147 aa10.69□□□□□ -0.7
RTF1-201ENST00000389629 UBE2D2P62837 147 aa10.69□□□□□ -0.7
RTF1-201ENST00000389629 SDIM1Q6ZPB5 146 aa10.69□□□□□ -0.7
RTF1-201ENST00000389629 C5orf38Q86SI9 138 aa10.69□□□□□ -0.7
RTF1-201ENST00000389629 C14orf132Q9NPU4 83 aa10.69□□□□□ -0.7
RTF1-201ENST00000389629 CRLF1O75462 422 aa10.68□□□□□ -0.7
RTF1-201ENST00000389629 IGHV4-59P01825 116 aa10.68□□□□□ -0.7
RTF1-201ENST00000389629 Q8N6K4 173 aa10.68□□□□□ -0.7
RTF1-201ENST00000389629 CLPSL1A2RUU4 121 aa10.68□□□□□ -0.7
RTF1-201ENST00000389629 LECT2O14960 151 aa10.68□□□□□ -0.7
RTF1-201ENST00000389629 TSPEAR-AS2P59090 65 aa10.68□□□□□ -0.7
RTF1-201ENST00000389629 DEFB136Q30KP8 78 aa10.68□□□□□ -0.7
RTF1-201ENST00000389629 CDKN2A-AS1Q9UH64 79 aa10.68□□□□□ -0.7
RTF1-201ENST00000389629 PCSK5Q92824 1860 aa10.68□□□□□ -0.7
RTF1-201ENST00000389629 SONP18583 2426 aaKnown RBP10.68□□□□□ -0.7
RTF1-201ENST00000389629 RNASE3P12724 160 aaKnown RBP10.67□□□□□ -0.7
RTF1-201ENST00000389629 UQCRQO14949 82 aa10.67□□□□□ -0.7
RTF1-201ENST00000389629 CLPSL2Q6UWE3 100 aa10.67□□□□□ -0.7
RTF1-201ENST00000389629 APRG1Q8IVJ8 170 aa10.67□□□□□ -0.7
RTF1-201ENST00000389629 TMEM263Q8WUH6 116 aaKnown RBP10.67□□□□□ -0.7
RTF1-201ENST00000389629 IGLV2-18A0A075B6J9 118 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 hADV29S1A0JD25 119 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 SVIPQ8NHG7 77 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 NOTCH2Q04721 2471 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 ATP5G1P05496 136 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
RTF1-201ENST00000389629 FBXL19-AS1Q494R0 122 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 MYO18BQ8IUG5 2567 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 VCANP13611 3396 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 IGHV4-4A0A075B6R2 117 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 H7C423 109 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 Q6ZSV7 163 aa10.66□□□□□ -0.7
RTF1-201ENST00000389629 COX8CQ7Z4L0 72 aa10.65□□□□□ -0.7
RTF1-201ENST00000389629 ORMDL1Q9P0S3 153 aa10.65□□□□□ -0.7
RTF1-201ENST00000389629 LAMA1P25391 3075 aa10.65□□□□□ -0.7
RTF1-201ENST00000389629 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.7
RTF1-201ENST00000389629 COX7A2LO14548 114 aa10.65□□□□□ -0.7
RTF1-201ENST00000389629 IGHG2P01859 326 aa10.65□□□□□ -0.7
RTF1-201ENST00000389629 SS18Q15532 418 aa10.65□□□□□ -0.7
RTF1-201ENST00000389629 DEFB112Q30KQ8 113 aa10.65□□□□□ -0.7
RTF1-201ENST00000389629 M0QY20 66 aa10.65□□□□□ -0.71
RTF1-201ENST00000389629 LMO4P61968 165 aa10.65□□□□□ -0.71
RTF1-201ENST00000389629 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
RTF1-201ENST00000389629 PROK1P58294 105 aa10.64□□□□□ -0.71
RTF1-201ENST00000389629 RBM3P98179 157 aaKnown RBP10.64□□□□□ -0.71
RTF1-201ENST00000389629 MIR7-3HGQ8N6C7 128 aa10.64□□□□□ -0.71
RTF1-201ENST00000389629 PRO0461Q9UI25 63 aa10.64□□□□□ -0.71
RTF1-201ENST00000389629 A0A0J9YX75 114 aa10.64□□□□□ -0.71
RTF1-201ENST00000389629 TRBV27A0A0K0K1C4 114 aa10.64□□□□□ -0.71
RTF1-201ENST00000389629 C1orf43Q9BWL3 253 aa10.64□□□□□ -0.71
RTF1-201ENST00000389629 CCDC168Q8NDH2 2452 aa10.64□□□□□ -0.71
RTF1-201ENST00000389629 IGIPA6NJ69 53 aa10.63□□□□□ -0.71
RTF1-201ENST00000389629 XCL1P47992 114 aa10.63□□□□□ -0.71
RTF1-201ENST00000389629 LINC01356Q8N9X3 169 aa10.63□□□□□ -0.71
RTF1-201ENST00000389629 TMEM61Q8N0U2 210 aa10.63□□□□□ -0.71
RTF1-201ENST00000389629 IGLV4-69A0A075B6H9 119 aa10.63□□□□□ -0.71
RTF1-201ENST00000389629 A0A096LPF7 62 aa10.63□□□□□ -0.71
RTF1-201ENST00000389629 ZNF580Q9UK33 172 aa10.62□□□□□ -0.71
RTF1-201ENST00000389629 TLN2Q9Y4G6 2542 aa10.62□□□□□ -0.71
RTF1-201ENST00000389629 K7EMT4 169 aa10.62□□□□□ -0.71
RTF1-201ENST00000389629 NDUFA7O95182 113 aa10.62□□□□□ -0.71
RTF1-201ENST00000389629 NOP10Q9NPE3 64 aaKnown RBP10.62□□□□□ -0.71
RTF1-201ENST00000389629 NSUN5P1Q3KNT7 163 aa10.62□□□□□ -0.71
RTF1-201ENST00000389629 IGHV4-30-2A0A087WSY4 118 aa10.62□□□□□ -0.71
RTF1-201ENST00000389629 PIK3CD-AS1Q5SR53 167 aa10.62□□□□□ -0.71
RTF1-201ENST00000389629 LST1O00453 97 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 PF4P02776 101 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 LINC00694P0DN24 101 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 SLURP1P55000 103 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 DSCR9P59020 149 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 LINC00308Q8TCZ7 52 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 PSMG3-AS1Q96PY0 264 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 H0YGX0 51 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 SZT2Q5T011 3432 aa10.61□□□□□ -0.71
RTF1-201ENST00000389629 TRAV23DV6A0A075B6W5 121 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 M0QXV9 152 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 GHRHP01286 108 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 GPHB5Q86YW7 130 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 MRAPQ8TCY5 172 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 SHISA2Q6UWI4 295 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 SPANXCQ9NY87 97 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 ANKRD11Q6UB99 2663 aaPredicted RBP10.6□□□□□ -0.71
RTF1-201ENST00000389629 IGHV4OR15-8A0A075B7B6 117 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 A0A087WW49 117 aa10.6□□□□□ -0.71
RTF1-201ENST00000389629 TSHBP01222 138 aa10.59□□□□□ -0.71
RTF1-201ENST00000389629 ELANEP08246 267 aa10.59□□□□□ -0.71
RTF1-201ENST00000389629 USP9YO00507 2555 aaPredicted RBP10.59□□□□□ -0.71
RTF1-201ENST00000389629 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
RTF1-201ENST00000389629 COX7B2Q8TF08 81 aa10.59□□□□□ -0.71
RTF1-201ENST00000389629 DSCR8Q96T75 97 aa10.58□□□□□ -0.72
RTF1-201ENST00000389629 SLPIP03973 132 aa10.58□□□□□ -0.72
RTF1-201ENST00000389629 C11orf71Q6IPW1 123 aa10.58□□□□□ -0.72
RTF1-201ENST00000389629 HIST2H2BCQ6DN03 193 aa10.58□□□□□ -0.72
RTF1-201ENST00000389629 HIST2H2BDQ6DRA6 164 aa10.58□□□□□ -0.72
RTF1-201ENST00000389629 CDSNQ15517 529 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms