RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ATXN8Q156A1 80 aa9.28□□□□□ -0.92
PRPF40B-202ENST00000380281 ITLN2Q8WWU7 325 aaPredicted RBP9.28□□□□□ -0.92
PRPF40B-202ENST00000380281 U3KQE9 123 aa9.28□□□□□ -0.92
PRPF40B-202ENST00000380281 IGLV4-69A0A075B6H9 119 aa9.28□□□□□ -0.92
PRPF40B-202ENST00000380281 OVOL1O14753 267 aa9.28□□□□□ -0.92
PRPF40B-202ENST00000380281 SYNJ2BPP57105 145 aa9.28□□□□□ -0.92
PRPF40B-202ENST00000380281 C9orf153Q5TBE3 101 aa9.28□□□□□ -0.92
PRPF40B-202ENST00000380281 MUSTN1Q8IVN3 82 aa9.28□□□□□ -0.92
PRPF40B-202ENST00000380281 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
PRPF40B-202ENST00000380281 IGHV4-59P01825 116 aa9.27□□□□□ -0.93
PRPF40B-202ENST00000380281 SRSF2Q01130 221 aaKnown RBP9.27□□□□□ -0.93
PRPF40B-202ENST00000380281 DEFB136Q30KP8 78 aa9.27□□□□□ -0.93
PRPF40B-202ENST00000380281 CCL19Q99731 98 aa9.27□□□□□ -0.93
PRPF40B-202ENST00000380281 PRSS2P07478 247 aa9.27□□□□□ -0.93
PRPF40B-202ENST00000380281 PROK1P58294 105 aa9.27□□□□□ -0.93
PRPF40B-202ENST00000380281 C5orf47Q569G3 176 aa9.27□□□□□ -0.93
PRPF40B-202ENST00000380281 NDUFA4O00483 81 aa9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 TRIAP1O43715 76 aa9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 TSHBP01222 138 aa9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 PMVKQ15126 192 aa9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 DAZ1Q9NQZ3 744 aaKnown RBP9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 TRBV10-2A0A0K0K1G8 114 aa9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 FAM223BA6NKX1 122 aa9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 FAM223AQ8IWN6 122 aa9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 Q6ZSV7 163 aa9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 FAM19A5Q7Z5A7 132 aaPredicted RBP9.26□□□□□ -0.93
PRPF40B-202ENST00000380281 A0A0U1RRA0 63 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 J3QQQ9 107 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 RPL13AP40429 203 aaKnown RBP9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 C11orf44Q8N8P7 122 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 ZNRF2Q8NHG8 242 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 DNAJC30Q96LL9 226 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 SPXQ9BT56 116 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 Q9UF83 564 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 SMIM9A6NGZ8 99 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 RNF223E7ERA6 249 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 HERVK_113P63121 156 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 CLEC2BQ92478 149 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 EDA2RQ9HAV5 297 aa9.25□□□□□ -0.93
PRPF40B-202ENST00000380281 H7C423 109 aa9.24□□□□□ -0.93
PRPF40B-202ENST00000380281 ZNF876PQ49A33 203 aa9.24□□□□□ -0.93
PRPF40B-202ENST00000380281 TMEM190Q8WZ59 177 aa9.24□□□□□ -0.93
PRPF40B-202ENST00000380281 PIMREGQ9BSJ6 248 aa9.24□□□□□ -0.93
PRPF40B-202ENST00000380281 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
PRPF40B-202ENST00000380281 A8MZ25 164 aa9.24□□□□□ -0.93
PRPF40B-202ENST00000380281 AMELXQ99217 191 aa9.24□□□□□ -0.93
PRPF40B-202ENST00000380281 A0A0J9YXV3 536 aa9.24□□□□□ -0.93
PRPF40B-202ENST00000380281 SOCS3O14543 225 aa9.24□□□□□ -0.93
PRPF40B-202ENST00000380281 IGHV3OR16-12A0A075B7B8 117 aa9.23□□□□□ -0.93
PRPF40B-202ENST00000380281 IGHV3-38A0A0C4DH36 116 aa9.23□□□□□ -0.93
PRPF40B-202ENST00000380281 NDUFA7O95182 113 aa9.23□□□□□ -0.93
PRPF40B-202ENST00000380281 SPANXA1Q9NS26 97 aa9.23□□□□□ -0.93
PRPF40B-202ENST00000380281 IGHV3-16A0A0C4DH30 117 aa9.23□□□□□ -0.93
PRPF40B-202ENST00000380281 MRPL53Q96EL3 112 aaKnown RBP9.23□□□□□ -0.93
PRPF40B-202ENST00000380281 IGHV4-4A0A075B6R2 117 aa9.22□□□□□ -0.93
PRPF40B-202ENST00000380281 UCNP55089 124 aa9.22□□□□□ -0.93
PRPF40B-202ENST00000380281 IGHG2P01859 326 aa9.22□□□□□ -0.93
PRPF40B-202ENST00000380281 DEFB112Q30KQ8 113 aa9.22□□□□□ -0.93
PRPF40B-202ENST00000380281 TMEM101Q96IK0 257 aa9.22□□□□□ -0.93
PRPF40B-202ENST00000380281 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.93
PRPF40B-202ENST00000380281 VCYO14598 125 aa9.21□□□□□ -0.93
PRPF40B-202ENST00000380281 LINC00315P59091 139 aa9.21□□□□□ -0.93
PRPF40B-202ENST00000380281 M0R2P5 195 aa9.21□□□□□ -0.94
PRPF40B-202ENST00000380281 C18orf65Q6ZTR6 163 aa9.21□□□□□ -0.94
PRPF40B-202ENST00000380281 C3orf22Q8N5N4 141 aa9.2□□□□□ -0.94
PRPF40B-202ENST00000380281 MSMBP08118 114 aa9.2□□□□□ -0.94
PRPF40B-202ENST00000380281 A0A0B4J2C4 111 aa9.2□□□□□ -0.94
PRPF40B-202ENST00000380281 POM121L12Q8N7R1 296 aa9.2□□□□□ -0.94
PRPF40B-202ENST00000380281 USMG5Q96IX5 58 aa9.2□□□□□ -0.94
PRPF40B-202ENST00000380281 DAND5Q8N907 189 aa9.19□□□□□ -0.94
PRPF40B-202ENST00000380281 ZNF625Q96I27 306 aaPredicted RBP9.19□□□□□ -0.94
PRPF40B-202ENST00000380281 LENEPQ9Y5L5 61 aa9.19□□□□□ -0.94
PRPF40B-202ENST00000380281 TRBV7-7A0A0K0K1E9 115 aa9.19□□□□□ -0.94
PRPF40B-202ENST00000380281 IGIPA6NJ69 53 aa9.19□□□□□ -0.94
PRPF40B-202ENST00000380281 DCANP1Q8TF63 244 aa9.19□□□□□ -0.94
PRPF40B-202ENST00000380281 KIF25-AS1Q9Y6Z4 181 aa9.19□□□□□ -0.94
PRPF40B-202ENST00000380281 FLNAP21333 2647 aaKnown RBP9.19□□□□□ -0.94
PRPF40B-202ENST00000380281 SNRPD3P62318 126 aaKnown RBP9.18□□□□□ -0.94
PRPF40B-202ENST00000380281 A6NDX4 124 aa9.18□□□□□ -0.94
PRPF40B-202ENST00000380281 POLR2KP53803 58 aaKnown RBP9.18□□□□□ -0.94
PRPF40B-202ENST00000380281 DEFB131AP59861 70 aa9.18□□□□□ -0.94
PRPF40B-202ENST00000380281 ICOSQ9Y6W8 199 aa9.18□□□□□ -0.94
PRPF40B-202ENST00000380281 J3KT08 172 aa9.18□□□□□ -0.94
PRPF40B-202ENST00000380281 C10orf105Q8TEF2 133 aa9.18□□□□□ -0.94
PRPF40B-202ENST00000380281 SMCR5Q8TEV8 140 aa9.18□□□□□ -0.94
PRPF40B-202ENST00000380281 PAPPA-AS1Q5QFB9 102 aa9.17□□□□□ -0.94
PRPF40B-202ENST00000380281 IGHV4OR15-8A0A075B7B6 117 aa9.17□□□□□ -0.94
PRPF40B-202ENST00000380281 A0A087WW49 117 aa9.17□□□□□ -0.94
PRPF40B-202ENST00000380281 TRBV30A0A0K0K1B3 111 aa9.17□□□□□ -0.94
PRPF40B-202ENST00000380281 GCN1Q92616 2671 aaKnown RBP9.16□□□□□ -0.94
PRPF40B-202ENST00000380281 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.16□□□□□ -0.94
PRPF40B-202ENST00000380281 IGKV2-29A2NJV5 120 aaPredicted RBP9.16□□□□□ -0.94
PRPF40B-202ENST00000380281 CD28P10747 220 aa9.16□□□□□ -0.94
PRPF40B-202ENST00000380281 SLURP1P55000 103 aa9.16□□□□□ -0.94
PRPF40B-202ENST00000380281 C19orf54Q5BKX5 351 aa9.16□□□□□ -0.94
PRPF40B-202ENST00000380281 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.16□□□□□ -0.94
PRPF40B-202ENST00000380281 TMEM223A0PJW6 202 aa9.16□□□□□ -0.94
PRPF40B-202ENST00000380281 KLLNB2CW77 178 aa9.16□□□□□ -0.94
PRPF40B-202ENST00000380281 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms