RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 PSMB8P28062 276 aa12.27□□□□□ -0.45
PCDHA1-201ENST00000378133 RPL13AP40429 203 aaKnown RBP12.27□□□□□ -0.45
PCDHA1-201ENST00000378133 C15orf53Q8NAA6 179 aa12.27□□□□□ -0.45
PCDHA1-201ENST00000378133 ODF3Q96PU9 254 aa12.27□□□□□ -0.45
PCDHA1-201ENST00000378133 M0R2P5 195 aa12.26□□□□□ -0.45
PCDHA1-201ENST00000378133 Q6Q795 121 aa12.26□□□□□ -0.45
PCDHA1-201ENST00000378133 CREBBPQ92793 2442 aa12.26□□□□□ -0.45
PCDHA1-201ENST00000378133 TRIAP1O43715 76 aa12.26□□□□□ -0.45
PCDHA1-201ENST00000378133 A0A0J9YXV3 536 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 TRBV30A0A0K0K1B3 111 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 H3BMM0 161 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 IGHV4-59P01825 116 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 ZNF56Q15929 161 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 UBE2WQ96B02 151 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 ZNF580Q9UK33 172 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 IGHV3-16A0A0C4DH30 117 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 C5orf47Q569G3 176 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 DOPEY1Q5JWR5 2465 aa12.25□□□□□ -0.45
PCDHA1-201ENST00000378133 PRSS2P07478 247 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 RHOHQ15669 191 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 NSUN5P1Q3KNT7 163 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 LINC01600Q96MT4 127 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 USP9YO00507 2555 aaPredicted RBP12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 UTP20O75691 2785 aaKnown RBP12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 B4DSR2 109 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 C2orf82Q6UX34 121 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 UBR5O95071 2799 aaPredicted RBP12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 A0A0J9YX75 114 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 ADARB2-AS1A8MUL3 147 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 M0QY20 66 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 DEFB112Q30KQ8 113 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 NRGNQ92686 78 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 C9orf85Q96MD7 179 aa12.24□□□□□ -0.45
PCDHA1-201ENST00000378133 SPINK13Q1W4C9 94 aa12.23□□□□□ -0.45
PCDHA1-201ENST00000378133 SNRPD3P62318 126 aaKnown RBP12.23□□□□□ -0.45
PCDHA1-201ENST00000378133 C20orf203Q8NBC4 194 aa12.23□□□□□ -0.45
PCDHA1-201ENST00000378133 MYO18BQ8IUG5 2567 aa12.22□□□□□ -0.45
PCDHA1-201ENST00000378133 DUX5Q96PT3 197 aa12.22□□□□□ -0.45
PCDHA1-201ENST00000378133 ZANQ9Y493 2812 aa12.21□□□□□ -0.45
PCDHA1-201ENST00000378133 IGHV3-30-3P0DP02 117 aa12.21□□□□□ -0.45
PCDHA1-201ENST00000378133 SYNJ2BPP57105 145 aa12.21□□□□□ -0.45
PCDHA1-201ENST00000378133 IGLV4-3A0A075B6K6 122 aa12.21□□□□□ -0.46
PCDHA1-201ENST00000378133 H7C423 109 aa12.21□□□□□ -0.46
PCDHA1-201ENST00000378133 K7EQG2 157 aa12.21□□□□□ -0.46
PCDHA1-201ENST00000378133 LOC107984640A0A0U1RRK4 108 aa12.2□□□□□ -0.46
PCDHA1-201ENST00000378133 ICOSQ9Y6W8 199 aa12.2□□□□□ -0.46
PCDHA1-201ENST00000378133 IGHV1OR15-1A0A075B7D0 117 aa12.2□□□□□ -0.46
PCDHA1-201ENST00000378133 TIMM21Q9BVV7 248 aa12.2□□□□□ -0.46
PCDHA1-201ENST00000378133 I3L3M4 83 aa12.19□□□□□ -0.46
PCDHA1-201ENST00000378133 COX6CP09669 75 aa12.19□□□□□ -0.46
PCDHA1-201ENST00000378133 LITAFQ99732 161 aa12.19□□□□□ -0.46
PCDHA1-201ENST00000378133 PRRC2AP48634 2157 aaKnown RBP12.19□□□□□ -0.46
PCDHA1-201ENST00000378133 KMT2BQ9UMN6 2715 aaPredicted RBP12.19□□□□□ -0.46
PCDHA1-201ENST00000378133 LINC00694P0DN24 101 aa12.18□□□□□ -0.46
PCDHA1-201ENST00000378133 ADAMTSL4-AS1Q5T5F5 129 aa12.18□□□□□ -0.46
PCDHA1-201ENST00000378133 TRAV8-3A0A0A6YYJ7 113 aa12.17□□□□□ -0.46
PCDHA1-201ENST00000378133 MAPK1IP1LQ8NDC0 245 aa12.17□□□□□ -0.46
PCDHA1-201ENST00000378133 POLQO75417 2590 aa12.17□□□□□ -0.46
PCDHA1-201ENST00000378133 H3BT86 120 aa12.17□□□□□ -0.46
PCDHA1-201ENST00000378133 HTN1P15515 57 aa12.17□□□□□ -0.46
PCDHA1-201ENST00000378133 CLEC2BQ92478 149 aa12.17□□□□□ -0.46
PCDHA1-201ENST00000378133 DUX3Q96PT4 197 aa12.17□□□□□ -0.46
PCDHA1-201ENST00000378133 LINC01587Q99440 93 aa12.17□□□□□ -0.46
PCDHA1-201ENST00000378133 NPC2P61916 151 aa12.16□□□□□ -0.46
PCDHA1-201ENST00000378133 Q6ZSV7 163 aa12.16□□□□□ -0.46
PCDHA1-201ENST00000378133 CHCHD5Q9BSY4 110 aa12.16□□□□□ -0.46
PCDHA1-201ENST00000378133 TMEM126AQ9H061 195 aa12.16□□□□□ -0.46
PCDHA1-201ENST00000378133 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
PCDHA1-201ENST00000378133 SMIM9A6NGZ8 99 aa12.15□□□□□ -0.46
PCDHA1-201ENST00000378133 CD28P10747 220 aa12.15□□□□□ -0.46
PCDHA1-201ENST00000378133 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
PCDHA1-201ENST00000378133 NDUFA12Q9UI09 145 aa12.15□□□□□ -0.46
PCDHA1-201ENST00000378133 SPANXDQ9BXN6 97 aa12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 SPANXA1Q9NS26 97 aa12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 CENPEQ02224 2701 aa12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 IGHV1-58A0A0C4DH39 117 aa12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 HOXD3P31249 432 aaPredicted RBP12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 LINC01356Q8N9X3 169 aa12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 ANKRD17O75179 2603 aaKnown RBP12.14□□□□□ -0.47
PCDHA1-201ENST00000378133 MIAQ16674 131 aa12.13□□□□□ -0.47
PCDHA1-201ENST00000378133 MXRA5Q9NR99 2828 aa12.13□□□□□ -0.47
PCDHA1-201ENST00000378133 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
PCDHA1-201ENST00000378133 CEMP1Q6PRD7 247 aaPredicted RBP12.13□□□□□ -0.47
PCDHA1-201ENST00000378133 DNAJC30Q96LL9 226 aa12.13□□□□□ -0.47
PCDHA1-201ENST00000378133 CHD6Q8TD26 2715 aa12.12□□□□□ -0.47
PCDHA1-201ENST00000378133 LST1O00453 97 aa12.12□□□□□ -0.47
PCDHA1-201ENST00000378133 RBMY1A1P0DJD3 496 aaKnown RBP12.12□□□□□ -0.47
PCDHA1-201ENST00000378133 RBMY1CP0DJD4 496 aa12.12□□□□□ -0.47
PCDHA1-201ENST00000378133 RBMY1FQ15415 496 aaKnown RBP12.12□□□□□ -0.47
PCDHA1-201ENST00000378133 RNASE13Q5GAN3 156 aaKnown RBP12.12□□□□□ -0.47
PCDHA1-201ENST00000378133 KNCNA6PVL3 124 aa12.12□□□□□ -0.47
PCDHA1-201ENST00000378133 PRM2P04554 102 aa12.12□□□□□ -0.47
PCDHA1-201ENST00000378133 PYGO1Q9Y3Y4 419 aa12.12□□□□□ -0.47
PCDHA1-201ENST00000378133 FAM240AA0A1B0GVK7 77 aa12.11□□□□□ -0.47
PCDHA1-201ENST00000378133 A8MZ25 164 aa12.11□□□□□ -0.47
PCDHA1-201ENST00000378133 PROK1P58294 105 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms