RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 C11orf86A6NJI1 115 aa12.55□□□□□ -0.4
NKX2-2-201ENST00000377142 E9PLD3 99 aa12.55□□□□□ -0.4
NKX2-2-201ENST00000377142 NPSP0C0P6 89 aa12.55□□□□□ -0.4
NKX2-2-201ENST00000377142 OVOL2Q9BRP0 275 aa12.55□□□□□ -0.4
NKX2-2-201ENST00000377142 TTTY13Q9BZ97 58 aa12.55□□□□□ -0.4
NKX2-2-201ENST00000377142 IGLV4-3A0A075B6K6 122 aa12.55□□□□□ -0.4
NKX2-2-201ENST00000377142 TRAV8-6A0A0B4J262 113 aa12.55□□□□□ -0.4
NKX2-2-201ENST00000377142 K7EQD1 137 aa12.55□□□□□ -0.4
NKX2-2-201ENST00000377142 SEC11AP67812 179 aa12.55□□□□□ -0.4
NKX2-2-201ENST00000377142 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
NKX2-2-201ENST00000377142 CIDEAO60543 219 aa12.54□□□□□ -0.4
NKX2-2-201ENST00000377142 COTL1Q14019 142 aa12.54□□□□□ -0.4
NKX2-2-201ENST00000377142 SPATA3Q8NHX4 192 aa12.54□□□□□ -0.4
NKX2-2-201ENST00000377142 TRBV25-1A0A075B6N4 114 aa12.53□□□□□ -0.4
NKX2-2-201ENST00000377142 ZNF25P17030 456 aaPredicted RBP12.53□□□□□ -0.4
NKX2-2-201ENST00000377142 HERVK_113P61574 105 aa12.53□□□□□ -0.4
NKX2-2-201ENST00000377142 CHCHD7Q9BUK0 85 aa12.53□□□□□ -0.4
NKX2-2-201ENST00000377142 CRYBA4P53673 196 aa12.53□□□□□ -0.4
NKX2-2-201ENST00000377142 CHAC1Q9BUX1 264 aa12.53□□□□□ -0.4
NKX2-2-201ENST00000377142 TRBV7-3A0A075B6L6 115 aa12.52□□□□□ -0.4
NKX2-2-201ENST00000377142 RPL36AP83881 106 aaKnown RBP12.52□□□□□ -0.4
NKX2-2-201ENST00000377142 NFE4Q86UQ8 179 aa12.52□□□□□ -0.4
NKX2-2-201ENST00000377142 ORAOV1Q8WV07 137 aa12.52□□□□□ -0.4
NKX2-2-201ENST00000377142 RPL36ALQ969Q0 106 aaKnown RBP12.52□□□□□ -0.4
NKX2-2-201ENST00000377142 OPRPNQ99935 248 aaPredicted RBP12.52□□□□□ -0.4
NKX2-2-201ENST00000377142 VCX2Q9H322 139 aa12.52□□□□□ -0.4
NKX2-2-201ENST00000377142 SPANXA1Q9NS26 97 aa12.52□□□□□ -0.4
NKX2-2-201ENST00000377142 EMP1P54849 157 aa12.52□□□□□ -0.41
NKX2-2-201ENST00000377142 MAPKAPK5-AS1Q8N8E1 139 aa12.52□□□□□ -0.41
NKX2-2-201ENST00000377142 PHLDA1Q8WV24 401 aaPredicted RBP12.52□□□□□ -0.41
NKX2-2-201ENST00000377142 PRADC1Q9BSG0 188 aa12.52□□□□□ -0.41
NKX2-2-201ENST00000377142 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
NKX2-2-201ENST00000377142 TRGV2A0A075B6R0 118 aa12.51□□□□□ -0.41
NKX2-2-201ENST00000377142 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
NKX2-2-201ENST00000377142 GAGE7O76087 117 aa12.51□□□□□ -0.41
NKX2-2-201ENST00000377142 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
NKX2-2-201ENST00000377142 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
NKX2-2-201ENST00000377142 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
NKX2-2-201ENST00000377142 ZNRF2Q8NHG8 242 aa12.51□□□□□ -0.41
NKX2-2-201ENST00000377142 ZMAT5Q9UDW3 170 aaKnown RBP12.51□□□□□ -0.41
NKX2-2-201ENST00000377142 IGHV3-38A0A0C4DH36 116 aa12.5□□□□□ -0.41
NKX2-2-201ENST00000377142 LINC00469Q8N7U9 141 aa12.5□□□□□ -0.41
NKX2-2-201ENST00000377142 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
NKX2-2-201ENST00000377142 AMELXQ99217 191 aa12.5□□□□□ -0.41
NKX2-2-201ENST00000377142 A6NDN8 102 aa12.49□□□□□ -0.41
NKX2-2-201ENST00000377142 GAGE1Q13065 139 aa12.49□□□□□ -0.41
NKX2-2-201ENST00000377142 TMEM170BQ5T4T1 132 aa12.49□□□□□ -0.41
NKX2-2-201ENST00000377142 SLC25A29Q8N8R3 303 aa12.49□□□□□ -0.41
NKX2-2-201ENST00000377142 UBE2D4Q9Y2X8 147 aa12.49□□□□□ -0.41
NKX2-2-201ENST00000377142 TAX1BP3O14907 124 aa12.49□□□□□ -0.41
NKX2-2-201ENST00000377142 DAZ4Q86SG3 579 aaKnown RBP12.49□□□□□ -0.41
NKX2-2-201ENST00000377142 DAZ3Q9NR90 486 aaKnown RBP12.49□□□□□ -0.41
NKX2-2-201ENST00000377142 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.47□□□□□ -0.41
NKX2-2-201ENST00000377142 IGKV2-29A2NJV5 120 aaPredicted RBP12.47□□□□□ -0.41
NKX2-2-201ENST00000377142 WFDC9Q8NEX5 89 aa12.47□□□□□ -0.41
NKX2-2-201ENST00000377142 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
NKX2-2-201ENST00000377142 SMIM9A6NGZ8 99 aa12.47□□□□□ -0.41
NKX2-2-201ENST00000377142 UBE2D3P61077 147 aa12.47□□□□□ -0.41
NKX2-2-201ENST00000377142 UBE2D2P62837 147 aa12.47□□□□□ -0.41
NKX2-2-201ENST00000377142 TAL2Q16559 108 aa12.47□□□□□ -0.41
NKX2-2-201ENST00000377142 FAM104AQ969W3 186 aa12.47□□□□□ -0.41
NKX2-2-201ENST00000377142 Q6ZVH6 145 aa12.46□□□□□ -0.41
NKX2-2-201ENST00000377142 KIR2DL5BQ8NHK3 375 aa12.46□□□□□ -0.41
NKX2-2-201ENST00000377142 WIPF1O43516 503 aa12.46□□□□□ -0.42
NKX2-2-201ENST00000377142 CEMP1Q6PRD7 247 aaPredicted RBP12.46□□□□□ -0.42
NKX2-2-201ENST00000377142 TIMM21Q9BVV7 248 aa12.46□□□□□ -0.42
NKX2-2-201ENST00000377142 TRGV4A0A0C4DH28 118 aa12.45□□□□□ -0.42
NKX2-2-201ENST00000377142 ZNF815PA8K554 130 aa12.45□□□□□ -0.42
NKX2-2-201ENST00000377142 A0A0J9YXV3 536 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 GAGE12JA6NER3 117 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 ZNF22P17026 224 aaPredicted RBP12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 GCSHP23434 173 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 APOC4P55056 127 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 MRPS36P82909 103 aaKnown RBP12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 GAGE4Q13068 117 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 GAGE5Q13069 117 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 X6R8D5 127 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 CEND1Q8N111 149 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 LINC00612Q8N6U2 182 aa12.44□□□□□ -0.42
NKX2-2-201ENST00000377142 TMEM223A0PJW6 202 aa12.43□□□□□ -0.42
NKX2-2-201ENST00000377142 Q6ZUT4 128 aa12.43□□□□□ -0.42
NKX2-2-201ENST00000377142 TM2D2Q9BX73 214 aa12.43□□□□□ -0.42
NKX2-2-201ENST00000377142 F8P00451 2351 aa12.43□□□□□ -0.42
NKX2-2-201ENST00000377142 H3BRM9 83 aa12.42□□□□□ -0.42
NKX2-2-201ENST00000377142 SMAGPQ0VAQ4 97 aa12.42□□□□□ -0.42
NKX2-2-201ENST00000377142 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
NKX2-2-201ENST00000377142 NOTCH3Q9UM47 2321 aa12.42□□□□□ -0.42
NKX2-2-201ENST00000377142 TENM1Q9UKZ4 2725 aa12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 FXYD2P54710 66 aa12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 FHL2Q14192 279 aa12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 HIST1H4GQ99525 98 aa12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 TEP1Q99973 2627 aaKnown RBP12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 LEPROTO15243 131 aa12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 RNASE13Q5GAN3 156 aaKnown RBP12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 DGAT2L7PQ6IED9 249 aa12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 SCGB1D4Q6XE38 83 aa12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 NTM-AS1Q6ZSK4 140 aa12.41□□□□□ -0.42
NKX2-2-201ENST00000377142 VWFP04275 2813 aa12.4□□□□□ -0.42
NKX2-2-201ENST00000377142 TINCRA0A1B0GVN0 87 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms