RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.2□□□□□ -0.78
GPC6-201ENST00000377047 ACACBO00763 2458 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 COX7BP24311 80 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 PSMB8P28062 276 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 LINC00467Q9BRT7 94 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 NOTCH2Q04721 2471 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.2□□□□□ -0.78
GPC6-201ENST00000377047 HIGD2AQ9BW72 106 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 ODF1Q14990 250 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 CDSNQ15517 529 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 LINC00322Q6ZN03 302 aaPredicted RBP10.19□□□□□ -0.78
GPC6-201ENST00000377047 CLEC2BQ92478 149 aa10.19□□□□□ -0.78
GPC6-201ENST00000377047 IGLV2-18A0A075B6J9 118 aa10.19□□□□□ -0.78
GPC6-201ENST00000377047 UFSP1Q6NVU6 142 aa10.19□□□□□ -0.78
GPC6-201ENST00000377047 SMR3AQ99954 134 aa10.19□□□□□ -0.78
GPC6-201ENST00000377047 TRAV10A0A0B4J240 114 aa10.19□□□□□ -0.78
GPC6-201ENST00000377047 A0A087WZ39 114 aa10.19□□□□□ -0.78
GPC6-201ENST00000377047 FXYD2P54710 66 aa10.18□□□□□ -0.78
GPC6-201ENST00000377047 SPG11Q96JI7 2443 aa10.18□□□□□ -0.78
GPC6-201ENST00000377047 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
GPC6-201ENST00000377047 IGKV3D-7A0A0C4DH55 119 aa10.18□□□□□ -0.78
GPC6-201ENST00000377047 CRIP3Q6Q6R5 217 aa10.18□□□□□ -0.78
GPC6-201ENST00000377047 H0Y9J4 135 aa10.18□□□□□ -0.78
GPC6-201ENST00000377047 M0R2N4 97 aa10.18□□□□□ -0.78
GPC6-201ENST00000377047 ACYP1P07311 99 aa10.18□□□□□ -0.78
GPC6-201ENST00000377047 COA6Q5JTJ3 125 aaKnown RBP10.18□□□□□ -0.78
GPC6-201ENST00000377047 PRB2P02812 416 aaPredicted RBP10.18□□□□□ -0.78
GPC6-201ENST00000377047 EIF4EBP1Q13541 118 aaPredicted RBP10.18□□□□□ -0.78
GPC6-201ENST00000377047 CFAP126Q5VTH2 177 aa10.17□□□□□ -0.78
GPC6-201ENST00000377047 WFDC10AQ9H1F0 79 aa10.17□□□□□ -0.78
GPC6-201ENST00000377047 TDRG1Q3Y452 100 aa10.17□□□□□ -0.78
GPC6-201ENST00000377047 PTPN13Q12923 2485 aa10.17□□□□□ -0.78
GPC6-201ENST00000377047 ANKHD1Q8IWZ3 2542 aaKnown RBP10.17□□□□□ -0.78
GPC6-201ENST00000377047 LINC01620Q4KN68 170 aa10.17□□□□□ -0.78
GPC6-201ENST00000377047 KIR2DL5BA0A0G2JN68 375 aa10.16□□□□□ -0.78
GPC6-201ENST00000377047 KIR2DL5BA0A0G2JPC4 375 aa10.16□□□□□ -0.78
GPC6-201ENST00000377047 Q6ZS46 218 aa10.16□□□□□ -0.78
GPC6-201ENST00000377047 FAM19A1Q7Z5A9 133 aa10.16□□□□□ -0.78
GPC6-201ENST00000377047 KIR2DL5AQ8N109 375 aa10.16□□□□□ -0.78
GPC6-201ENST00000377047 A0A1B0GX51 115 aa10.16□□□□□ -0.78
GPC6-201ENST00000377047 BBC3Q96PG8 261 aaPredicted RBP10.16□□□□□ -0.78
GPC6-201ENST00000377047 RBM3P98179 157 aaKnown RBP10.16□□□□□ -0.78
GPC6-201ENST00000377047 CITED1Q99966 193 aa10.15□□□□□ -0.78
GPC6-201ENST00000377047 A0A0B4J2C4 111 aa10.15□□□□□ -0.78
GPC6-201ENST00000377047 A0A096LNI7 61 aa10.15□□□□□ -0.78
GPC6-201ENST00000377047 H7C423 109 aa10.15□□□□□ -0.78
GPC6-201ENST00000377047 MP68P56378 58 aa10.15□□□□□ -0.78
GPC6-201ENST00000377047 IGLC6P0CF74 106 aa10.15□□□□□ -0.78
GPC6-201ENST00000377047 ARHGAP21Q5T5U3 1957 aa10.15□□□□□ -0.78
GPC6-201ENST00000377047 JMJD7-PLA2G4BH0Y9G9 81 aa10.15□□□□□ -0.79
GPC6-201ENST00000377047 IGLV2-8P01709 118 aa10.15□□□□□ -0.79
GPC6-201ENST00000377047 HIGD1BQ9P298 99 aa10.15□□□□□ -0.79
GPC6-201ENST00000377047 LY6G6CO95867 125 aa10.14□□□□□ -0.79
GPC6-201ENST00000377047 PROK1P58294 105 aa10.14□□□□□ -0.79
GPC6-201ENST00000377047 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
GPC6-201ENST00000377047 TRBV6-8A0A0A6YYG3 113 aa10.14□□□□□ -0.79
GPC6-201ENST00000377047 TMEM256-PLSCR3K7ERE1 68 aa10.14□□□□□ -0.79
GPC6-201ENST00000377047 MIAQ16674 131 aa10.14□□□□□ -0.79
GPC6-201ENST00000377047 KRTAP10-9P60411 292 aa10.14□□□□□ -0.79
GPC6-201ENST00000377047 PCNX3Q9H6A9 2034 aa10.13□□□□□ -0.79
GPC6-201ENST00000377047 MUC22E2RYF6 1773 aaPredicted RBP10.13□□□□□ -0.79
GPC6-201ENST00000377047 CSPG4Q6UVK1 2322 aa10.13□□□□□ -0.79
GPC6-201ENST00000377047 TRBV6-4A0A1B0GX49 114 aa10.13□□□□□ -0.79
GPC6-201ENST00000377047 A0A1B0GXF2 115 aa10.13□□□□□ -0.79
GPC6-201ENST00000377047 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
GPC6-201ENST00000377047 OXLD1Q5BKU9 147 aa10.12□□□□□ -0.79
GPC6-201ENST00000377047 Q8N6K4 173 aa10.12□□□□□ -0.79
GPC6-201ENST00000377047 ZNF295-AS1Q8N0V1 137 aa10.12□□□□□ -0.79
GPC6-201ENST00000377047 WFDC9Q8NEX5 89 aa10.12□□□□□ -0.79
GPC6-201ENST00000377047 IGKV2D-26A0A0A0MRZ7 120 aa10.11□□□□□ -0.79
GPC6-201ENST00000377047 A0A0J9YXY3 114 aa10.11□□□□□ -0.79
GPC6-201ENST00000377047 KPRPQ5T749 579 aaPredicted RBP10.11□□□□□ -0.79
GPC6-201ENST00000377047 CDKN2A-AS1Q9UH64 79 aa10.11□□□□□ -0.79
GPC6-201ENST00000377047 Q8N976 141 aa10.11□□□□□ -0.79
GPC6-201ENST00000377047 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
GPC6-201ENST00000377047 KIAA1549Q9HCM3 1950 aa10.1□□□□□ -0.79
GPC6-201ENST00000377047 MLST8Q9BVC4 326 aa10.1□□□□□ -0.79
GPC6-201ENST00000377047 M0QY20 66 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 AVPP01185 164 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 SPANXCQ9NY87 97 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 TRBV10-2A0A0K0K1G8 114 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 C5orf47Q569G3 176 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 KIR2DL5BQ8NHK3 375 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 IGLV4-3A0A075B6K6 122 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 IGLV1-40P01703 118 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
GPC6-201ENST00000377047 CRIP1P50238 77 aa10.08□□□□□ -0.8
GPC6-201ENST00000377047 NANOS2P60321 138 aaKnown RBP10.08□□□□□ -0.8
GPC6-201ENST00000377047 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
GPC6-201ENST00000377047 CLUHP3Q96NS8 147 aa10.08□□□□□ -0.8
GPC6-201ENST00000377047 LOC100131303A0A0U1RQF7 123 aa10.08□□□□□ -0.8
GPC6-201ENST00000377047 TEN1Q86WV5 123 aa10.07□□□□□ -0.8
GPC6-201ENST00000377047 PRM2P04554 102 aa10.07□□□□□ -0.8
GPC6-201ENST00000377047 TMEM258P61165 79 aa10.07□□□□□ -0.8
GPC6-201ENST00000377047 WFDC2Q14508 124 aa10.07□□□□□ -0.8
GPC6-201ENST00000377047 PRR14LQ5THK1 2151 aa10.06□□□□□ -0.8
GPC6-201ENST00000377047 IGHV4-30-4P0DP06 118 aa10.06□□□□□ -0.8
GPC6-201ENST00000377047 NDUFA7O95182 113 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 409.4 ms