RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PRAC2D3DTV9 90 aa9.43□□□□□ -0.9
NPLOC4-202ENST00000374747 SIRPDQ9H106 197 aa9.43□□□□□ -0.9
NPLOC4-202ENST00000374747 CENPEQ02224 2701 aa9.43□□□□□ -0.9
NPLOC4-202ENST00000374747 CSMD1Q96PZ7 3565 aa9.43□□□□□ -0.9
NPLOC4-202ENST00000374747 CCL24O00175 119 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 FRMD6-AS1P0C7T7 363 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 NRGNQ92686 78 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 DEFB136Q30KP8 78 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 IGLV10-54A0A075B6I4 117 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 IGLV2-23P01705 113 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 Q8N1Y9 231 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 Q8N9W7 124 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 SVEP1Q4LDE5 3571 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 CHKB-CPT1BH3BT56 60 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 NDUFB1O75438 58 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 Q9HAA7 133 aa9.42□□□□□ -0.9
NPLOC4-202ENST00000374747 TNRC6AQ8NDV7 1962 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 ATP5G1P05496 136 aa9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 MRPL23Q16540 153 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 PKIGQ9Y2B9 76 aa9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 C2orf70A6NJV1 201 aa9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 SPATA12Q7Z6I5 190 aa9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 YPEL4Q96NS1 127 aa9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 TRBV7-3A0A075B6L6 115 aa9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 C19orf71A6NCJ1 209 aa9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 SLURP1P55000 103 aa9.41□□□□□ -0.9
NPLOC4-202ENST00000374747 C19orf84I3L1E1 186 aa9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 NDUFA11Q86Y39 141 aa9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 IGHV1-58A0A0C4DH39 117 aa9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 PTH2Q96A98 100 aa9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 DYSFO75923 2080 aa9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 CLPSL1A2RUU4 121 aa9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 TEX22C9J3V5 150 aa9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 PRB2P02812 416 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 ZNF503Q96F45 646 aa9.4□□□□□ -0.9
NPLOC4-202ENST00000374747 LINC00643Q86TS7 51 aa9.4□□□□□ -0.91
NPLOC4-202ENST00000374747 CXCL5P42830 114 aa9.39□□□□□ -0.91
NPLOC4-202ENST00000374747 MRPL36Q9P0J6 103 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-202ENST00000374747 NCR3O14931 201 aa9.39□□□□□ -0.91
NPLOC4-202ENST00000374747 LMO4P61968 165 aa9.39□□□□□ -0.91
NPLOC4-202ENST00000374747 BLCAPP62952 87 aa9.38□□□□□ -0.91
NPLOC4-202ENST00000374747 TMEM256-PLSCR3K7ERE1 68 aa9.38□□□□□ -0.91
NPLOC4-202ENST00000374747 TIRAPP58753 221 aa9.38□□□□□ -0.91
NPLOC4-202ENST00000374747 DSCAMO60469 2012 aa9.38□□□□□ -0.91
NPLOC4-202ENST00000374747 NDUFA1O15239 70 aa9.38□□□□□ -0.91
NPLOC4-202ENST00000374747 A0A1B0GXF2 115 aa9.38□□□□□ -0.91
NPLOC4-202ENST00000374747 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
NPLOC4-202ENST00000374747 HIGD2BQ4VC39 106 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 C20orf203Q8NBC4 194 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 NOTCH2Q04721 2471 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 K7EMT4 169 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 TCL1BO95988 128 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 Q6ZUT4 128 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 LRRC75A-AS1Q8N1F1 130 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 SPART-AS1P0CW21 52 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 LOXL1Q08397 574 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 P0C879 139 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
NPLOC4-202ENST00000374747 IGHV3-30-3P0DP02 117 aa9.36□□□□□ -0.91
NPLOC4-202ENST00000374747 PDE6GP18545 87 aa9.36□□□□□ -0.91
NPLOC4-202ENST00000374747 C14orf132Q9NPU4 83 aa9.36□□□□□ -0.91
NPLOC4-202ENST00000374747 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
NPLOC4-202ENST00000374747 IGHV3-33P01772 117 aa9.36□□□□□ -0.91
NPLOC4-202ENST00000374747 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
NPLOC4-202ENST00000374747 ODF3BA8MYP8 253 aa9.36□□□□□ -0.91
NPLOC4-202ENST00000374747 MIAQ16674 131 aa9.36□□□□□ -0.91
NPLOC4-202ENST00000374747 ZMAT4Q9H898 229 aa9.36□□□□□ -0.91
NPLOC4-202ENST00000374747 PROP1O75360 226 aa9.35□□□□□ -0.91
NPLOC4-202ENST00000374747 RNF183Q96D59 192 aa9.35□□□□□ -0.91
NPLOC4-202ENST00000374747 TANC2Q9HCD6 1990 aa9.35□□□□□ -0.91
NPLOC4-202ENST00000374747 TMEM89A2RUT3 159 aa9.35□□□□□ -0.91
NPLOC4-202ENST00000374747 E7EUB6 86 aa9.35□□□□□ -0.91
NPLOC4-202ENST00000374747 C11orf71Q6IPW1 123 aa9.35□□□□□ -0.91
NPLOC4-202ENST00000374747 C9orf66Q5T8R8 295 aa9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 NACAE9PAV3 2078 aa9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 NDUFV3P56181 108 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 BRWD1-AS2P59051 145 aa9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 NFE4Q86UQ8 179 aa9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 HHLA3Q9XRX5 114 aa9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 IGHV4OR15-8A0A075B7B6 117 aa9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 A0A087WW49 117 aa9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 USP9YO00507 2555 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-202ENST00000374747 BRK1Q8WUW1 75 aa9.33□□□□□ -0.92
NPLOC4-202ENST00000374747 TNFRSF13BO14836 293 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-202ENST00000374747 TRBV12-3P01733 135 aa9.33□□□□□ -0.92
NPLOC4-202ENST00000374747 GPHB5Q86YW7 130 aa9.33□□□□□ -0.92
NPLOC4-202ENST00000374747 ZNF843Q8N446 348 aa9.33□□□□□ -0.92
NPLOC4-202ENST00000374747 MDFICQ9P1T7 246 aa9.33□□□□□ -0.92
NPLOC4-202ENST00000374747 TET2Q6N021 2002 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-202ENST00000374747 IGLV2-8P01709 118 aa9.33□□□□□ -0.92
NPLOC4-202ENST00000374747 A6NDX4 124 aa9.32□□□□□ -0.92
NPLOC4-202ENST00000374747 MT-ATP8P03928 68 aa9.32□□□□□ -0.92
NPLOC4-202ENST00000374747 CCL18P55774 89 aa9.32□□□□□ -0.92
NPLOC4-202ENST00000374747 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
NPLOC4-202ENST00000374747 UQCRQO14949 82 aa9.31□□□□□ -0.92
NPLOC4-202ENST00000374747 EIF4EBP1Q13541 118 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-202ENST00000374747 IGKV1D-37A0A075B6S9 117 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms