RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 IGHV3-23P01764 117 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 C9orf47Q6ZRZ4 202 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 CFAP46Q8IYW2 2715 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 IGLV2-18A0A075B6J9 118 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 CLPSL1A2RUU4 121 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 LMO4P61968 165 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 C15orf32Q32M92 178 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.12□□□□□ -1.43
GARNL3-201ENST00000373386 SPTA1P02549 2419 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 IGSF10Q6WRI0 2623 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 GAS8-AS1O95177 125 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 CCKP06307 115 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 IGFL4Q6B9Z1 124 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 C6orf223Q8N319 242 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 LINC00474Q9P2X8 69 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 ZNF580Q9UK33 172 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 ABCA1O95477 2261 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 LAGE3Q14657 143 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 C5orf56Q8N8D9 126 aa6.11□□□□□ -1.43
GARNL3-201ENST00000373386 LY6HO94772 140 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 PLNP26678 52 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 RBM3P98179 157 aaKnown RBP6.1□□□□□ -1.43
GARNL3-201ENST00000373386 SPATA3Q8NHX4 192 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 NBASA2RRP1 2371 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 COL12A1Q99715 3063 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 RBMY1BA6NDE4 496 aaKnown RBP6.1□□□□□ -1.43
GARNL3-201ENST00000373386 RBMY1EA6NEQ0 496 aaKnown RBP6.1□□□□□ -1.43
GARNL3-201ENST00000373386 VCYO14598 125 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 ATP6V0E1O15342 81 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 RBMY1DP0C7P1 496 aaKnown RBP6.1□□□□□ -1.43
GARNL3-201ENST00000373386 RBMY1A1P0DJD3 496 aaKnown RBP6.1□□□□□ -1.43
GARNL3-201ENST00000373386 RBMY1CP0DJD4 496 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 RBMY1FQ15415 496 aaKnown RBP6.1□□□□□ -1.43
GARNL3-201ENST00000373386 PKDREJQ9NTG1 2253 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 TRAV40A0A0B4J280 105 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 IGKV3D-20A0A0C4DH25 116 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 PRAC2D3DTV9 90 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 MED14OSP0DP75 135 aa6.1□□□□□ -1.43
GARNL3-201ENST00000373386 MRPL35Q9NZE8 188 aaKnown RBP6.1□□□□□ -1.43
GARNL3-201ENST00000373386 LYRM9A8MSI8 78 aa6.09□□□□□ -1.43
GARNL3-201ENST00000373386 NRACQ8N912 160 aa6.09□□□□□ -1.43
GARNL3-201ENST00000373386 PCNX1Q96RV3 2341 aa6.09□□□□□ -1.43
GARNL3-201ENST00000373386 IGHV4-39P01824 125 aa6.09□□□□□ -1.43
GARNL3-201ENST00000373386 TRGV3P03979 118 aa6.09□□□□□ -1.43
GARNL3-201ENST00000373386 COL6A6A6NMZ7 2263 aa6.09□□□□□ -1.44
GARNL3-201ENST00000373386 ROS1P08922 2347 aa6.09□□□□□ -1.44
GARNL3-201ENST00000373386 TRAV12-1A0A0B4J245 112 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 IGHV7-4-1A0A0J9YVY3 117 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 NDUFS5O43920 106 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 SCGB1D4Q6XE38 83 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 ITLN2Q8WWU7 325 aaPredicted RBP6.08□□□□□ -1.44
GARNL3-201ENST00000373386 ZFYVE26Q68DK2 2539 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 EPG5Q9HCE0 2579 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 IGHV3OR16-8A0A075B7F1 116 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 A0A1W2PPR1 153 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 CFC1BP0CG36 223 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 CFC1P0CG37 223 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 USMG5Q96IX5 58 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 H7BZZ5 65 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 NDUFA4O00483 81 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 XCL1P47992 114 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 RHOHQ15669 191 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 SPANXN1Q5VSR9 72 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 C11orf21Q9P2W6 132 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 XCL2Q9UBD3 114 aa6.08□□□□□ -1.44
GARNL3-201ENST00000373386 IGHV3-35A0A0C4DH35 117 aa6.07□□□□□ -1.44
GARNL3-201ENST00000373386 F8VRH5 84 aa6.07□□□□□ -1.44
GARNL3-201ENST00000373386 H7C423 109 aa6.07□□□□□ -1.44
GARNL3-201ENST00000373386 CACNA1BQ00975 2339 aa6.07□□□□□ -1.44
GARNL3-201ENST00000373386 ANKHD1Q8IWZ3 2542 aaKnown RBP6.07□□□□□ -1.44
GARNL3-201ENST00000373386 TRBV27A0A0K0K1C4 114 aa6.07□□□□□ -1.44
GARNL3-201ENST00000373386 SLC25A29Q8N8R3 303 aa6.07□□□□□ -1.44
GARNL3-201ENST00000373386 SMIM2Q9BVW6 85 aa6.07□□□□□ -1.44
GARNL3-201ENST00000373386 S100A7L2Q5SY68 101 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 LYPD5Q6UWN5 251 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 IGHV1-69DA0A0B4J2H0 117 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 M0R378 163 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 IGHV1-69P01742 117 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 Q1RN00 199 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 CLEC19AQ6UXS0 136 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 C20orf197Q8N268 126 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 Q8N2B8 174 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 MPLKIPQ8TAP9 179 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 VSIG2Q96IQ7 327 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 BPESC1Q9GZL8 116 aa6.06□□□□□ -1.44
GARNL3-201ENST00000373386 SOCS3O14543 225 aa6.05□□□□□ -1.44
GARNL3-201ENST00000373386 IGHV3-33P01772 117 aa6.05□□□□□ -1.44
GARNL3-201ENST00000373386 TIMM17AQ99595 171 aa6.05□□□□□ -1.44
GARNL3-201ENST00000373386 IGHV3-66A0A0C4DH42 116 aa6.05□□□□□ -1.44
GARNL3-201ENST00000373386 UBE2L6O14933 153 aa6.05□□□□□ -1.44
GARNL3-201ENST00000373386 TOMM6Q96B49 74 aa6.05□□□□□ -1.44
GARNL3-201ENST00000373386 M0R381 172 aa6.05□□□□□ -1.44
GARNL3-201ENST00000373386 ZNF73O43830 326 aaPredicted RBP6.05□□□□□ -1.44
GARNL3-201ENST00000373386 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.05□□□□□ -1.44
GARNL3-201ENST00000373386 SCGB3A1Q96QR1 104 aa6.05□□□□□ -1.44
GARNL3-201ENST00000373386 TRBV30A0A0K0K1B3 111 aa6.04□□□□□ -1.44
GARNL3-201ENST00000373386 ZNF815PA8K554 130 aa6.04□□□□□ -1.44
GARNL3-201ENST00000373386 F6UB75 175 aa6.04□□□□□ -1.44
GARNL3-201ENST00000373386 TMEM256-PLSCR3K7ERE1 68 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms