RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 LST1O00453 97 aa12.79□□□□□ -0.36
CHUK-201ENST00000370397 TMEM61Q8N0U2 210 aa12.79□□□□□ -0.36
CHUK-201ENST00000370397 SPTA1P02549 2419 aa12.78□□□□□ -0.36
CHUK-201ENST00000370397 SPINK13Q1W4C9 94 aa12.78□□□□□ -0.36
CHUK-201ENST00000370397 COL6A6A6NMZ7 2263 aa12.78□□□□□ -0.36
CHUK-201ENST00000370397 FAM240AA0A1B0GVK7 77 aa12.77□□□□□ -0.36
CHUK-201ENST00000370397 H3BT86 120 aa12.77□□□□□ -0.36
CHUK-201ENST00000370397 IFITM1P13164 125 aa12.77□□□□□ -0.36
CHUK-201ENST00000370397 C15orf53Q8NAA6 179 aa12.77□□□□□ -0.36
CHUK-201ENST00000370397 TRAV8-4A0A0B4J246 113 aa12.77□□□□□ -0.36
CHUK-201ENST00000370397 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.36
CHUK-201ENST00000370397 TINCRA0A1B0GVN0 87 aa12.77□□□□□ -0.36
CHUK-201ENST00000370397 CLEC2BQ92478 149 aa12.77□□□□□ -0.36
CHUK-201ENST00000370397 BEX4Q9NWD9 120 aaPredicted RBP12.77□□□□□ -0.36
CHUK-201ENST00000370397 UBE2D4Q9Y2X8 147 aa12.77□□□□□ -0.36
CHUK-201ENST00000370397 LY6DQ14210 128 aa12.77□□□□□ -0.37
CHUK-201ENST00000370397 Q6ZSN1 163 aa12.77□□□□□ -0.37
CHUK-201ENST00000370397 AKAP6Q13023 2319 aa12.77□□□□□ -0.37
CHUK-201ENST00000370397 TMEM95Q3KNT9 176 aa12.76□□□□□ -0.37
CHUK-201ENST00000370397 C10orf99Q6UWK7 81 aa12.76□□□□□ -0.37
CHUK-201ENST00000370397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.76□□□□□ -0.37
CHUK-201ENST00000370397 CITED2Q99967 270 aaPredicted RBP12.76□□□□□ -0.37
CHUK-201ENST00000370397 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
CHUK-201ENST00000370397 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
CHUK-201ENST00000370397 NDUFA12Q9UI09 145 aa12.76□□□□□ -0.37
CHUK-201ENST00000370397 C19orf84I3L1E1 186 aa12.75□□□□□ -0.37
CHUK-201ENST00000370397 Q1RN00 199 aa12.75□□□□□ -0.37
CHUK-201ENST00000370397 CD28P10747 220 aa12.75□□□□□ -0.37
CHUK-201ENST00000370397 MRPL23Q16540 153 aaKnown RBP12.75□□□□□ -0.37
CHUK-201ENST00000370397 C2orf82Q6UX34 121 aa12.75□□□□□ -0.37
CHUK-201ENST00000370397 PKD1L2Q7Z442 2459 aa12.75□□□□□ -0.37
CHUK-201ENST00000370397 GAGE12JA6NER3 117 aa12.74□□□□□ -0.37
CHUK-201ENST00000370397 GAGE7O76087 117 aa12.74□□□□□ -0.37
CHUK-201ENST00000370397 GAGE12FP0CL80 117 aa12.74□□□□□ -0.37
CHUK-201ENST00000370397 GAGE12GP0CL81 117 aa12.74□□□□□ -0.37
CHUK-201ENST00000370397 GAGE12IP0CL82 117 aa12.74□□□□□ -0.37
CHUK-201ENST00000370397 GAGE4Q13068 117 aa12.74□□□□□ -0.37
CHUK-201ENST00000370397 IGLV5-45A0A087WSX0 123 aa12.74□□□□□ -0.37
CHUK-201ENST00000370397 A8MTW9 85 aa12.74□□□□□ -0.37
CHUK-201ENST00000370397 TIMM17BO60830 172 aa12.74□□□□□ -0.37
CHUK-201ENST00000370397 TRBV7-7A0A0K0K1E9 115 aa12.73□□□□□ -0.37
CHUK-201ENST00000370397 C22orf24Q9Y442 160 aa12.72□□□□□ -0.37
CHUK-201ENST00000370397 AVPP01185 164 aa12.71□□□□□ -0.37
CHUK-201ENST00000370397 TTC32Q5I0X7 151 aa12.71□□□□□ -0.37
CHUK-201ENST00000370397 SDIM1Q6ZPB5 146 aa12.71□□□□□ -0.37
CHUK-201ENST00000370397 PRM2P04554 102 aa12.71□□□□□ -0.38
CHUK-201ENST00000370397 BEAN1Q3B7T3 259 aa12.7□□□□□ -0.38
CHUK-201ENST00000370397 DUX3Q96PT4 197 aa12.7□□□□□ -0.38
CHUK-201ENST00000370397 MXRA5Q9NR99 2828 aa12.7□□□□□ -0.38
CHUK-201ENST00000370397 IGHV3-73A0A0B4J1V6 119 aa12.7□□□□□ -0.38
CHUK-201ENST00000370397 NPC2P61916 151 aa12.7□□□□□ -0.38
CHUK-201ENST00000370397 USP24Q9UPU5 2620 aa12.7□□□□□ -0.38
CHUK-201ENST00000370397 RBMY1BA6NDE4 496 aaKnown RBP12.7□□□□□ -0.38
CHUK-201ENST00000370397 RBMY1EA6NEQ0 496 aaKnown RBP12.7□□□□□ -0.38
CHUK-201ENST00000370397 RBMY1DP0C7P1 496 aaKnown RBP12.7□□□□□ -0.38
CHUK-201ENST00000370397 SNRPD3P62318 126 aaKnown RBP12.7□□□□□ -0.38
CHUK-201ENST00000370397 PRSS2P07478 247 aa12.69□□□□□ -0.38
CHUK-201ENST00000370397 LINC00467Q9BRT7 94 aa12.69□□□□□ -0.38
CHUK-201ENST00000370397 SORL1Q92673 2214 aa12.69□□□□□ -0.38
CHUK-201ENST00000370397 SPANXA1Q9NS26 97 aa12.69□□□□□ -0.38
CHUK-201ENST00000370397 TRGV11A0A075B6L2 103 aa12.69□□□□□ -0.38
CHUK-201ENST00000370397 NDUFA1O15239 70 aa12.69□□□□□ -0.38
CHUK-201ENST00000370397 DAND5Q8N907 189 aa12.68□□□□□ -0.38
CHUK-201ENST00000370397 CUBNO60494 3623 aa12.68□□□□□ -0.38
CHUK-201ENST00000370397 C10orf105Q8TEF2 133 aa12.68□□□□□ -0.38
CHUK-201ENST00000370397 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
CHUK-201ENST00000370397 SMCR5Q8TEV8 140 aa12.67□□□□□ -0.38
CHUK-201ENST00000370397 TMEM101Q96IK0 257 aa12.67□□□□□ -0.38
CHUK-201ENST00000370397 IGLV5-39A0A0G2JS06 123 aa12.67□□□□□ -0.38
CHUK-201ENST00000370397 PIK3CD-AS1Q5SR53 167 aa12.67□□□□□ -0.38
CHUK-201ENST00000370397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.67□□□□□ -0.38
CHUK-201ENST00000370397 IGKV2-29A2NJV5 120 aaPredicted RBP12.67□□□□□ -0.38
CHUK-201ENST00000370397 COX6A2Q02221 97 aa12.67□□□□□ -0.38
CHUK-201ENST00000370397 ACACBO00763 2458 aa12.67□□□□□ -0.38
CHUK-201ENST00000370397 ZANQ9Y493 2812 aa12.66□□□□□ -0.38
CHUK-201ENST00000370397 SHISA2Q6UWI4 295 aa12.66□□□□□ -0.38
CHUK-201ENST00000370397 SOSTDC1Q6X4U4 206 aa12.66□□□□□ -0.38
CHUK-201ENST00000370397 C11orf72Q8NBR9 251 aa12.66□□□□□ -0.38
CHUK-201ENST00000370397 FAM110AQ9BQ89 295 aa12.66□□□□□ -0.38
CHUK-201ENST00000370397 FAM19A3Q7Z5A8 133 aa12.65□□□□□ -0.38
CHUK-201ENST00000370397 TIRAPP58753 221 aa12.65□□□□□ -0.38
CHUK-201ENST00000370397 Q8N2B8 174 aa12.65□□□□□ -0.38
CHUK-201ENST00000370397 LINC01587Q99440 93 aa12.64□□□□□ -0.39
CHUK-201ENST00000370397 LINC00308Q8TCZ7 52 aa12.63□□□□□ -0.39
CHUK-201ENST00000370397 YAE1D1Q9NRH1 226 aa12.63□□□□□ -0.39
CHUK-201ENST00000370397 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
CHUK-201ENST00000370397 TMEM89A2RUT3 159 aa12.63□□□□□ -0.39
CHUK-201ENST00000370397 KNCNA6PVL3 124 aa12.63□□□□□ -0.39
CHUK-201ENST00000370397 COX6CP09669 75 aa12.63□□□□□ -0.39
CHUK-201ENST00000370397 SYNJ2BPP57105 145 aa12.63□□□□□ -0.39
CHUK-201ENST00000370397 CHCHD5Q9BSY4 110 aa12.63□□□□□ -0.39
CHUK-201ENST00000370397 IGHV4-30-2A0A087WSY4 118 aa12.62□□□□□ -0.39
CHUK-201ENST00000370397 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
CHUK-201ENST00000370397 PIMREGQ9BSJ6 248 aa12.62□□□□□ -0.39
CHUK-201ENST00000370397 ZNF469Q96JG9 3925 aaPredicted RBP12.61□□□□□ -0.39
CHUK-201ENST00000370397 IGSF10Q6WRI0 2623 aa12.61□□□□□ -0.39
CHUK-201ENST00000370397 IGHV3-53P01767 116 aa12.61□□□□□ -0.39
CHUK-201ENST00000370397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.61□□□□□ -0.391e-7■■■■■ 31.6
CHUK-201ENST00000370397 UTP20O75691 2785 aaKnown RBP12.61□□□□□ -0.39
CHUK-201ENST00000370397 IGHV4-59P01825 116 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms