RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 PYGO1Q9Y3Y4 419 aa5.66□□□□□ -1.5
MUC1-209ENST00000368396 TEP1Q99973 2627 aaKnown RBP5.65□□□□□ -1.5
MUC1-209ENST00000368396 VWFP04275 2813 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 IGLV4-69A0A075B6H9 119 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 A0A1B0GV90 55 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 K7EQD1 137 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 NMUP48645 174 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 HINT1P49773 126 aaPredicted RBP5.65□□□□□ -1.5
MUC1-209ENST00000368396 CRYBA4P53673 196 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 BATFQ16520 125 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 KRTAP24-1Q3LI83 254 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 PAPPA-AS1Q5QFB9 102 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 PCP2Q8IVA1 136 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 LINC00612Q8N6U2 182 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 KIR2DL5BQ8NHK3 375 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 CHCHD7Q9BUK0 85 aa5.65□□□□□ -1.5
MUC1-209ENST00000368396 IGLV4-3A0A075B6K6 122 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 TRBV7-3A0A075B6L6 115 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 GAGE12BA1L429 117 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 GAGE7O76087 117 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 GAGE12FP0CL80 117 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 GAGE12GP0CL81 117 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 GAGE12IP0CL82 117 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 TCTAP57738 103 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 COTL1Q14019 142 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 BVES-AS1Q5T3Y7 98 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 C12orf54Q6X4T0 127 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 LURAP1LQ8IV03 231 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 ZNRF2Q8NHG8 242 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 HIGD1BQ9P298 99 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 X6R8D5 127 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 ATRQ13535 2644 aa5.64□□□□□ -1.51
MUC1-209ENST00000368396 TRGV2A0A075B6R0 118 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 TRBV6-4A0A1B0GX49 114 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 C11orf86A6NJI1 115 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 E9PLD3 99 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 APOC4P55056 127 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 UBE2D3P61077 147 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 UBE2D2P62837 147 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 RPL36AP83881 106 aaKnown RBP5.63□□□□□ -1.51
MUC1-209ENST00000368396 MPV17L2Q567V2 206 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 TMEM97Q5BJF2 176 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 DAZ4Q86SG3 579 aaKnown RBP5.63□□□□□ -1.51
MUC1-209ENST00000368396 NFE4Q86UQ8 179 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 SLC25A29Q8N8R3 303 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 PHLDA1Q8WV24 401 aaPredicted RBP5.63□□□□□ -1.51
MUC1-209ENST00000368396 RPL36ALQ969Q0 106 aaKnown RBP5.63□□□□□ -1.51
MUC1-209ENST00000368396 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 AMELXQ99217 191 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 OPRPNQ99935 248 aaPredicted RBP5.63□□□□□ -1.51
MUC1-209ENST00000368396 DAZ3Q9NR90 486 aaKnown RBP5.63□□□□□ -1.51
MUC1-209ENST00000368396 SPANXA1Q9NS26 97 aa5.63□□□□□ -1.51
MUC1-209ENST00000368396 IGHV3-38A0A0C4DH36 116 aa5.62□□□□□ -1.51
MUC1-209ENST00000368396 HSD52Q0P140 79 aa5.62□□□□□ -1.51
MUC1-209ENST00000368396 FHL2Q14192 279 aa5.62□□□□□ -1.51
MUC1-209ENST00000368396 MAPKAPK5-AS1Q8N8E1 139 aa5.62□□□□□ -1.51
MUC1-209ENST00000368396 TIMM21Q9BVV7 248 aa5.62□□□□□ -1.51
MUC1-209ENST00000368396 VCX2Q9H322 139 aa5.62□□□□□ -1.51
MUC1-209ENST00000368396 UBE2D4Q9Y2X8 147 aa5.62□□□□□ -1.51
MUC1-209ENST00000368396 DNAH3Q8TD57 4116 aa5.62□□□□□ -1.51
MUC1-209ENST00000368396 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.61□□□□□ -1.51
MUC1-209ENST00000368396 TRGV4A0A0C4DH28 118 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 IGKV2-29A2NJV5 120 aaPredicted RBP5.61□□□□□ -1.51
MUC1-209ENST00000368396 GAGE12JA6NER3 117 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 CYSRT1A8MQ03 144 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 LINC00694P0DN24 101 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 HERVK_113P61574 105 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 MRPS36P82909 103 aaKnown RBP5.61□□□□□ -1.51
MUC1-209ENST00000368396 GAGE1Q13065 139 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 GAGE4Q13068 117 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 GAGE5Q13069 117 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 GAGE13Q4V321 117 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 SHISA2Q6UWI4 295 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 OR11H2Q8NH07 326 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 PRADC1Q9BSG0 188 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 GTSF1LQ9H1H1 148 aa5.61□□□□□ -1.51
MUC1-209ENST00000368396 TRRAPQ9Y4A5 3859 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 TRBV25-1A0A075B6N4 114 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 TRAV8-6A0A0B4J262 113 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 MYMXA0A1B0GTQ4 84 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 LYRM9A8MSI8 78 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 EMP1P54849 157 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 SEC11AP67812 179 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 NTM-AS1Q6ZSK4 140 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 SBSPONQ8IVN8 264 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 CHAC1Q9BUX1 264 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 ZMAT5Q9UDW3 170 aaKnown RBP5.6□□□□□ -1.51
MUC1-209ENST00000368396 NOTCH3Q9UM47 2321 aa5.6□□□□□ -1.51
MUC1-209ENST00000368396 A0A0J9YXV3 536 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 LOC100131303A0A0U1RQF7 123 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 TMEM223A0PJW6 202 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 IGHV4-30-4P0DP06 118 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 ZNF22P17026 224 aaPredicted RBP5.59□□□□□ -1.51
MUC1-209ENST00000368396 SMAGPQ0VAQ4 97 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 DEFB135Q30KP9 77 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 TMEM170BQ5T4T1 132 aa5.59□□□□□ -1.51
MUC1-209ENST00000368396 CEMP1Q6PRD7 247 aaPredicted RBP5.59□□□□□ -1.51
MUC1-209ENST00000368396 Q6ZUT4 128 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms