RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 OR11H2Q8NH07 326 aa17.87■□□□□ 0.45
CLK2-203ENST00000368361 ORAOV1Q8WV07 137 aa17.87■□□□□ 0.45
CLK2-203ENST00000368361 C16orf74Q96GX8 76 aa17.87■□□□□ 0.45
CLK2-203ENST00000368361 CHAC1Q9BUX1 264 aa17.87■□□□□ 0.45
CLK2-203ENST00000368361 IGHV3-38A0A0C4DH36 116 aa17.87■□□□□ 0.45
CLK2-203ENST00000368361 E9PLD3 99 aa17.87■□□□□ 0.45
CLK2-203ENST00000368361 SEC11AP67812 179 aa17.87■□□□□ 0.45
CLK2-203ENST00000368361 PAPPA-AS1Q5QFB9 102 aa17.87■□□□□ 0.45
CLK2-203ENST00000368361 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.86■□□□□ 0.45
CLK2-203ENST00000368361 ZNRF2Q8NHG8 242 aa17.86■□□□□ 0.45
CLK2-203ENST00000368361 PHLDA1Q8WV24 401 aaPredicted RBP17.86■□□□□ 0.45
CLK2-203ENST00000368361 IGLV4-3A0A075B6K6 122 aa17.86■□□□□ 0.45
CLK2-203ENST00000368361 DAZ2Q13117 558 aaKnown RBP17.86■□□□□ 0.45
CLK2-203ENST00000368361 PRADC1Q9BSG0 188 aa17.86■□□□□ 0.45
CLK2-203ENST00000368361 GAGE1Q13065 139 aa17.85■□□□□ 0.45
CLK2-203ENST00000368361 CHCHD7Q9BUK0 85 aa17.84■□□□□ 0.45
CLK2-203ENST00000368361 NPSP0C0P6 89 aa17.84■□□□□ 0.45
CLK2-203ENST00000368361 TRAV4A0A0B4J268 109 aa17.83■□□□□ 0.45
CLK2-203ENST00000368361 RRN3P1Q2M238 152 aa17.83■□□□□ 0.44
CLK2-203ENST00000368361 CEMP1Q6PRD7 247 aaPredicted RBP17.83■□□□□ 0.44
CLK2-203ENST00000368361 PYGO1Q9Y3Y4 419 aa17.83■□□□□ 0.44
CLK2-203ENST00000368361 INSL3P51460 131 aa17.82■□□□□ 0.44
CLK2-203ENST00000368361 FAM104AQ969W3 186 aa17.82■□□□□ 0.44
CLK2-203ENST00000368361 MYMXA0A1B0GTQ4 84 aa17.81■□□□□ 0.44
CLK2-203ENST00000368361 TMEM170BQ5T4T1 132 aa17.81■□□□□ 0.44
CLK2-203ENST00000368361 CITED1Q99966 193 aa17.81■□□□□ 0.44
CLK2-203ENST00000368361 VCX2Q9H322 139 aa17.81■□□□□ 0.44
CLK2-203ENST00000368361 C9orf66Q5T8R8 295 aa17.81■□□□□ 0.44
CLK2-203ENST00000368361 COTL1Q14019 142 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.8■□□□□ 0.44
CLK2-203ENST00000368361 GAGE12BA1L429 117 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 IGKV2-29A2NJV5 120 aaPredicted RBP17.8■□□□□ 0.44
CLK2-203ENST00000368361 A6NDN8 102 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 K7EQD1 137 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 GAGE7O76087 117 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 GAGE12FP0CL80 117 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 GAGE12GP0CL81 117 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 GAGE12IP0CL82 117 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 GCSHP23434 173 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 NFE4Q86UQ8 179 aa17.8■□□□□ 0.44
CLK2-203ENST00000368361 TRBV7-3A0A075B6L6 115 aa17.79■□□□□ 0.44
CLK2-203ENST00000368361 K7EP13 123 aa17.78■□□□□ 0.44
CLK2-203ENST00000368361 HERVK_113P61574 105 aa17.78■□□□□ 0.44
CLK2-203ENST00000368361 SLC25A29Q8N8R3 303 aa17.78■□□□□ 0.44
CLK2-203ENST00000368361 UBE2D4Q9Y2X8 147 aa17.78■□□□□ 0.44
CLK2-203ENST00000368361 FXYD2P54710 66 aa17.77■□□□□ 0.44
CLK2-203ENST00000368361 OVOL2Q9BRP0 275 aa17.77■□□□□ 0.44
CLK2-203ENST00000368361 TRGV2A0A075B6R0 118 aa17.77■□□□□ 0.43
CLK2-203ENST00000368361 AMELXQ99217 191 aa17.77■□□□□ 0.43
CLK2-203ENST00000368361 RNASE13Q5GAN3 156 aaKnown RBP17.76■□□□□ 0.43
CLK2-203ENST00000368361 TRBV10-1A0A0K0K1A3 114 aa17.76■□□□□ 0.43
CLK2-203ENST00000368361 ZNF815PA8K554 130 aa17.76■□□□□ 0.43
CLK2-203ENST00000368361 ATRQ13535 2644 aa17.75■□□□□ 0.43
CLK2-203ENST00000368361 A0A0J9YXV3 536 aa17.75■□□□□ 0.43
CLK2-203ENST00000368361 RPL36AP83881 106 aaKnown RBP17.75■□□□□ 0.43
CLK2-203ENST00000368361 CEND1Q8N111 149 aa17.75■□□□□ 0.43
CLK2-203ENST00000368361 RPL36ALQ969Q0 106 aaKnown RBP17.75■□□□□ 0.43
CLK2-203ENST00000368361 TRRAPQ9Y4A5 3859 aa17.75■□□□□ 0.43
CLK2-203ENST00000368361 SPANXA1Q9NS26 97 aa17.74■□□□□ 0.43
CLK2-203ENST00000368361 TEP1Q99973 2627 aaKnown RBP17.74■□□□□ 0.43
CLK2-203ENST00000368361 TSPEAR-AS2P59090 65 aa17.73■□□□□ 0.43
CLK2-203ENST00000368361 VAMP3Q15836 100 aa17.73■□□□□ 0.43
CLK2-203ENST00000368361 TM2D2Q9BX73 214 aa17.73■□□□□ 0.43
CLK2-203ENST00000368361 H3BRM9 83 aa17.72■□□□□ 0.43
CLK2-203ENST00000368361 ZNF22P17026 224 aaPredicted RBP17.72■□□□□ 0.43
CLK2-203ENST00000368361 CRYBA4P53673 196 aa17.72■□□□□ 0.43
CLK2-203ENST00000368361 GAGE12JA6NER3 117 aa17.72■□□□□ 0.43
CLK2-203ENST00000368361 GAGE4Q13068 117 aa17.72■□□□□ 0.43
CLK2-203ENST00000368361 GAGE5Q13069 117 aa17.72■□□□□ 0.43
CLK2-203ENST00000368361 GAGE13Q4V321 117 aa17.72■□□□□ 0.43
CLK2-203ENST00000368361 PLEKHB2Q96CS7 222 aa17.72■□□□□ 0.43
CLK2-203ENST00000368361 HIST1H4GQ99525 98 aa17.72■□□□□ 0.43
CLK2-203ENST00000368361 TAL2Q16559 108 aa17.71■□□□□ 0.43
CLK2-203ENST00000368361 F8P00451 2351 aa17.71■□□□□ 0.42
CLK2-203ENST00000368361 TMEM223A0PJW6 202 aa17.7■□□□□ 0.42
CLK2-203ENST00000368361 UBE2D3P61077 147 aa17.7■□□□□ 0.42
CLK2-203ENST00000368361 UBE2D2P62837 147 aa17.7■□□□□ 0.42
CLK2-203ENST00000368361 UBE2V1Q13404 147 aa17.7■□□□□ 0.42
CLK2-203ENST00000368361 Q6ZUT4 128 aa17.7■□□□□ 0.42
CLK2-203ENST00000368361 CCL25O15444 150 aa17.7■□□□□ 0.42
CLK2-203ENST00000368361 PTTG1IPP53801 180 aa17.7■□□□□ 0.42
CLK2-203ENST00000368361 RAB37Q96AX2 223 aa17.7■□□□□ 0.42
CLK2-203ENST00000368361 MRPS36P82909 103 aaKnown RBP17.69■□□□□ 0.42
CLK2-203ENST00000368361 SCGB1D4Q6XE38 83 aa17.69■□□□□ 0.42
CLK2-203ENST00000368361 DAZ4Q86SG3 579 aaKnown RBP17.69■□□□□ 0.42
CLK2-203ENST00000368361 DAZ3Q9NR90 486 aaKnown RBP17.69■□□□□ 0.42
CLK2-203ENST00000368361 FLNBO75369 2602 aaKnown RBP17.69■□□□□ 0.42
CLK2-203ENST00000368361 NTM-AS1Q6ZSK4 140 aa17.69■□□□□ 0.42
CLK2-203ENST00000368361 LOC100131303A0A0U1RQF7 123 aa17.67■□□□□ 0.42
CLK2-203ENST00000368361 C9orf118A6NHY6 69 aa17.67■□□□□ 0.42
CLK2-203ENST00000368361 J3QQQ9 107 aa17.67■□□□□ 0.42
CLK2-203ENST00000368361 AMMECR1LQ6DCA0 310 aa17.67■□□□□ 0.42
CLK2-203ENST00000368361 IGHV3-64A0A075B6Q5 118 aa17.66■□□□□ 0.42
CLK2-203ENST00000368361 TRGV4A0A0C4DH28 118 aa17.66■□□□□ 0.42
CLK2-203ENST00000368361 TRBV6-4A0A1B0GX49 114 aa17.66■□□□□ 0.42
CLK2-203ENST00000368361 CIDEAO60543 219 aa17.66■□□□□ 0.42
CLK2-203ENST00000368361 LINC00694P0DN24 101 aa17.66■□□□□ 0.42
CLK2-203ENST00000368361 NAA38Q9BRA0 125 aaKnown RBP17.66■□□□□ 0.42
CLK2-203ENST00000368361 NHP2Q9NX24 153 aaKnown RBP17.66■□□□□ 0.42
CLK2-203ENST00000368361 X6R8D5 127 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms