RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 Q6ZPA2 131 aa8.01□□□□□ -1.13
PTPRK-205ENST00000368213 UBL5Q9BZL1 73 aa8□□□□□ -1.13
PTPRK-205ENST00000368213 SPTBN4Q9H254 2564 aa8□□□□□ -1.13
PTPRK-205ENST00000368213 PCNX3Q9H6A9 2034 aa8□□□□□ -1.13
PTPRK-205ENST00000368213 ZFAND2AQ8N6M9 145 aa8□□□□□ -1.13
PTPRK-205ENST00000368213 FUSP35637 526 aaKnown RBP eCLIP8□□□□□ -1.133e-6■■■■□ 20.3
PTPRK-205ENST00000368213 OCIAD2Q56VL3 154 aa8□□□□□ -1.13
PTPRK-205ENST00000368213 ZNF80P51504 273 aaPredicted RBP7.99□□□□□ -1.13
PTPRK-205ENST00000368213 LYPD6BQ8NI32 183 aa7.99□□□□□ -1.13
PTPRK-205ENST00000368213 LECT2O14960 151 aa7.99□□□□□ -1.13
PTPRK-205ENST00000368213 CRIP3Q6Q6R5 217 aa7.99□□□□□ -1.13
PTPRK-205ENST00000368213 TRBV6-4A0A1B0GX49 114 aa7.99□□□□□ -1.13
PTPRK-205ENST00000368213 RANBP2P49792 3224 aaKnown RBP7.99□□□□□ -1.13
PTPRK-205ENST00000368213 C20orf203Q8NBC4 194 aa7.99□□□□□ -1.13
PTPRK-205ENST00000368213 CARD19Q96LW7 228 aa7.99□□□□□ -1.13
PTPRK-205ENST00000368213 CEMP1Q6PRD7 247 aaPredicted RBP7.98□□□□□ -1.13
PTPRK-205ENST00000368213 Q6ZUT4 128 aa7.98□□□□□ -1.13
PTPRK-205ENST00000368213 ORMDL1Q9P0S3 153 aa7.98□□□□□ -1.13
PTPRK-205ENST00000368213 EIF4EBP1Q13541 118 aaPredicted RBP7.98□□□□□ -1.13
PTPRK-205ENST00000368213 C21orf62-AS1Q17RA5 79 aa7.98□□□□□ -1.13
PTPRK-205ENST00000368213 CITED1Q99966 193 aa7.98□□□□□ -1.13
PTPRK-205ENST00000368213 TINCRA0A1B0GVN0 87 aa7.98□□□□□ -1.13
PTPRK-205ENST00000368213 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
PTPRK-205ENST00000368213 JMJD1CQ15652 2540 aa7.98□□□□□ -1.13
PTPRK-205ENST00000368213 HIGD2AQ9BW72 106 aa7.98□□□□□ -1.13
PTPRK-205ENST00000368213 TOMM6Q96B49 74 aa7.98□□□□□ -1.13
PTPRK-205ENST00000368213 TRBV20-1A0A075B6N2 111 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 COX8AP10176 69 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 IFITM1P13164 125 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 OPRPNQ99935 248 aaPredicted RBP7.97□□□□□ -1.13
PTPRK-205ENST00000368213 IGHV1-58A0A0C4DH39 117 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 MAJINQ3KP22 176 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 DIRC1Q969H9 104 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 NDUFB1O75438 58 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 TRBV6-8A0A0A6YYG3 113 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 BRI3O95415 125 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 UFSP1Q6NVU6 142 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 CEND1Q8N111 149 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 BAALCQ8WXS3 180 aa7.97□□□□□ -1.13
PTPRK-205ENST00000368213 A0A0C4DFX4 3053 aa7.96□□□□□ -1.13
PTPRK-205ENST00000368213 H7C423 109 aa7.96□□□□□ -1.14
PTPRK-205ENST00000368213 RS1O15537 224 aa7.96□□□□□ -1.14
PTPRK-205ENST00000368213 DAND5Q8N907 189 aa7.96□□□□□ -1.14
PTPRK-205ENST00000368213 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.14
PTPRK-205ENST00000368213 IGLV1-51P01701 117 aa7.96□□□□□ -1.14
PTPRK-205ENST00000368213 UBE2D1P51668 147 aa7.96□□□□□ -1.14
PTPRK-205ENST00000368213 KIAA1549Q9HCM3 1950 aa7.96□□□□□ -1.14
PTPRK-205ENST00000368213 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
PTPRK-205ENST00000368213 NHLRC4P0CG21 123 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-205ENST00000368213 MIAQ16674 131 aa7.95□□□□□ -1.14
PTPRK-205ENST00000368213 FAM19A5Q7Z5A7 132 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-205ENST00000368213 FAM19A1Q7Z5A9 133 aa7.95□□□□□ -1.14
PTPRK-205ENST00000368213 MIR7-3HGQ8N6C7 128 aa7.95□□□□□ -1.14
PTPRK-205ENST00000368213 MKI67P46013 3256 aaKnown RBP7.94□□□□□ -1.14
PTPRK-205ENST00000368213 LINC00467Q9BRT7 94 aa7.94□□□□□ -1.14
PTPRK-205ENST00000368213 SYCNQ0VAF6 134 aa7.94□□□□□ -1.14
PTPRK-205ENST00000368213 LELP1Q5T871 98 aa7.94□□□□□ -1.14
PTPRK-205ENST00000368213 C19orf71A6NCJ1 209 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 PYY3Q5JQD4 70 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 LINC00322Q6ZN03 302 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-205ENST00000368213 ZFYVE26Q68DK2 2539 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 ZNF462Q96JM2 2506 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 CRYBA4P53673 196 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 TMEM258P61165 79 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 G3V4G9 280 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 H0YGX0 51 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 CFC1BP0CG36 223 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 CFC1P0CG37 223 aa7.93□□□□□ -1.14
PTPRK-205ENST00000368213 Q8N976 141 aa7.92□□□□□ -1.14
PTPRK-205ENST00000368213 ODF3L2Q3SX64 289 aa7.92□□□□□ -1.14
PTPRK-205ENST00000368213 MUSTN1Q8IVN3 82 aa7.92□□□□□ -1.14
PTPRK-205ENST00000368213 ANKRD11Q6UB99 2663 aaPredicted RBP7.92□□□□□ -1.14
PTPRK-205ENST00000368213 Q6ZVH6 145 aa7.92□□□□□ -1.14
PTPRK-205ENST00000368213 PROK1P58294 105 aa7.92□□□□□ -1.14
PTPRK-205ENST00000368213 DCANP1Q8TF63 244 aa7.92□□□□□ -1.14
PTPRK-205ENST00000368213 C11orf1Q9H5F2 150 aa7.91□□□□□ -1.14
PTPRK-205ENST00000368213 ARHGAP32A7KAX9 2087 aa7.91□□□□□ -1.14
PTPRK-205ENST00000368213 C10orf91Q5T1B1 145 aa7.91□□□□□ -1.14
PTPRK-205ENST00000368213 BAALC-AS2P0C853 105 aa7.91□□□□□ -1.14
PTPRK-205ENST00000368213 TRACP01848 142 aa7.91□□□□□ -1.14
PTPRK-205ENST00000368213 IGLC3P0DOY3 106 aa7.91□□□□□ -1.14
PTPRK-205ENST00000368213 LINC01545Q5VT33 79 aa7.91□□□□□ -1.14
PTPRK-205ENST00000368213 LOC100131303A0A0U1RQF7 123 aa7.91□□□□□ -1.14
PTPRK-205ENST00000368213 C11orf86A6NJI1 115 aa7.9□□□□□ -1.14
PTPRK-205ENST00000368213 COX7BP24311 80 aa7.9□□□□□ -1.14
PTPRK-205ENST00000368213 MRGPRG-AS1Q2M3A8 158 aa7.9□□□□□ -1.14
PTPRK-205ENST00000368213 C9orf85Q96MD7 179 aa7.9□□□□□ -1.14
PTPRK-205ENST00000368213 A0A096LNI7 61 aa7.9□□□□□ -1.14
PTPRK-205ENST00000368213 K7ERJ3 54 aa7.9□□□□□ -1.14
PTPRK-205ENST00000368213 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
PTPRK-205ENST00000368213 PRM2P04554 102 aa7.9□□□□□ -1.14
PTPRK-205ENST00000368213 RBX1P62877 108 aa7.9□□□□□ -1.14
PTPRK-205ENST00000368213 EDN2P20800 178 aa7.9□□□□□ -1.15
PTPRK-205ENST00000368213 H3BQ85 93 aa7.9□□□□□ -1.15
PTPRK-205ENST00000368213 RAI1Q7Z5J4 1906 aaPredicted RBP7.89□□□□□ -1.15
PTPRK-205ENST00000368213 SPANXDQ9BXN6 97 aa7.89□□□□□ -1.15
PTPRK-205ENST00000368213 IGLC6P0CF74 106 aa7.89□□□□□ -1.15
PTPRK-205ENST00000368213 ADAMTS20P59510 1910 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms