RNA–Protein interactions for RNA: ENST00000367538.1

SMG7-203, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG7, Length 328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-203ENST00000367538 GTSF1Q8WW33 167 aa11.65□□□□□ -0.54
SMG7-203ENST00000367538 TPPP3Q9BW30 176 aa11.65□□□□□ -0.54
SMG7-203ENST00000367538 PKIGQ9Y2B9 76 aa11.65□□□□□ -0.54
SMG7-203ENST00000367538 A0A0J9YXV3 536 aa11.64□□□□□ -0.55
SMG7-203ENST00000367538 XKRY2A2RUG3 117 aa11.64□□□□□ -0.55
SMG7-203ENST00000367538 AMTP48728 403 aa11.64□□□□□ -0.55
SMG7-203ENST00000367538 MAJINQ3KP22 176 aa11.64□□□□□ -0.55
SMG7-203ENST00000367538 LINC00474Q9P2X8 69 aa11.64□□□□□ -0.55
SMG7-203ENST00000367538 GAGE12HA6NDE8 117 aa11.63□□□□□ -0.55
SMG7-203ENST00000367538 REG3GQ6UW15 175 aa11.63□□□□□ -0.55
SMG7-203ENST00000367538 OR2D3Q8NGH3 330 aa11.63□□□□□ -0.55
SMG7-203ENST00000367538 C11orf52Q96A22 123 aa11.63□□□□□ -0.55
SMG7-203ENST00000367538 SMIM12Q96EX1 92 aa11.63□□□□□ -0.55
SMG7-203ENST00000367538 ZNF345Q14585 488 aa11.62□□□□□ -0.55
SMG7-203ENST00000367538 SPINK6Q6UWN8 80 aa11.62□□□□□ -0.55
SMG7-203ENST00000367538 STPG4Q8N801 248 aa11.62□□□□□ -0.55
SMG7-203ENST00000367538 PRSS3P2Q8NHM4 247 aa11.62□□□□□ -0.55
SMG7-203ENST00000367538 GVQW2A0A096LPI5 108 aaPredicted RBP11.61□□□□□ -0.55
SMG7-203ENST00000367538 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
SMG7-203ENST00000367538 A0A1B0GV50 99 aa11.61□□□□□ -0.55
SMG7-203ENST00000367538 H2AFB1P0C5Y9 115 aa11.61□□□□□ -0.55
SMG7-203ENST00000367538 MANBALQ9NQG1 85 aa11.61□□□□□ -0.55
SMG7-203ENST00000367538 C19orf71A6NCJ1 209 aa11.6□□□□□ -0.55
SMG7-203ENST00000367538 HIGD2BQ4VC39 106 aa11.6□□□□□ -0.55
SMG7-203ENST00000367538 CENPWQ5EE01 88 aa11.6□□□□□ -0.55
SMG7-203ENST00000367538 KRTAP10-8P60410 259 aa11.59□□□□□ -0.55
SMG7-203ENST00000367538 CHCHD10Q8WYQ3 142 aaPredicted RBP11.59□□□□□ -0.55
SMG7-203ENST00000367538 H7C423 109 aa11.58□□□□□ -0.56
SMG7-203ENST00000367538 NCR2O95944 276 aa11.58□□□□□ -0.56
SMG7-203ENST00000367538 AMMECR1LQ6DCA0 310 aa11.58□□□□□ -0.56
SMG7-203ENST00000367538 BIN3Q9NQY0 253 aa11.58□□□□□ -0.56
SMG7-203ENST00000367538 IGKV3OR2-268A0A0C4DH90 116 aa11.57□□□□□ -0.56
SMG7-203ENST00000367538 IFNA1P01562 189 aa11.57□□□□□ -0.56
SMG7-203ENST00000367538 NTF3P20783 257 aa11.57□□□□□ -0.56
SMG7-203ENST00000367538 LYZL1Q6UWQ5 148 aa11.57□□□□□ -0.56
SMG7-203ENST00000367538 A0A096LNI7 61 aa11.56□□□□□ -0.56
SMG7-203ENST00000367538 GNG4P50150 75 aa11.56□□□□□ -0.56
SMG7-203ENST00000367538 EIF5AP63241 154 aaKnown RBP11.56□□□□□ -0.56
SMG7-203ENST00000367538 CCL20P78556 96 aa11.56□□□□□ -0.56
SMG7-203ENST00000367538 C9orf62Q8N4C0 152 aa11.56□□□□□ -0.56
SMG7-203ENST00000367538 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
SMG7-203ENST00000367538 CTRLP40313 264 aa11.55□□□□□ -0.56
SMG7-203ENST00000367538 CNFNQ9BYD5 112 aa11.55□□□□□ -0.56
SMG7-203ENST00000367538 GNG13Q9P2W3 67 aa11.55□□□□□ -0.56
SMG7-203ENST00000367538 TRAV1-1A0A0B4J248 108 aa11.54□□□□□ -0.56
SMG7-203ENST00000367538 ZNF25P17030 456 aaPredicted RBP11.54□□□□□ -0.56
SMG7-203ENST00000367538 FOXI1Q12951 378 aa11.54□□□□□ -0.56
SMG7-203ENST00000367538 Q6ZRP5 223 aa11.54□□□□□ -0.56
SMG7-203ENST00000367538 KANTRA0A1W2PQU2 76 aa11.53□□□□□ -0.56
SMG7-203ENST00000367538 BCL2L11O43521 198 aa11.53□□□□□ -0.56
SMG7-203ENST00000367538 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMG7-203ENST00000367538 RNASEKQ6P5S7 137 aaKnown RBP11.53□□□□□ -0.56
SMG7-203ENST00000367538 GATD1Q8NB37 220 aa11.53□□□□□ -0.56
SMG7-203ENST00000367538 BATF3Q9NR55 127 aa11.53□□□□□ -0.56
SMG7-203ENST00000367538 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.57
SMG7-203ENST00000367538 HMSDA8MTL9 139 aa11.52□□□□□ -0.57
SMG7-203ENST00000367538 TEX46H3BTG2 121 aa11.52□□□□□ -0.57
SMG7-203ENST00000367538 PDE6DO43924 150 aa11.52□□□□□ -0.57
SMG7-203ENST00000367538 APCSP02743 223 aa11.52□□□□□ -0.57
SMG7-203ENST00000367538 TEX261Q6UWH6 196 aa11.52□□□□□ -0.57
SMG7-203ENST00000367538 Q6ZNX1 250 aa11.52□□□□□ -0.57
SMG7-203ENST00000367538 OR5A1Q8NGJ0 315 aa11.52□□□□□ -0.57
SMG7-203ENST00000367538 FGF6P10767 208 aa11.51□□□□□ -0.57
SMG7-203ENST00000367538 ODF1Q14990 250 aa11.51□□□□□ -0.57
SMG7-203ENST00000367538 TWIST1Q15672 202 aa11.51□□□□□ -0.57
SMG7-203ENST00000367538 CARD19Q96LW7 228 aa11.51□□□□□ -0.57
SMG7-203ENST00000367538 RAB19A4D1S5 217 aa11.5□□□□□ -0.57
SMG7-203ENST00000367538 MEF2BQ02080 365 aaPredicted RBP11.5□□□□□ -0.57
SMG7-203ENST00000367538 FAM210AQ96ND0 272 aa11.5□□□□□ -0.57
SMG7-203ENST00000367538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.49□□□□□ -0.57
SMG7-203ENST00000367538 IGKV2-29A2NJV5 120 aaPredicted RBP11.49□□□□□ -0.57
SMG7-203ENST00000367538 SMLR1H3BR10 107 aa11.49□□□□□ -0.57
SMG7-203ENST00000367538 SMIM15Q7Z3B0 74 aa11.49□□□□□ -0.57
SMG7-203ENST00000367538 TMEM101Q96IK0 257 aa11.49□□□□□ -0.57
SMG7-203ENST00000367538 BTF3L4Q96K17 158 aa11.49□□□□□ -0.57
SMG7-203ENST00000367538 TRBV20OR9-2A0A075B6H5 130 aa11.48□□□□□ -0.57
SMG7-203ENST00000367538 TRAV26-2A0A0B4J265 109 aa11.48□□□□□ -0.57
SMG7-203ENST00000367538 XCL1P47992 114 aa11.48□□□□□ -0.57
SMG7-203ENST00000367538 LINC00959A0A1B0GUT2 108 aa11.47□□□□□ -0.57
SMG7-203ENST00000367538 SDHAF1A6NFY7 115 aa11.47□□□□□ -0.57
SMG7-203ENST00000367538 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
SMG7-203ENST00000367538 NUDT11Q96G61 164 aa11.47□□□□□ -0.57
SMG7-203ENST00000367538 MED9Q9NWA0 146 aa11.47□□□□□ -0.57
SMG7-203ENST00000367538 ZNF561-AS1K7EIQ3 104 aa11.46□□□□□ -0.57
SMG7-203ENST00000367538 CCL25O15444 150 aa11.46□□□□□ -0.57
SMG7-203ENST00000367538 SYCNQ0VAF6 134 aa11.46□□□□□ -0.57
SMG7-203ENST00000367538 RGS21Q2M5E4 152 aa11.46□□□□□ -0.57
SMG7-203ENST00000367538 ISOC2Q96AB3 205 aa11.46□□□□□ -0.57
SMG7-203ENST00000367538 RPL39LQ96EH5 51 aaKnown RBP11.46□□□□□ -0.57
SMG7-203ENST00000367538 RPP21Q9H633 154 aaKnown RBP11.46□□□□□ -0.57
SMG7-203ENST00000367538 I3L3M4 83 aa11.45□□□□□ -0.58
SMG7-203ENST00000367538 GAS8-AS1O95177 125 aa11.45□□□□□ -0.58
SMG7-203ENST00000367538 PTTG1IPP53801 180 aa11.45□□□□□ -0.58
SMG7-203ENST00000367538 EIF5AL1Q6IS14 154 aaKnown RBP11.45□□□□□ -0.58
SMG7-203ENST00000367538 FAM231BA6NCW3 169 aa11.44□□□□□ -0.58
SMG7-203ENST00000367538 SS18Q15532 418 aa11.44□□□□□ -0.58
SMG7-203ENST00000367538 CD164L2Q6UWJ8 174 aa11.44□□□□□ -0.58
SMG7-203ENST00000367538 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
SMG7-203ENST00000367538 LOC107984640A0A0U1RRK4 108 aa11.43□□□□□ -0.58
SMG7-203ENST00000367538 PMCHP20382 165 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms