RNA–Protein interactions for RNA: ENST00000367064.7

CD55-204, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD55, Length 2,760 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-204ENST00000367064 NIPBLQ6KC79 2804 aaeCLIP11.97□□□□□ -0.498e-7■■■□□ 15.3
CD55-204ENST00000367064 NXPH4O95158 308 aa11.96□□□□□ -0.49
CD55-204ENST00000367064 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
CD55-204ENST00000367064 RAX2Q96IS3 184 aa11.96□□□□□ -0.49
CD55-204ENST00000367064 IGHV1OR15-1A0A075B7D0 117 aa11.96□□□□□ -0.49
CD55-204ENST00000367064 F8VRH5 84 aa11.96□□□□□ -0.49
CD55-204ENST00000367064 H7C1H1 209 aa11.96□□□□□ -0.49
CD55-204ENST00000367064 Q8N2B8 174 aa11.96□□□□□ -0.49
CD55-204ENST00000367064 NOTCH3Q9UM47 2321 aa11.96□□□□□ -0.5
CD55-204ENST00000367064 ZNF815PA8K554 130 aa11.96□□□□□ -0.5
CD55-204ENST00000367064 PRM2P04554 102 aa11.96□□□□□ -0.5
CD55-204ENST00000367064 LYRM7Q5U5X0 104 aa11.96□□□□□ -0.5
CD55-204ENST00000367064 C2orf66Q6UXQ4 117 aa11.96□□□□□ -0.5
CD55-204ENST00000367064 ODF3Q96PU9 254 aa11.96□□□□□ -0.5
CD55-204ENST00000367064 PDZD2O15018 2839 aa11.95□□□□□ -0.5
CD55-204ENST00000367064 DUSP14O95147 198 aaKnown RBP11.95□□□□□ -0.5
CD55-204ENST00000367064 TMEM61Q8N0U2 210 aa11.95□□□□□ -0.5
CD55-204ENST00000367064 TOMM6Q96B49 74 aa11.95□□□□□ -0.5
CD55-204ENST00000367064 PRADC1Q9BSG0 188 aa11.95□□□□□ -0.5
CD55-204ENST00000367064 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
CD55-204ENST00000367064 Q6ZSV7 163 aa11.94□□□□□ -0.5
CD55-204ENST00000367064 SCGB1C2P0DMR2 95 aa11.94□□□□□ -0.5
CD55-204ENST00000367064 ZNF56Q15929 161 aa11.94□□□□□ -0.5
CD55-204ENST00000367064 NDUFA11Q86Y39 141 aa11.94□□□□□ -0.5
CD55-204ENST00000367064 C9orf85Q96MD7 179 aa11.94□□□□□ -0.5
CD55-204ENST00000367064 RBMY1A1P0DJD3 496 aaKnown RBP11.93□□□□□ -0.5
CD55-204ENST00000367064 RBMY1CP0DJD4 496 aa11.93□□□□□ -0.5
CD55-204ENST00000367064 RBMY1FQ15415 496 aaKnown RBP11.93□□□□□ -0.5
CD55-204ENST00000367064 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
CD55-204ENST00000367064 DNAJC9-AS1A6NH13 148 aa11.93□□□□□ -0.5
CD55-204ENST00000367064 PPP1R17O96001 155 aa11.92□□□□□ -0.5
CD55-204ENST00000367064 DYNLRB2Q8TF09 96 aa11.92□□□□□ -0.5
CD55-204ENST00000367064 ZNF876PQ49A33 203 aa11.92□□□□□ -0.5
CD55-204ENST00000367064 POM121L12Q8N7R1 296 aa11.92□□□□□ -0.5
CD55-204ENST00000367064 PEMTQ9UBM1 199 aa11.92□□□□□ -0.5
CD55-204ENST00000367064 ZNF256Q9Y2P7 627 aaPredicted RBP11.92□□□□□ -0.5
CD55-204ENST00000367064 SLC25A20O43772 301 aa11.91□□□□□ -0.5
CD55-204ENST00000367064 SDHAF1A6NFY7 115 aa11.91□□□□□ -0.5
CD55-204ENST00000367064 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
CD55-204ENST00000367064 TRAV12-1A0A0B4J245 112 aa11.9□□□□□ -0.5
CD55-204ENST00000367064 C9JAW5 83 aa11.9□□□□□ -0.5
CD55-204ENST00000367064 RPL39P62891 51 aaKnown RBP11.9□□□□□ -0.5
CD55-204ENST00000367064 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
CD55-204ENST00000367064 TP53TG1Q9Y2A0 90 aa11.9□□□□□ -0.5
CD55-204ENST00000367064 IGHV3-73A0A0B4J1V6 119 aa11.9□□□□□ -0.51
CD55-204ENST00000367064 RBMY1BA6NDE4 496 aaKnown RBP11.9□□□□□ -0.51
CD55-204ENST00000367064 RBMY1EA6NEQ0 496 aaKnown RBP11.9□□□□□ -0.51
CD55-204ENST00000367064 CRYGDP07320 174 aa11.9□□□□□ -0.51
CD55-204ENST00000367064 RBMY1DP0C7P1 496 aaKnown RBP11.9□□□□□ -0.51
CD55-204ENST00000367064 POLR2KP53803 58 aaKnown RBP11.9□□□□□ -0.51
CD55-204ENST00000367064 MEIG1Q5JSS6 88 aa11.9□□□□□ -0.51
CD55-204ENST00000367064 NEXN-AS1Q8NBZ9 246 aa11.9□□□□□ -0.51
CD55-204ENST00000367064 JMJD1CQ15652 2540 aa11.89□□□□□ -0.51
CD55-204ENST00000367064 H3BMM0 161 aa11.89□□□□□ -0.51
CD55-204ENST00000367064 CFC1BP0CG36 223 aa11.89□□□□□ -0.51
CD55-204ENST00000367064 CFC1P0CG37 223 aa11.89□□□□□ -0.51
CD55-204ENST00000367064 C3orf56Q8N813 242 aa11.89□□□□□ -0.51
CD55-204ENST00000367064 EMP1P54849 157 aa11.88□□□□□ -0.51
CD55-204ENST00000367064 TRPT1Q86TN4 253 aaKnown RBP11.88□□□□□ -0.51
CD55-204ENST00000367064 VCYO14598 125 aa11.88□□□□□ -0.51
CD55-204ENST00000367064 UNC79Q9P2D8 2635 aa11.88□□□□□ -0.51
CD55-204ENST00000367064 C10orf126Q8N4M7 172 aa11.87□□□□□ -0.51
CD55-204ENST00000367064 TMEM86BQ8N661 226 aa11.87□□□□□ -0.51
CD55-204ENST00000367064 NTN5Q8WTR8 489 aaPredicted RBP11.87□□□□□ -0.51
CD55-204ENST00000367064 PPDPFQ9H3Y8 114 aa11.87□□□□□ -0.51
CD55-204ENST00000367064 MAP6D1Q9H9H5 199 aa11.87□□□□□ -0.51
CD55-204ENST00000367064 YAE1D1Q9NRH1 226 aa11.87□□□□□ -0.51
CD55-204ENST00000367064 FASNP49327 2511 aaKnown RBP11.87□□□□□ -0.51
CD55-204ENST00000367064 TRGV11A0A075B6L2 103 aa11.87□□□□□ -0.51
CD55-204ENST00000367064 M0QY20 66 aa11.87□□□□□ -0.51
CD55-204ENST00000367064 KRTAP1-1Q07627 177 aa11.87□□□□□ -0.51
CD55-204ENST00000367064 DEFB114Q30KQ6 69 aa11.87□□□□□ -0.51
CD55-204ENST00000367064 Q6Q795 121 aa11.86□□□□□ -0.51
CD55-204ENST00000367064 C15orf53Q8NAA6 179 aa11.86□□□□□ -0.51
CD55-204ENST00000367064 CD28P10747 220 aa11.86□□□□□ -0.51
CD55-204ENST00000367064 NACAE9PAV3 2078 aa11.85□□□□□ -0.51
CD55-204ENST00000367064 TSHBP01222 138 aa11.85□□□□□ -0.51
CD55-204ENST00000367064 A0A0J9YY99 117 aa11.85□□□□□ -0.51
CD55-204ENST00000367064 PROK1P58294 105 aa11.85□□□□□ -0.51
CD55-204ENST00000367064 PRO1854Q9UHT4 67 aa11.84□□□□□ -0.51
CD55-204ENST00000367064 NOTCH2Q04721 2471 aa11.84□□□□□ -0.51
CD55-204ENST00000367064 P0DMU3 169 aa11.84□□□□□ -0.51
CD55-204ENST00000367064 FAM231AP0DMU4 169 aa11.84□□□□□ -0.51
CD55-204ENST00000367064 FAM231CP0DMU5 169 aa11.84□□□□□ -0.51
CD55-204ENST00000367064 ANK3Q12955 4377 aaKnown RBP11.84□□□□□ -0.51
CD55-204ENST00000367064 TRBV27A0A0K0K1C4 114 aa11.84□□□□□ -0.51
CD55-204ENST00000367064 SETXQ7Z333 2677 aaKnown RBP11.83□□□□□ -0.51
CD55-204ENST00000367064 LINC01587Q99440 93 aa11.83□□□□□ -0.52
CD55-204ENST00000367064 HECTD1Q9ULT8 2610 aa11.83□□□□□ -0.52
CD55-204ENST00000367064 TRAV8-4A0A0B4J246 113 aa11.83□□□□□ -0.52
CD55-204ENST00000367064 TEX49A0A1B0GTD5 131 aa11.83□□□□□ -0.52
CD55-204ENST00000367064 IGIPA6NJ69 53 aa11.83□□□□□ -0.52
CD55-204ENST00000367064 H7C2G1 150 aa11.83□□□□□ -0.52
CD55-204ENST00000367064 IGHV3-30P01768 117 aa11.83□□□□□ -0.52
CD55-204ENST00000367064 IGHV3-30-5P0DP03 117 aa11.83□□□□□ -0.52
CD55-204ENST00000367064 CITED2Q99967 270 aaPredicted RBP11.83□□□□□ -0.52
CD55-204ENST00000367064 OPRPNQ99935 248 aaPredicted RBP11.82□□□□□ -0.52
CD55-204ENST00000367064 TRBV6-5A0A0K0K1A5 114 aa11.82□□□□□ -0.52
CD55-204ENST00000367064 CCL24O00175 119 aa11.82□□□□□ -0.52
CD55-204ENST00000367064 GCN1Q92616 2671 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms