RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 TRBV10-1A0A0K0K1A3 114 aa10.66□□□□□ -0.7
NEK2-201ENST00000366998 CIDEAO60543 219 aa10.66□□□□□ -0.7
NEK2-201ENST00000366998 COTL1Q14019 142 aa10.66□□□□□ -0.7
NEK2-201ENST00000366998 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
NEK2-201ENST00000366998 TRBV7-3A0A075B6L6 115 aa10.66□□□□□ -0.7
NEK2-201ENST00000366998 HNRNPA3P51991 378 aaKnown RBP10.66□□□□□ -0.7
NEK2-201ENST00000366998 NBEAL2Q6ZNJ1 2754 aa10.65□□□□□ -0.7
NEK2-201ENST00000366998 GAGE12JA6NER3 117 aa10.65□□□□□ -0.7
NEK2-201ENST00000366998 PRSS29PA6NIE9 313 aa10.65□□□□□ -0.7
NEK2-201ENST00000366998 F8VRH5 84 aa10.65□□□□□ -0.7
NEK2-201ENST00000366998 GAGE1Q13065 139 aa10.65□□□□□ -0.7
NEK2-201ENST00000366998 GAGE4Q13068 117 aa10.65□□□□□ -0.7
NEK2-201ENST00000366998 GAGE5Q13069 117 aa10.65□□□□□ -0.7
NEK2-201ENST00000366998 GAGE13Q4V321 117 aa10.65□□□□□ -0.7
NEK2-201ENST00000366998 PLNP26678 52 aa10.64□□□□□ -0.71
NEK2-201ENST00000366998 EGFEM1PQ0D2K5 195 aa10.64□□□□□ -0.71
NEK2-201ENST00000366998 IGHV4-28A0A0C4DH34 117 aa10.64□□□□□ -0.71
NEK2-201ENST00000366998 DEFB4AO15263 64 aa10.64□□□□□ -0.71
NEK2-201ENST00000366998 ZC2HC1BQ5TFG8 222 aa10.64□□□□□ -0.71
NEK2-201ENST00000366998 SLC25A34Q6PIV7 304 aa10.64□□□□□ -0.71
NEK2-201ENST00000366998 ZMAT5Q9UDW3 170 aaKnown RBP10.64□□□□□ -0.71
NEK2-201ENST00000366998 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
NEK2-201ENST00000366998 COL6A5A8TX70 2615 aa10.63□□□□□ -0.71
NEK2-201ENST00000366998 TRBV6-4A0A1B0GX49 114 aa10.63□□□□□ -0.71
NEK2-201ENST00000366998 PMVKQ15126 192 aa10.63□□□□□ -0.71
NEK2-201ENST00000366998 FAM222AQ5U5X8 452 aa10.63□□□□□ -0.71
NEK2-201ENST00000366998 LINC00612Q8N6U2 182 aa10.63□□□□□ -0.71
NEK2-201ENST00000366998 LYRM9A8MSI8 78 aa10.62□□□□□ -0.71
NEK2-201ENST00000366998 G3V4G9 280 aa10.62□□□□□ -0.71
NEK2-201ENST00000366998 CTAG1AP78358 180 aa10.62□□□□□ -0.71
NEK2-201ENST00000366998 FHL2Q14192 279 aa10.62□□□□□ -0.71
NEK2-201ENST00000366998 RNF183Q96D59 192 aa10.62□□□□□ -0.71
NEK2-201ENST00000366998 OPRPNQ99935 248 aaPredicted RBP10.62□□□□□ -0.71
NEK2-201ENST00000366998 CHCHD7Q9BUK0 85 aa10.62□□□□□ -0.71
NEK2-201ENST00000366998 HHLA3Q9XRX5 114 aa10.62□□□□□ -0.71
NEK2-201ENST00000366998 PKD1L1Q8TDX9 2849 aa10.62□□□□□ -0.71
NEK2-201ENST00000366998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.61□□□□□ -0.71
NEK2-201ENST00000366998 LOC100131303A0A0U1RQF7 123 aa10.61□□□□□ -0.71
NEK2-201ENST00000366998 IGKV2-29A2NJV5 120 aaPredicted RBP10.61□□□□□ -0.71
NEK2-201ENST00000366998 COX8AP10176 69 aa10.61□□□□□ -0.71
NEK2-201ENST00000366998 NMUP48645 174 aa10.61□□□□□ -0.71
NEK2-201ENST00000366998 UBE2D3P61077 147 aa10.61□□□□□ -0.71
NEK2-201ENST00000366998 UBE2D2P62837 147 aa10.61□□□□□ -0.71
NEK2-201ENST00000366998 MIFP14174 115 aa10.61□□□□□ -0.71
NEK2-201ENST00000366998 DAZ4Q86SG3 579 aaKnown RBP10.61□□□□□ -0.71
NEK2-201ENST00000366998 PRADC1Q9BSG0 188 aa10.61□□□□□ -0.71
NEK2-201ENST00000366998 CST9LQ9H4G1 147 aa10.61□□□□□ -0.71
NEK2-201ENST00000366998 DAZ3Q9NR90 486 aaKnown RBP10.61□□□□□ -0.71
NEK2-201ENST00000366998 Q8NAQ8 132 aa10.6□□□□□ -0.71
NEK2-201ENST00000366998 IGLV4-3A0A075B6K6 122 aa10.59□□□□□ -0.71
NEK2-201ENST00000366998 M0R143 59 aa10.59□□□□□ -0.71
NEK2-201ENST00000366998 EREGO14944 169 aa10.59□□□□□ -0.71
NEK2-201ENST00000366998 PAPPA-AS1Q5QFB9 102 aa10.59□□□□□ -0.71
NEK2-201ENST00000366998 CEMP1Q6PRD7 247 aaPredicted RBP10.59□□□□□ -0.71
NEK2-201ENST00000366998 VCX2Q9H322 139 aa10.59□□□□□ -0.71
NEK2-201ENST00000366998 PYGO1Q9Y3Y4 419 aa10.59□□□□□ -0.71
NEK2-201ENST00000366998 SNHG12Q9BXW3 62 aa10.58□□□□□ -0.72
NEK2-201ENST00000366998 IGLV4-69A0A075B6H9 119 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 DAD1P61803 113 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 SPANXA1Q9NS26 97 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 MRPS16Q9Y3D3 137 aaKnown RBP10.57□□□□□ -0.72
NEK2-201ENST00000366998 IGKV2D-26A0A0A0MRZ7 120 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 C11orf86A6NJI1 115 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 A8MZ25 164 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 BATFQ16520 125 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 PCP2Q8IVA1 136 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 CELA1Q9UNI1 258 aa10.57□□□□□ -0.72
NEK2-201ENST00000366998 FGF6P10767 208 aa10.56□□□□□ -0.72
NEK2-201ENST00000366998 RNASE13Q5GAN3 156 aaKnown RBP10.56□□□□□ -0.72
NEK2-201ENST00000366998 NTM-AS1Q6ZSK4 140 aa10.56□□□□□ -0.72
NEK2-201ENST00000366998 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
NEK2-201ENST00000366998 MRPL52Q86TS9 123 aaKnown RBP10.55□□□□□ -0.72
NEK2-201ENST00000366998 BOD1L2Q8IYS8 172 aa10.55□□□□□ -0.72
NEK2-201ENST00000366998 RETNQ9HD89 108 aa10.55□□□□□ -0.72
NEK2-201ENST00000366998 SPART-AS1P0CW21 52 aa10.55□□□□□ -0.72
NEK2-201ENST00000366998 CRYBA4P53673 196 aa10.55□□□□□ -0.72
NEK2-201ENST00000366998 DGAT2L7PQ6IED9 249 aa10.55□□□□□ -0.72
NEK2-201ENST00000366998 Q6ZUT4 128 aa10.55□□□□□ -0.72
NEK2-201ENST00000366998 NPSP0C0P6 89 aa10.54□□□□□ -0.72
NEK2-201ENST00000366998 GYPEP15421 78 aa10.54□□□□□ -0.72
NEK2-201ENST00000366998 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
NEK2-201ENST00000366998 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
NEK2-201ENST00000366998 PRO0255Q9UI72 69 aa10.54□□□□□ -0.72
NEK2-201ENST00000366998 TMEM97Q5BJF2 176 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 TMEM170BQ5T4T1 132 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 FAM104AQ969W3 186 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 AMELXQ99217 191 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 TMEM243Q9BU79 118 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 CHAC1Q9BUX1 264 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 ANK2Q01484 3957 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 DNAH3Q8TD57 4116 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 TRBV25-1A0A075B6N4 114 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 TRAV8-6A0A0B4J262 113 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 UBE2L6O14933 153 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 LINC00694P0DN24 101 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
NEK2-201ENST00000366998 C2orf91Q6ZV80 131 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 TIMM21Q9BVV7 248 aa10.53□□□□□ -0.72
NEK2-201ENST00000366998 A0A0J9YXV3 536 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms