RNA–Protein interactions for RNA: ENST00000362944.1

RNU6-1260P-201, Transcript of RNA, U6 small nuclear 1260, pseudogene, humanhuman

BASIC

Gene RNU6-1260P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1260P-201ENST00000362944 IFNGP01579 166 aa-1.73□□□□□ -2.69
RNU6-1260P-201ENST00000362944 LSM3P62310 102 aaKnown RBP-1.73□□□□□ -2.69
RNU6-1260P-201ENST00000362944 LSM6P62312 80 aaKnown RBP-1.73□□□□□ -2.69
RNU6-1260P-201ENST00000362944 PLGLB1Q02325 96 aa-1.73□□□□□ -2.69
RNU6-1260P-201ENST00000362944 NUP35Q8NFH5 326 aa-1.73□□□□□ -2.69
RNU6-1260P-201ENST00000362944 C10orf82Q8WW14 230 aa-1.73□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SS18L2Q9UHA2 77 aa-1.73□□□□□ -2.69
RNU6-1260P-201ENST00000362944 TLN1Q9Y490 2541 aaKnown RBP-1.73□□□□□ -2.69
RNU6-1260P-201ENST00000362944 DMXL2Q8TDJ6 3036 aa-1.73□□□□□ -2.69
RNU6-1260P-201ENST00000362944 RANBP2P49792 3224 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SPTAN1Q13813 2472 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 COX8AP10176 69 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 UBE2D1P51668 147 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 MAGOHP61326 146 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 MRPS15P82914 257 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 KRTAP19-5Q3LI72 72 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 HSD17B12Q53GQ0 312 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 AKR1C8PQ5T2L2 129 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SNX29P2Q8IUI4 249 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 NAA60Q9H7X0 242 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 LYRM2Q9NU23 88 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 UFC1Q9Y3C8 167 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 KIAA0556O60303 1618 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 MYH3P11055 1940 aa-1.74□□□□□ -2.69
RNU6-1260P-201ENST00000362944 PAPPA2Q9BXP8 1791 aa-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 M0R135 149 aa-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 RPP14O95059 124 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SLC25A5P05141 298 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SRP9P49458 86 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 CCL18P55774 89 aa-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 CNPY4Q8N129 248 aa-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SMIM4Q8WVI0 70 aa-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 METTL1Q9UBP6 276 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 POLA1P09884 1462 aaPredicted RBP-1.75□□□□□ -2.69
RNU6-1260P-201ENST00000362944 PCF11O94913 1555 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 PRDM2Q13029 1718 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 CTXND1A0A1B0GTU2 59 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 PGRMC1O00264 195 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 S100A6P06703 90 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 S100A11P31949 105 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SLC35B3Q9H1N7 401 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SH3BGRL3Q9H299 93 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 NKIRAS1Q9NYS0 192 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 NOP16Q9Y3C1 178 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 ATP6V1DQ9Y5K8 247 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SBF2Q86WG5 1849 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SPTBN5Q9NRC6 3674 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 ANKRD50Q9ULJ7 1429 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 MRC1P22897 1456 aa-1.76□□□□□ -2.69
RNU6-1260P-201ENST00000362944 CCDC179H3BU77 68 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 UQCRQO14949 82 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 TCRAP04437 139 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 CST2P09228 141 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 COTL1Q14019 142 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 TMEM170BQ5T4T1 132 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 VSTM2AQ8TAG5 236 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 CBLN4Q9NTU7 201 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 ARMC1Q9NVT9 282 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 TULP4Q9NRJ4 1543 aa-1.77□□□□□ -2.69
RNU6-1260P-201ENST00000362944 DNAH5Q8TE73 4624 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 SPENQ96T58 3664 aaKnown RBP-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 TRBV7-6A0A0J9YX20 115 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 LINC00959A0A1B0GUT2 108 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 HIST1H1BP16401 226 aaKnown RBP-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 HRCT1Q6UXD1 115 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 ATP6V0E2Q8NHE4 81 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 AMELXQ99217 191 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 PHB2Q99623 299 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 NDUFA12Q9UI09 145 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 STOML2Q9UJZ1 356 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 MED23Q9ULK4 1368 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 MAGI1Q96QZ7 1491 aaPredicted RBP-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 LRRC37A3O60309 1634 aa-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.78□□□□□ -2.69
RNU6-1260P-201ENST00000362944 DNAH17Q9UFH2 4485 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 ATMQ13315 3056 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 KDM5CP41229 1560 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 ARHGEF12Q9NZN5 1544 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 TRBV7-4A0A0J9YYF1 115 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 ATG12O94817 140 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 PPP1R17O96001 155 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 SPA17Q15506 151 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 DYDC1Q8WWB3 177 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 ATP6V1G3Q96LB4 118 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 LLPHQ9BRT6 129 aaKnown RBP-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 RPRMQ9NS64 109 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 LINC00312Q9Y6C7 94 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 R4GMQ9 66 aa-1.79□□□□□ -2.7
RNU6-1260P-201ENST00000362944 KNDC1Q76NI1 1749 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 F8VRH5 84 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 J3QLW9 94 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 PIRTP0C851 137 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 RPL22P35268 128 aaKnown RBP-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 UBE2D3P61077 147 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 UBE2D2P62837 147 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 KRTAP20-1Q3LI63 56 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 LINC01545Q5VT33 79 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 USMG5Q96IX5 58 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 DNAJC15Q9Y5T4 150 aa-1.8□□□□□ -2.7
RNU6-1260P-201ENST00000362944 BORCS7-ASMTA0A0B4J1R7 106 aa-1.81□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms