RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 WISP2O76076 250 aa7.46□□□□□ -1.22
CHD3-202ENST00000358181 TANC1Q9C0D5 1861 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 MAP6D1Q9H9H5 199 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 TMEM14CQ9P0S9 112 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 TP53TG3Q9ULZ0 132 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 FAM240AA0A1B0GVK7 77 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 UFSP1Q6NVU6 142 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 Q6ZUT4 128 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 COL4A3Q01955 1670 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 TRBV10-1A0A0K0K1A3 114 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 NDUFV3P56181 108 aaKnown RBP7.45□□□□□ -1.22
CHD3-202ENST00000358181 LINC00322Q6ZN03 302 aaPredicted RBP7.45□□□□□ -1.22
CHD3-202ENST00000358181 G3V4G9 280 aa7.45□□□□□ -1.22
CHD3-202ENST00000358181 IGLC1P0CG04 106 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 C20orf197Q8N268 126 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 PLXNA2O75051 1894 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 PLCE1Q9P212 2302 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 Q6ZTI0 123 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 ZFAND2AQ8N6M9 145 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 C5orf56Q8N8D9 126 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 C10orf105Q8TEF2 133 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 TRBV6-6A0A0A6YYG2 114 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 TRBV6-1A0A0K0K1D8 114 aa7.44□□□□□ -1.22
CHD3-202ENST00000358181 ZNF106Q9H2Y7 1883 aaKnown RBP7.44□□□□□ -1.22
CHD3-202ENST00000358181 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
CHD3-202ENST00000358181 INSL3P51460 131 aa7.43□□□□□ -1.22
CHD3-202ENST00000358181 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
CHD3-202ENST00000358181 IL15RAQ13261 267 aa7.43□□□□□ -1.22
CHD3-202ENST00000358181 CCKP06307 115 aa7.43□□□□□ -1.22
CHD3-202ENST00000358181 V9GYV3 84 aa7.43□□□□□ -1.22
CHD3-202ENST00000358181 MIFP14174 115 aa7.43□□□□□ -1.22
CHD3-202ENST00000358181 MED13LQ71F56 2210 aa7.43□□□□□ -1.22
CHD3-202ENST00000358181 SPTAN1Q13813 2472 aaKnown RBP7.43□□□□□ -1.22
CHD3-202ENST00000358181 C10orf25Q5T742 122 aa7.42□□□□□ -1.22
CHD3-202ENST00000358181 C22orf34Q6ZV56 151 aa7.42□□□□□ -1.22
CHD3-202ENST00000358181 NDUFC2-KCTD14E9PQ53 114 aa7.42□□□□□ -1.22
CHD3-202ENST00000358181 C1orf137Q5JT78 98 aa7.42□□□□□ -1.22
CHD3-202ENST00000358181 PLXNB3Q9ULL4 1909 aa7.42□□□□□ -1.22
CHD3-202ENST00000358181 IGHV7-81A0A0B4J1V7 117 aa7.42□□□□□ -1.22
CHD3-202ENST00000358181 TMEM223A0PJW6 202 aa7.42□□□□□ -1.22
CHD3-202ENST00000358181 LINC01556Q5JQF7 62 aa7.42□□□□□ -1.22
CHD3-202ENST00000358181 C2orf16Q68DN1 1984 aa7.42□□□□□ -1.22
CHD3-202ENST00000358181 PRAC2D3DTV9 90 aa7.41□□□□□ -1.22
CHD3-202ENST00000358181 RSPO1Q2MKA7 263 aaPredicted RBP7.41□□□□□ -1.22
CHD3-202ENST00000358181 TDRG1Q3Y452 100 aa7.41□□□□□ -1.22
CHD3-202ENST00000358181 SYCNQ0VAF6 134 aa7.41□□□□□ -1.22
CHD3-202ENST00000358181 C10orf91Q5T1B1 145 aa7.41□□□□□ -1.22
CHD3-202ENST00000358181 PLA2G5P39877 138 aa7.41□□□□□ -1.22
CHD3-202ENST00000358181 J3QL48 77 aa7.41□□□□□ -1.22
CHD3-202ENST00000358181 PCOTHQ58A44 107 aa7.41□□□□□ -1.22
CHD3-202ENST00000358181 PIP4P1Q86T03 277 aa7.41□□□□□ -1.22
CHD3-202ENST00000358181 TRBV7-6A0A0J9YX20 115 aa7.4□□□□□ -1.22
CHD3-202ENST00000358181 ADORA2A-AS1P86434 159 aa7.4□□□□□ -1.22
CHD3-202ENST00000358181 FOXL2NBQ6ZUU3 175 aa7.4□□□□□ -1.22
CHD3-202ENST00000358181 TRBV27A0A0K0K1C4 114 aa7.4□□□□□ -1.22
CHD3-202ENST00000358181 ZNF726P1Q15940 193 aa7.4□□□□□ -1.22
CHD3-202ENST00000358181 CSDC2Q9Y534 153 aaKnown RBP7.4□□□□□ -1.22
CHD3-202ENST00000358181 IGFL3Q6UXB1 125 aa7.4□□□□□ -1.23
CHD3-202ENST00000358181 LOC107984640A0A0U1RRK4 108 aa7.39□□□□□ -1.23
CHD3-202ENST00000358181 C15orf65H3BRN8 121 aa7.39□□□□□ -1.23
CHD3-202ENST00000358181 DAZAP2Q15038 168 aaPredicted RBP7.39□□□□□ -1.23
CHD3-202ENST00000358181 MED13Q9UHV7 2174 aa7.39□□□□□ -1.23
CHD3-202ENST00000358181 RBX1P62877 108 aa7.39□□□□□ -1.23
CHD3-202ENST00000358181 DSCAML1Q8TD84 2053 aa7.39□□□□□ -1.23
CHD3-202ENST00000358181 PCDH15Q96QU1 1955 aa7.38□□□□□ -1.23
CHD3-202ENST00000358181 K7EN84 100 aa7.38□□□□□ -1.23
CHD3-202ENST00000358181 MT-ATP8P03928 68 aa7.38□□□□□ -1.23
CHD3-202ENST00000358181 BBC3Q96PG8 261 aaPredicted RBP7.38□□□□□ -1.23
CHD3-202ENST00000358181 KPRPQ5T749 579 aaPredicted RBP7.38□□□□□ -1.23
CHD3-202ENST00000358181 LINC00173Q6ZV60 143 aa7.38□□□□□ -1.23
CHD3-202ENST00000358181 ZFHX2Q9C0A1 2572 aaPredicted RBP7.38□□□□□ -1.23
CHD3-202ENST00000358181 A0A1W2PNU3 283 aaPredicted RBP7.37□□□□□ -1.23
CHD3-202ENST00000358181 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
CHD3-202ENST00000358181 TTTY13Q9BZ97 58 aa7.37□□□□□ -1.23
CHD3-202ENST00000358181 SBSPONQ8IVN8 264 aa7.37□□□□□ -1.23
CHD3-202ENST00000358181 CELA1Q9UNI1 258 aa7.37□□□□□ -1.23
CHD3-202ENST00000358181 NUP210Q8TEM1 1887 aaPredicted RBP7.37□□□□□ -1.23
CHD3-202ENST00000358181 IGLV1-44P01699 117 aa7.37□□□□□ -1.23
CHD3-202ENST00000358181 UNQ9165/PRO28630Q6UXU0 137 aa7.37□□□□□ -1.23
CHD3-202ENST00000358181 LYRM9A8MSI8 78 aa7.37□□□□□ -1.23
CHD3-202ENST00000358181 WFDC10AQ9H1F0 79 aa7.37□□□□□ -1.23
CHD3-202ENST00000358181 BEAN1Q3B7T3 259 aa7.36□□□□□ -1.23
CHD3-202ENST00000358181 DEFB116Q30KQ4 102 aa7.36□□□□□ -1.23
CHD3-202ENST00000358181 C7orf65Q6ZTY9 151 aa7.36□□□□□ -1.23
CHD3-202ENST00000358181 M0QXV9 152 aa7.36□□□□□ -1.23
CHD3-202ENST00000358181 LINC00311Q8N616 119 aa7.36□□□□□ -1.23
CHD3-202ENST00000358181 TOMM6Q96B49 74 aa7.36□□□□□ -1.23
CHD3-202ENST00000358181 LINC00467Q9BRT7 94 aa7.36□□□□□ -1.23
CHD3-202ENST00000358181 PTH2Q96A98 100 aa7.36□□□□□ -1.23
CHD3-202ENST00000358181 SMR3AQ99954 134 aa7.35□□□□□ -1.23
CHD3-202ENST00000358181 NUPR1O60356 82 aa7.35□□□□□ -1.23
CHD3-202ENST00000358181 RPL28P46779 137 aaKnown RBP7.35□□□□□ -1.23
CHD3-202ENST00000358181 LINC01548A6NM66 108 aa7.35□□□□□ -1.23
CHD3-202ENST00000358181 PATE2Q6UY27 113 aa7.35□□□□□ -1.23
CHD3-202ENST00000358181 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
CHD3-202ENST00000358181 IGKV2-30P06310 120 aa7.35□□□□□ -1.23
CHD3-202ENST00000358181 WFDC2Q14508 124 aa7.35□□□□□ -1.23
CHD3-202ENST00000358181 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
CHD3-202ENST00000358181 TNCP24821 2201 aa7.34□□□□□ -1.23
CHD3-202ENST00000358181 PDE6GP18545 87 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms