RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TRBV30A0A0K0K1B3 111 aa13.17□□□□□ -0.3
APP-202ENST00000348990 KLK9Q2XQG4 91 aa13.17□□□□□ -0.3
APP-202ENST00000348990 APRG1Q8IVJ8 170 aa13.17□□□□□ -0.3
APP-202ENST00000348990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.17□□□□□ -0.3
APP-202ENST00000348990 IGKV2-29A2NJV5 120 aaPredicted RBP13.17□□□□□ -0.3
APP-202ENST00000348990 MEIG1Q5JSS6 88 aa13.17□□□□□ -0.3
APP-202ENST00000348990 DCANP1Q8TF63 244 aa13.16□□□□□ -0.3
APP-202ENST00000348990 CHCHD5Q9BSY4 110 aa13.15□□□□□ -0.3
APP-202ENST00000348990 C9orf85Q96MD7 179 aa13.15□□□□□ -0.3
APP-202ENST00000348990 IGHG2P01859 326 aa13.14□□□□□ -0.31
APP-202ENST00000348990 SYNJ2BPP57105 145 aa13.14□□□□□ -0.31
APP-202ENST00000348990 MYO9AB2RTY4 2548 aa13.14□□□□□ -0.31
APP-202ENST00000348990 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
APP-202ENST00000348990 IGHV1-58A0A0C4DH39 117 aa13.14□□□□□ -0.31
APP-202ENST00000348990 C10orf99Q6UWK7 81 aa13.14□□□□□ -0.31
APP-202ENST00000348990 A0A0J9YX75 114 aa13.13□□□□□ -0.31
APP-202ENST00000348990 KLRB1Q12918 225 aa13.13□□□□□ -0.31
APP-202ENST00000348990 Q9UF83 564 aa13.12□□□□□ -0.31
APP-202ENST00000348990 SPTBN4Q9H254 2564 aa13.12□□□□□ -0.31
APP-202ENST00000348990 C19orf54Q5BKX5 351 aa13.12□□□□□ -0.31
APP-202ENST00000348990 MIAQ16674 131 aa13.11□□□□□ -0.31
APP-202ENST00000348990 IGHV4-61A0A0C4DH41 118 aa13.11□□□□□ -0.31
APP-202ENST00000348990 WNK1Q9H4A3 2382 aa13.1□□□□□ -0.31
APP-202ENST00000348990 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
APP-202ENST00000348990 YAE1D1Q9NRH1 226 aa13.1□□□□□ -0.31
APP-202ENST00000348990 ZFHX3Q15911 3703 aa13.1□□□□□ -0.31
APP-202ENST00000348990 H3BT86 120 aa13.09□□□□□ -0.31
APP-202ENST00000348990 VSIG2Q96IQ7 327 aa13.09□□□□□ -0.31
APP-202ENST00000348990 M0QXV9 152 aa13.09□□□□□ -0.31
APP-202ENST00000348990 ABCA2Q9BZC7 2435 aa13.09□□□□□ -0.31
APP-202ENST00000348990 USP9XQ93008 2570 aaPredicted RBP13.09□□□□□ -0.31
APP-202ENST00000348990 LITAFQ99732 161 aa13.08□□□□□ -0.32
APP-202ENST00000348990 TMEM61Q8N0U2 210 aa13.08□□□□□ -0.32
APP-202ENST00000348990 CDKN2A-AS1Q9UH64 79 aa13.08□□□□□ -0.32
APP-202ENST00000348990 H3BUA1 57 aa13.07□□□□□ -0.32
APP-202ENST00000348990 MRPS36P82909 103 aaKnown RBP13.07□□□□□ -0.32
APP-202ENST00000348990 FAM236AA0A1B0GUQ0 79 aa13.06□□□□□ -0.32
APP-202ENST00000348990 FAM236BA0A1B0GV22 79 aa13.06□□□□□ -0.32
APP-202ENST00000348990 LST1O00453 97 aa13.06□□□□□ -0.32
APP-202ENST00000348990 K7EMT4 169 aa13.06□□□□□ -0.32
APP-202ENST00000348990 DEFB131AP59861 70 aa13.06□□□□□ -0.32
APP-202ENST00000348990 TMEM101Q96IK0 257 aa13.06□□□□□ -0.32
APP-202ENST00000348990 PIMREGQ9BSJ6 248 aa13.06□□□□□ -0.32
APP-202ENST00000348990 Q9H8V8 135 aa13.06□□□□□ -0.32
APP-202ENST00000348990 IGHV3OR16-12A0A075B7B8 117 aa13.05□□□□□ -0.32
APP-202ENST00000348990 A6NDX4 124 aa13.05□□□□□ -0.32
APP-202ENST00000348990 Q6Q795 121 aa13.05□□□□□ -0.32
APP-202ENST00000348990 SETD2Q9BYW2 2564 aaPredicted RBP13.05□□□□□ -0.32
APP-202ENST00000348990 LINC00467Q9BRT7 94 aa13.05□□□□□ -0.32
APP-202ENST00000348990 TRAV13-1A0A0B4J241 112 aa13.04□□□□□ -0.32
APP-202ENST00000348990 LY6DQ14210 128 aa13.04□□□□□ -0.32
APP-202ENST00000348990 SPANXDQ9BXN6 97 aa13.04□□□□□ -0.32
APP-202ENST00000348990 SPANXCQ9NY87 97 aa13.04□□□□□ -0.32
APP-202ENST00000348990 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
APP-202ENST00000348990 K7EQG2 157 aa13.03□□□□□ -0.32
APP-202ENST00000348990 LINC01587Q99440 93 aa13.03□□□□□ -0.32
APP-202ENST00000348990 PYGO1Q9Y3Y4 419 aa13.03□□□□□ -0.32
APP-202ENST00000348990 IGLV1-40P01703 118 aa13.03□□□□□ -0.32
APP-202ENST00000348990 Q6ZSN1 163 aa13.03□□□□□ -0.32
APP-202ENST00000348990 POLQO75417 2590 aa13.02□□□□□ -0.32
APP-202ENST00000348990 TINCRA0A1B0GVN0 87 aa13.02□□□□□ -0.32
APP-202ENST00000348990 ATP5J2P56134 94 aa13.02□□□□□ -0.32
APP-202ENST00000348990 KHDC1LQ5JSQ8 128 aa13.02□□□□□ -0.32
APP-202ENST00000348990 TLN2Q9Y4G6 2542 aa13.02□□□□□ -0.33
APP-202ENST00000348990 IGHV4-59P01825 116 aa13.01□□□□□ -0.33
APP-202ENST00000348990 C19orf84I3L1E1 186 aa13.01□□□□□ -0.33
APP-202ENST00000348990 PRIMA1Q86XR5 153 aa13.01□□□□□ -0.33
APP-202ENST00000348990 SPANXA1Q9NS26 97 aa13□□□□□ -0.33
APP-202ENST00000348990 UBE2D4Q9Y2X8 147 aa13□□□□□ -0.33
APP-202ENST00000348990 ACACBO00763 2458 aa13□□□□□ -0.33
APP-202ENST00000348990 RBMY1A1P0DJD3 496 aaKnown RBP13□□□□□ -0.33
APP-202ENST00000348990 RBMY1CP0DJD4 496 aa13□□□□□ -0.33
APP-202ENST00000348990 RBMY1FQ15415 496 aaKnown RBP13□□□□□ -0.33
APP-202ENST00000348990 FAM208BQ5VWN6 2430 aa12.99□□□□□ -0.33
APP-202ENST00000348990 RS1O15537 224 aa12.99□□□□□ -0.33
APP-202ENST00000348990 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
APP-202ENST00000348990 IGKV3OR2-268A0A0C4DH90 116 aa12.98□□□□□ -0.33
APP-202ENST00000348990 HOXD3P31249 432 aaPredicted RBP12.98□□□□□ -0.33
APP-202ENST00000348990 LINC00308Q8TCZ7 52 aa12.98□□□□□ -0.33
APP-202ENST00000348990 CCL19Q99731 98 aa12.98□□□□□ -0.33
APP-202ENST00000348990 CHCHD7Q9BUK0 85 aa12.98□□□□□ -0.33
APP-202ENST00000348990 NDUFA7O95182 113 aa12.98□□□□□ -0.33
APP-202ENST00000348990 BAALC-AS2P0C853 105 aa12.98□□□□□ -0.33
APP-202ENST00000348990 C9orf153Q5TBE3 101 aa12.98□□□□□ -0.33
APP-202ENST00000348990 GAGE2AQ6NT46 116 aa12.98□□□□□ -0.33
APP-202ENST00000348990 FAM104AQ969W3 186 aa12.98□□□□□ -0.33
APP-202ENST00000348990 FAM110AQ9BQ89 295 aa12.98□□□□□ -0.33
APP-202ENST00000348990 CENPEQ02224 2701 aa12.97□□□□□ -0.33
APP-202ENST00000348990 CACNA1AO00555 2505 aa12.97□□□□□ -0.33
APP-202ENST00000348990 IGHV4-30-2A0A087WSY4 118 aa12.97□□□□□ -0.33
APP-202ENST00000348990 IGHV3-53P01767 116 aa12.97□□□□□ -0.33
APP-202ENST00000348990 COX6A2Q02221 97 aa12.97□□□□□ -0.33
APP-202ENST00000348990 CUBNO60494 3623 aa12.96□□□□□ -0.33
APP-202ENST00000348990 MSMBP08118 114 aa12.96□□□□□ -0.33
APP-202ENST00000348990 ZNF415Q09FC8 603 aa12.96□□□□□ -0.33
APP-202ENST00000348990 DAZ2Q13117 558 aaKnown RBP12.96□□□□□ -0.33
APP-202ENST00000348990 DAZ4Q86SG3 579 aaKnown RBP12.96□□□□□ -0.33
APP-202ENST00000348990 CITED2Q99967 270 aaPredicted RBP12.96□□□□□ -0.33
APP-202ENST00000348990 DAZ3Q9NR90 486 aaKnown RBP12.96□□□□□ -0.33
APP-202ENST00000348990 AVPP01185 164 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms