RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SDHAF1A6NFY7 115 aa10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 APCSP02743 223 aa10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 S100A8P05109 93 aa10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 AMMECR1LQ6DCA0 310 aa10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 ENHOQ6UWT2 76 aa10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 LINC00269Q8N2A0 174 aa10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 NUP35Q8NFH5 326 aa10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 RPL39LQ96EH5 51 aaKnown RBP10.46□□□□□ -0.73
TSPAN4-201ENST00000346501 PKHD1P08F94 4074 aa10.45□□□□□ -0.74
TSPAN4-201ENST00000346501 I3L3M4 83 aa10.45□□□□□ -0.74
TSPAN4-201ENST00000346501 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 TRAV8-4A0A0B4J246 113 aa10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 TRBV6-5A0A0K0K1A5 114 aa10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 H7C423 109 aa10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 PPP1R2P9O14990 202 aa10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 HLA-DQA1P01909 254 aa10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 REG3AQ06141 175 aa10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 CLPSL2Q6UWE3 100 aa10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 PRR34Q9NV39 138 aa10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
TSPAN4-201ENST00000346501 SMIM27A0A1W2PRY6 76 aa10.43□□□□□ -0.74
TSPAN4-201ENST00000346501 RAB4AP20338 218 aa10.43□□□□□ -0.74
TSPAN4-201ENST00000346501 PNRC1Q12796 327 aaPredicted RBP10.43□□□□□ -0.74
TSPAN4-201ENST00000346501 AMN1Q8IY45 258 aa10.43□□□□□ -0.74
TSPAN4-201ENST00000346501 DEFB104AQ8WTQ1 72 aa10.43□□□□□ -0.74
TSPAN4-201ENST00000346501 BTF3L4Q96K17 158 aa10.43□□□□□ -0.74
TSPAN4-201ENST00000346501 KRTAP17-1Q9BYP8 105 aa10.43□□□□□ -0.74
TSPAN4-201ENST00000346501 F8W036 122 aa10.42□□□□□ -0.74
TSPAN4-201ENST00000346501 KRTAP10-1P60331 282 aa10.42□□□□□ -0.74
TSPAN4-201ENST00000346501 RNASEKQ6P5S7 137 aaKnown RBP10.42□□□□□ -0.74
TSPAN4-201ENST00000346501 CAMPP49913 170 aa10.41□□□□□ -0.74
TSPAN4-201ENST00000346501 SMAGPQ0VAQ4 97 aa10.41□□□□□ -0.74
TSPAN4-201ENST00000346501 WFDC2Q14508 124 aa10.41□□□□□ -0.74
TSPAN4-201ENST00000346501 CLLU1Q5K131 121 aa10.41□□□□□ -0.74
TSPAN4-201ENST00000346501 TMEM101Q96IK0 257 aa10.41□□□□□ -0.74
TSPAN4-201ENST00000346501 TMEM70Q9BUB7 260 aa10.41□□□□□ -0.74
TSPAN4-201ENST00000346501 PCLOQ9Y6V0 5065 aa10.4□□□□□ -0.74
TSPAN4-201ENST00000346501 MT-ND4LP03901 98 aa10.4□□□□□ -0.74
TSPAN4-201ENST00000346501 FCER1GP30273 86 aa10.4□□□□□ -0.74
TSPAN4-201ENST00000346501 HBBP68871 147 aa10.4□□□□□ -0.74
TSPAN4-201ENST00000346501 Q8N1X5 172 aa10.4□□□□□ -0.74
TSPAN4-201ENST00000346501 C20orf203Q8NBC4 194 aa10.4□□□□□ -0.74
TSPAN4-201ENST00000346501 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
TSPAN4-201ENST00000346501 KIR2DL4Q99706 377 aa10.4□□□□□ -0.74
TSPAN4-201ENST00000346501 DYNC1H1Q14204 4646 aaKnown RBP10.4□□□□□ -0.75
TSPAN4-201ENST00000346501 IGLV4-60A0A075B6I1 120 aa10.39□□□□□ -0.75
TSPAN4-201ENST00000346501 LINC00862A6NCI5 91 aa10.39□□□□□ -0.75
TSPAN4-201ENST00000346501 VCYO14598 125 aa10.39□□□□□ -0.75
TSPAN4-201ENST00000346501 ZNF25P17030 456 aaPredicted RBP10.39□□□□□ -0.75
TSPAN4-201ENST00000346501 FAM104BQ5XKR9 115 aa10.39□□□□□ -0.75
TSPAN4-201ENST00000346501 IGLV10-54A0A075B6I4 117 aa10.38□□□□□ -0.75
TSPAN4-201ENST00000346501 CKS2P33552 79 aa10.38□□□□□ -0.75
TSPAN4-201ENST00000346501 MRPL54Q6P161 138 aaKnown RBP10.38□□□□□ -0.75
TSPAN4-201ENST00000346501 ANAPC16Q96DE5 110 aa10.38□□□□□ -0.75
TSPAN4-201ENST00000346501 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 IGKV2-29A2NJV5 120 aaPredicted RBP10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 USP17L23D6RBM5 183 aa10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 FGF6P10767 208 aa10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 SUMO2P61956 95 aaKnown RBP10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 DGAT2L7PQ6IED9 249 aa10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 CLRN3Q8NCR9 226 aa10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 TMEM242Q9NWH2 141 aa10.37□□□□□ -0.75
TSPAN4-201ENST00000346501 C7orf77A4D0Y5 90 aa10.36□□□□□ -0.75
TSPAN4-201ENST00000346501 EPM2AB3EWF7 344 aa10.36□□□□□ -0.75
TSPAN4-201ENST00000346501 TCAPO15273 167 aa10.36□□□□□ -0.75
TSPAN4-201ENST00000346501 POLR2KP53803 58 aaKnown RBP10.36□□□□□ -0.75
TSPAN4-201ENST00000346501 UQCC3Q6UW78 93 aa10.36□□□□□ -0.75
TSPAN4-201ENST00000346501 ATP5L2Q7Z4Y8 100 aa10.36□□□□□ -0.75
TSPAN4-201ENST00000346501 OR5A1Q8NGJ0 315 aa10.36□□□□□ -0.75
TSPAN4-201ENST00000346501 TMEM18Q96B42 140 aa10.36□□□□□ -0.75
TSPAN4-201ENST00000346501 SMKR1H3BMG3 65 aa10.35□□□□□ -0.75
TSPAN4-201ENST00000346501 PPBPP02775 128 aa10.35□□□□□ -0.75
TSPAN4-201ENST00000346501 RPS10P46783 165 aaKnown RBP10.35□□□□□ -0.75
TSPAN4-201ENST00000346501 XGP55808 180 aa10.35□□□□□ -0.75
TSPAN4-201ENST00000346501 MRPL51Q4U2R6 128 aaKnown RBP10.35□□□□□ -0.75
TSPAN4-201ENST00000346501 CFAP161Q6P656 301 aa10.35□□□□□ -0.75
TSPAN4-201ENST00000346501 C20orf78Q9BR46 151 aa10.35□□□□□ -0.75
TSPAN4-201ENST00000346501 AP5S1Q9NUS5 200 aa10.35□□□□□ -0.75
TSPAN4-201ENST00000346501 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
TSPAN4-201ENST00000346501 TSHBP01222 138 aa10.34□□□□□ -0.75
TSPAN4-201ENST00000346501 FAM229AH3BQW9 127 aa10.33□□□□□ -0.76
TSPAN4-201ENST00000346501 ESDP10768 282 aa10.33□□□□□ -0.76
TSPAN4-201ENST00000346501 NRACQ8N912 160 aa10.32□□□□□ -0.76
TSPAN4-201ENST00000346501 TRBV24-1A0A075B6N3 115 aa10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 A0A1B0GXF2 115 aa10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 hDV102S1A0JD36 115 aa10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 GAGE12HA6NDE8 117 aa10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 PHOX2AO14813 284 aa10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 SS18Q15532 418 aa10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 MRPL52Q86TS9 123 aaKnown RBP10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 ORMDL3Q8N138 153 aa10.31□□□□□ -0.76
TSPAN4-201ENST00000346501 D6R8Y8 96 aa10.3□□□□□ -0.76
TSPAN4-201ENST00000346501 PRSS1P07477 247 aa10.3□□□□□ -0.76
TSPAN4-201ENST00000346501 RPL32P62910 135 aaKnown RBP10.3□□□□□ -0.76
TSPAN4-201ENST00000346501 KRTAP26-1Q6PEX3 210 aa10.3□□□□□ -0.76
TSPAN4-201ENST00000346501 CHCHD10Q8WYQ3 142 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms