RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 GAGE12JA6NER3 117 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 IGIPA6NJ69 53 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 SPART-AS1P0CW21 52 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 UBE2D3P61077 147 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 UBE2D2P62837 147 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 GAGE1Q13065 139 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 GAGE4Q13068 117 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 GAGE5Q13069 117 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 GAGE13Q4V321 117 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 TIMM17AQ99595 171 aa15.18■□□□□ 0.02
TSPAN3-202ENST00000346495 TRAV12-1A0A0B4J245 112 aa15.17■□□□□ 0.02
TSPAN3-202ENST00000346495 IGHV3-38A0A0C4DH36 116 aa15.17■□□□□ 0.02
TSPAN3-202ENST00000346495 DAD1P61803 113 aa15.17■□□□□ 0.02
TSPAN3-202ENST00000346495 ODF1Q14990 250 aa15.17■□□□□ 0.02
TSPAN3-202ENST00000346495 SPATA45Q537H7 98 aa15.17■□□□□ 0.02
TSPAN3-202ENST00000346495 KPRPQ5T749 579 aaPredicted RBP15.17■□□□□ 0.02
TSPAN3-202ENST00000346495 HHLA3Q9XRX5 114 aa15.17■□□□□ 0.02
TSPAN3-202ENST00000346495 ANK2Q01484 3957 aa15.16■□□□□ 0.02
TSPAN3-202ENST00000346495 TEX48A0A1B0GUV7 120 aa15.16■□□□□ 0.02
TSPAN3-202ENST00000346495 BAALCQ8WXS3 180 aa15.16■□□□□ 0.02
TSPAN3-202ENST00000346495 A0A087WX48 190 aa15.15■□□□□ 0.02
TSPAN3-202ENST00000346495 HSBP1L1C9JCN9 74 aa15.15■□□□□ 0.02
TSPAN3-202ENST00000346495 CHCHD7Q9BUK0 85 aa15.15■□□□□ 0.02
TSPAN3-202ENST00000346495 RETNQ9HD89 108 aa15.15■□□□□ 0.02
TSPAN3-202ENST00000346495 CELA1Q9UNI1 258 aa15.15■□□□□ 0.02
TSPAN3-202ENST00000346495 PKD1L1Q8TDX9 2849 aa15.15■□□□□ 0.02
TSPAN3-202ENST00000346495 MAJINQ3KP22 176 aa15.14■□□□□ 0.01
TSPAN3-202ENST00000346495 LOC100131303A0A0U1RQF7 123 aa15.14■□□□□ 0.01
TSPAN3-202ENST00000346495 PRO0255Q9UI72 69 aa15.14■□□□□ 0.01
TSPAN3-202ENST00000346495 hDV102S1A0JD36 115 aa15.13■□□□□ 0.01
TSPAN3-202ENST00000346495 CRYBA4P53673 196 aa15.13■□□□□ 0.01
TSPAN3-202ENST00000346495 PYGO1Q9Y3Y4 419 aa15.12■□□□□ 0.01
TSPAN3-202ENST00000346495 DNAH3Q8TD57 4116 aa15.12■□□□□ 0.01
TSPAN3-202ENST00000346495 K7EIL1 84 aa15.11■□□□□ 0.01
TSPAN3-202ENST00000346495 DPM2O94777 84 aa15.11■□□□□ 0.01
TSPAN3-202ENST00000346495 IGKCP01834 107 aa15.11■□□□□ 0.01
TSPAN3-202ENST00000346495 ATP5G1P05496 136 aa15.11■□□□□ 0.01
TSPAN3-202ENST00000346495 F8VRH5 84 aa15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 PRB2P02812 416 aaPredicted RBP15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 LINC00694P0DN24 101 aa15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 LURAP1LQ8IV03 231 aa15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 GTSF1LQ9H1H1 148 aa15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 MRPL35Q9NZE8 188 aaKnown RBP15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 CHTOPQ9Y3Y2 248 aaKnown RBP15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 PRSS29PA6NIE9 313 aa15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 NPSP0C0P6 89 aa15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 PMVKQ15126 192 aa15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 C11orf68Q9H3H3 251 aaKnown RBP15.1■□□□□ 0.01
TSPAN3-202ENST00000346495 PLNP26678 52 aa15.09■□□□□ 0.01
TSPAN3-202ENST00000346495 PAPPA-AS1Q5QFB9 102 aa15.09■□□□□ 0.01
TSPAN3-202ENST00000346495 SPANXA1Q9NS26 97 aa15.09■□□□□ 0.01
TSPAN3-202ENST00000346495 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.08■□□□□ 0
TSPAN3-202ENST00000346495 IGKV2-29A2NJV5 120 aaPredicted RBP15.08■□□□□ 0
TSPAN3-202ENST00000346495 GYPEP15421 78 aa15.08■□□□□ 0
TSPAN3-202ENST00000346495 DDTP30046 118 aa15.08■□□□□ 0
TSPAN3-202ENST00000346495 SBSPONQ8IVN8 264 aa15.08■□□□□ 0
TSPAN3-202ENST00000346495 PAX4O43316 350 aa15.07■□□□□ 0
TSPAN3-202ENST00000346495 NBEAL2Q6ZNJ1 2754 aa15.07■□□□□ 0
TSPAN3-202ENST00000346495 NTM-AS1Q6ZSK4 140 aa15.07■□□□□ 0
TSPAN3-202ENST00000346495 CST9LQ9H4G1 147 aa15.07■□□□□ 0
TSPAN3-202ENST00000346495 UBE2D4Q9Y2X8 147 aa15.07■□□□□ 0
TSPAN3-202ENST00000346495 IGLV4-3A0A075B6K6 122 aa15.06■□□□□ 0
TSPAN3-202ENST00000346495 TMEM97Q5BJF2 176 aa15.06■□□□□ 0
TSPAN3-202ENST00000346495 DEFB121Q5J5C9 76 aa15.06■□□□□ 0
TSPAN3-202ENST00000346495 IGLC3P0DOY3 106 aa15.06■□□□□ 0
TSPAN3-202ENST00000346495 MIEN1Q9BRT3 115 aa15.06■□□□□ 0
TSPAN3-202ENST00000346495 TIMM21Q9BVV7 248 aa15.06■□□□□ 0
TSPAN3-202ENST00000346495 OPRPNQ99935 248 aaPredicted RBP15.05■□□□□ -0
TSPAN3-202ENST00000346495 SPATA25Q9BR10 227 aa15.05■□□□□ -0
TSPAN3-202ENST00000346495 VCX2Q9H322 139 aa15.05■□□□□ -0
TSPAN3-202ENST00000346495 F5H768 121 aa15.04■□□□□ -0
TSPAN3-202ENST00000346495 SMAGPQ0VAQ4 97 aa15.04■□□□□ -0
TSPAN3-202ENST00000346495 UQCR10Q9UDW1 63 aa15.04■□□□□ -0
TSPAN3-202ENST00000346495 TRBV25-1A0A075B6N4 114 aa15.03■□□□□ -0
TSPAN3-202ENST00000346495 C12orf74Q32Q52 190 aa15.03■□□□□ -0
TSPAN3-202ENST00000346495 ZC2HC1BQ5TFG8 222 aa15.03■□□□□ -0
TSPAN3-202ENST00000346495 STPG4Q8N801 248 aa15.03■□□□□ -0
TSPAN3-202ENST00000346495 ATP6V0E2Q8NHE4 81 aa15.03■□□□□ -0
TSPAN3-202ENST00000346495 TMEM243Q9BU79 118 aa15.03■□□□□ -0
TSPAN3-202ENST00000346495 LINC00587B1AMM8 73 aa15.03■□□□□ -0
TSPAN3-202ENST00000346495 VSIG2Q96IQ7 327 aa15.03■□□□□ -0
TSPAN3-202ENST00000346495 ANKRD39Q53RE8 183 aa15.02□□□□□ -0.01
TSPAN3-202ENST00000346495 CEMP1Q6PRD7 247 aaPredicted RBP15.02□□□□□ -0.01
TSPAN3-202ENST00000346495 C14orf144Q96I85 54 aa15.02□□□□□ -0.01
TSPAN3-202ENST00000346495 AMELXQ99217 191 aa15.02□□□□□ -0.01
TSPAN3-202ENST00000346495 TM2D3Q9BRN9 247 aa15.02□□□□□ -0.01
TSPAN3-202ENST00000346495 A0A0J9YY99 117 aa15.01□□□□□ -0.01
TSPAN3-202ENST00000346495 H7C423 109 aa15.01□□□□□ -0.01
TSPAN3-202ENST00000346495 HTN3P15516 51 aa15.01□□□□□ -0.01
TSPAN3-202ENST00000346495 MRPS36P82909 103 aaKnown RBP15.01□□□□□ -0.01
TSPAN3-202ENST00000346495 MRPL52Q86TS9 123 aaKnown RBP15.01□□□□□ -0.01
TSPAN3-202ENST00000346495 FAM104AQ969W3 186 aa15.01□□□□□ -0.01
TSPAN3-202ENST00000346495 TRBV6-8A0A0A6YYG3 113 aa15□□□□□ -0.01
TSPAN3-202ENST00000346495 UBE2L6O14933 153 aa15□□□□□ -0.01
TSPAN3-202ENST00000346495 DGAT2L7PQ6IED9 249 aa15□□□□□ -0.01
TSPAN3-202ENST00000346495 CSDC2Q9Y534 153 aaKnown RBP15□□□□□ -0.01
TSPAN3-202ENST00000346495 IGLV4-69A0A075B6H9 119 aa14.99□□□□□ -0.01
TSPAN3-202ENST00000346495 TRAV26-1A0A087WT03 109 aa14.99□□□□□ -0.01
TSPAN3-202ENST00000346495 A0A0J9YWU9 116 aa14.99□□□□□ -0.01
TSPAN3-202ENST00000346495 FGF6P10767 208 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms