RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 IGKV3-7A0A075B6H7 116 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 TRBV6-1A0A0K0K1D8 114 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 CTSGP08311 255 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 MRPS36P82909 103 aaKnown RBP6.56□□□□□ -1.36
SP140-201ENST00000343805 CLEC19AQ6UXS0 136 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 GATA1P15976 413 aaPredicted RBP6.56□□□□□ -1.36
SP140-201ENST00000343805 FP248Q71RG6 208 aaPredicted RBP6.56□□□□□ -1.36
SP140-201ENST00000343805 LY6G5BQ8NDX9 201 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 LAMTOR3Q9UHA4 124 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 FAM208BQ5VWN6 2430 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 MYO18BQ8IUG5 2567 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 MRPL51Q4U2R6 128 aaKnown RBP6.56□□□□□ -1.36
SP140-201ENST00000343805 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 Q8N8P6 123 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 RNF5Q99942 180 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 SMAD5-AS1Q9Y6J3 95 aa6.56□□□□□ -1.36
SP140-201ENST00000343805 NOTCH3Q9UM47 2321 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 IGHV7-81A0A0B4J1V7 117 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 COPS9Q8WXC6 57 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 PRO1854Q9UHT4 67 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 TRAV41A0A0B4J266 112 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 ATP6V0E1O15342 81 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 NDUFA3O95167 84 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 FAM104BQ5XKR9 115 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 ORMDL3Q8N138 153 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 NPBQ8NG41 125 aa6.55□□□□□ -1.36
SP140-201ENST00000343805 CFC1BP0CG36 223 aa6.54□□□□□ -1.36
SP140-201ENST00000343805 CFC1P0CG37 223 aa6.54□□□□□ -1.36
SP140-201ENST00000343805 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
SP140-201ENST00000343805 DEFB1P60022 68 aa6.54□□□□□ -1.36
SP140-201ENST00000343805 CHD6Q8TD26 2715 aa6.54□□□□□ -1.36
SP140-201ENST00000343805 ZANQ9Y493 2812 aa6.54□□□□□ -1.36
SP140-201ENST00000343805 CFHR3Q02985 330 aa6.54□□□□□ -1.36
SP140-201ENST00000343805 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
SP140-201ENST00000343805 LYPD1Q8N2G4 141 aa6.54□□□□□ -1.36
SP140-201ENST00000343805 DEFB104AQ8WTQ1 72 aa6.54□□□□□ -1.36
SP140-201ENST00000343805 ODF3BA8MYP8 253 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 PLNP26678 52 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 SAA4P35542 130 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 BRD3OSQ6XYD6 125 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 Q8N9W7 124 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 BPESC1Q9GZL8 116 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 TLN2Q9Y4G6 2542 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 M0R1W7 72 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 C2orf82Q6UX34 121 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 C9orf139Q6ZV77 190 aa6.53□□□□□ -1.36
SP140-201ENST00000343805 USP9XQ93008 2570 aaPredicted RBP6.52□□□□□ -1.37
SP140-201ENST00000343805 TRBV7-1A0A0A6YYK4 115 aa6.52□□□□□ -1.37
SP140-201ENST00000343805 PDE6HQ13956 83 aa6.52□□□□□ -1.37
SP140-201ENST00000343805 SMCR5Q8TEV8 140 aa6.52□□□□□ -1.37
SP140-201ENST00000343805 IGHG2P01859 326 aa6.52□□□□□ -1.37
SP140-201ENST00000343805 PRSS1P07477 247 aa6.52□□□□□ -1.37
SP140-201ENST00000343805 A0A0B4J2C4 111 aa6.51□□□□□ -1.37
SP140-201ENST00000343805 IGHV3-33P01772 117 aa6.51□□□□□ -1.37
SP140-201ENST00000343805 LY6EQ16553 131 aa6.51□□□□□ -1.37
SP140-201ENST00000343805 TRAV40A0A0B4J280 105 aa6.51□□□□□ -1.37
SP140-201ENST00000343805 IGHV3-11P01762 117 aa6.51□□□□□ -1.37
SP140-201ENST00000343805 SYNJ2BPP57105 145 aa6.51□□□□□ -1.37
SP140-201ENST00000343805 C11orf71Q6IPW1 123 aa6.51□□□□□ -1.37
SP140-201ENST00000343805 SETD2Q9BYW2 2564 aaPredicted RBP6.51□□□□□ -1.37
SP140-201ENST00000343805 TRBV30A0A0K0K1B3 111 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 KNCNA6PVL3 124 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 TRGV3P03979 118 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 IGF1P05019 195 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 FOXC2Q99958 501 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 KLK15Q9H2R5 256 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 DAZ1Q9NQZ3 744 aaKnown RBP6.5□□□□□ -1.37
SP140-201ENST00000343805 TRBV7-6A0A0J9YX20 115 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 H7C423 109 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 BUB3O43684 328 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 FHL2Q14192 279 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 FBXL19-AS1Q494R0 122 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 C11orf21Q9P2W6 132 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 Q9UF83 564 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 ABCA2Q9BZC7 2435 aa6.5□□□□□ -1.37
SP140-201ENST00000343805 MRPL35Q9NZE8 188 aaKnown RBP6.49□□□□□ -1.37
SP140-201ENST00000343805 MYO9AB2RTY4 2548 aa6.49□□□□□ -1.37
SP140-201ENST00000343805 TRAV12-1A0A0B4J245 112 aa6.49□□□□□ -1.37
SP140-201ENST00000343805 ZNF575Q86XF7 245 aa6.49□□□□□ -1.37
SP140-201ENST00000343805 Q8N6K4 173 aa6.49□□□□□ -1.37
SP140-201ENST00000343805 IGKV3D-20A0A0C4DH25 116 aa6.49□□□□□ -1.37
SP140-201ENST00000343805 TRBV12-3P01733 135 aa6.49□□□□□ -1.37
SP140-201ENST00000343805 IGHV3-30P01768 117 aa6.49□□□□□ -1.37
SP140-201ENST00000343805 IGHV3-30-5P0DP03 117 aa6.49□□□□□ -1.37
SP140-201ENST00000343805 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.49□□□□□ -1.37
SP140-201ENST00000343805 MRPL55Q7Z7F7 128 aaKnown RBP6.49□□□□□ -1.37
SP140-201ENST00000343805 COX6B1P14854 86 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 SPANXN1Q5VSR9 72 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 PTPN13Q12923 2485 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 C19orf84I3L1E1 186 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 M0R381 172 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 NSUN5P1Q3KNT7 163 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 MINOS1Q5TGZ0 78 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 TMEM263Q8WUH6 116 aaKnown RBP6.48□□□□□ -1.37
SP140-201ENST00000343805 RNF185Q96GF1 192 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 Q9H8V8 135 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 MINOS1-NBL1R4GNA1 71 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 LRRK2Q5S007 2527 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 ZNF462Q96JM2 2506 aa6.48□□□□□ -1.37
SP140-201ENST00000343805 ABCA12Q86UK0 2595 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms