RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 A6NJY4 79 aa10.62□□□□□ -0.71
CXCL12-201ENST00000343575 HTN1P15515 57 aa10.62□□□□□ -0.71
CXCL12-201ENST00000343575 LYRM7Q5U5X0 104 aa10.62□□□□□ -0.71
CXCL12-201ENST00000343575 MRAP2Q96G30 205 aa10.62□□□□□ -0.71
CXCL12-201ENST00000343575 C9orf85Q96MD7 179 aa10.62□□□□□ -0.71
CXCL12-201ENST00000343575 MRPL35Q9NZE8 188 aaKnown RBP10.62□□□□□ -0.71
CXCL12-201ENST00000343575 NBEAL1Q6ZS30 2694 aa10.62□□□□□ -0.71
CXCL12-201ENST00000343575 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.61□□□□□ -0.71
CXCL12-201ENST00000343575 MED14OSP0DP75 135 aa10.61□□□□□ -0.71
CXCL12-201ENST00000343575 C11orf72Q8NBR9 251 aa10.61□□□□□ -0.71
CXCL12-201ENST00000343575 DNHD1Q96M86 4753 aa10.61□□□□□ -0.71
CXCL12-201ENST00000343575 TRBV7-3A0A075B6L6 115 aa10.61□□□□□ -0.71
CXCL12-201ENST00000343575 IGHV3OR16-12A0A075B7B8 117 aa10.61□□□□□ -0.71
CXCL12-201ENST00000343575 F8VRH5 84 aa10.61□□□□□ -0.71
CXCL12-201ENST00000343575 S100A4P26447 101 aaKnown RBP10.61□□□□□ -0.71
CXCL12-201ENST00000343575 ORMDL2Q53FV1 153 aa10.61□□□□□ -0.71
CXCL12-201ENST00000343575 OR11H2Q8NH07 326 aa10.61□□□□□ -0.71
CXCL12-201ENST00000343575 C1QTNF4Q9BXJ3 329 aa10.61□□□□□ -0.71
CXCL12-201ENST00000343575 MYMXA0A1B0GTQ4 84 aa10.6□□□□□ -0.71
CXCL12-201ENST00000343575 PRO0461Q9UI25 63 aa10.6□□□□□ -0.71
CXCL12-201ENST00000343575 H3BMG7 143 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 KRTAP21-3Q3LHN1 58 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 NRACQ8N912 160 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 SVIPQ8NHG7 77 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 KIR2DL5BQ8NHK3 375 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 LINC01549A6NIU2 74 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 A8MZ25 164 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 NXPH4O95158 308 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 ETDBQ3ZM63 59 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 KPRPQ5T749 579 aaPredicted RBP10.59□□□□□ -0.71
CXCL12-201ENST00000343575 TTTY13Q9BZ97 58 aa10.59□□□□□ -0.71
CXCL12-201ENST00000343575 TRGV11A0A075B6L2 103 aa10.58□□□□□ -0.72
CXCL12-201ENST00000343575 MAPKAPK5-AS1Q8N8E1 139 aa10.58□□□□□ -0.72
CXCL12-201ENST00000343575 PLAC8L1A1L4L8 177 aa10.57□□□□□ -0.72
CXCL12-201ENST00000343575 M0R381 172 aa10.57□□□□□ -0.72
CXCL12-201ENST00000343575 PRB2P02812 416 aaPredicted RBP10.57□□□□□ -0.72
CXCL12-201ENST00000343575 C20orf78Q9BR46 151 aa10.57□□□□□ -0.72
CXCL12-201ENST00000343575 PHLDA3Q9Y5J5 127 aa10.57□□□□□ -0.72
CXCL12-201ENST00000343575 NBEAL2Q6ZNJ1 2754 aa10.57□□□□□ -0.72
CXCL12-201ENST00000343575 CKS1BP61024 79 aa10.57□□□□□ -0.72
CXCL12-201ENST00000343575 SPANXN1Q5VSR9 72 aa10.57□□□□□ -0.72
CXCL12-201ENST00000343575 IL17DQ8TAD2 202 aa10.57□□□□□ -0.72
CXCL12-201ENST00000343575 JPT2Q9H910 190 aa10.57□□□□□ -0.72
CXCL12-201ENST00000343575 MRPL16Q9NX20 251 aaKnown RBP10.57□□□□□ -0.72
CXCL12-201ENST00000343575 APOMO95445 188 aa10.56□□□□□ -0.72
CXCL12-201ENST00000343575 PPP1R17O96001 155 aa10.56□□□□□ -0.72
CXCL12-201ENST00000343575 SMIM2Q9BVW6 85 aa10.56□□□□□ -0.72
CXCL12-201ENST00000343575 CYSLTR1Q9Y271 337 aa10.56□□□□□ -0.72
CXCL12-201ENST00000343575 X6R8D5 127 aa10.56□□□□□ -0.72
CXCL12-201ENST00000343575 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
CXCL12-201ENST00000343575 APOC4P55056 127 aa10.55□□□□□ -0.72
CXCL12-201ENST00000343575 SH2D6Q7Z4S9 175 aa10.55□□□□□ -0.72
CXCL12-201ENST00000343575 TOMM6Q96B49 74 aa10.55□□□□□ -0.72
CXCL12-201ENST00000343575 GATA1P15976 413 aaPredicted RBP10.55□□□□□ -0.72
CXCL12-201ENST00000343575 FOXI1Q12951 378 aa10.55□□□□□ -0.72
CXCL12-201ENST00000343575 DEFB135Q30KP9 77 aa10.55□□□□□ -0.72
CXCL12-201ENST00000343575 PAPPA-AS1Q5QFB9 102 aa10.55□□□□□ -0.72
CXCL12-201ENST00000343575 TMEM263Q8WUH6 116 aaKnown RBP10.55□□□□□ -0.72
CXCL12-201ENST00000343575 ZNF415Q09FC8 603 aa10.54□□□□□ -0.72
CXCL12-201ENST00000343575 SCGB3A1Q96QR1 104 aa10.54□□□□□ -0.72
CXCL12-201ENST00000343575 KIF25-AS1Q9Y6Z4 181 aa10.54□□□□□ -0.72
CXCL12-201ENST00000343575 LINC00315P59091 139 aa10.53□□□□□ -0.72
CXCL12-201ENST00000343575 CFAP126Q5VTH2 177 aa10.53□□□□□ -0.72
CXCL12-201ENST00000343575 NEXN-AS1Q8NBZ9 246 aa10.53□□□□□ -0.72
CXCL12-201ENST00000343575 TRBV20-1A0A075B6N2 111 aa10.53□□□□□ -0.72
CXCL12-201ENST00000343575 K7EIL1 84 aa10.53□□□□□ -0.72
CXCL12-201ENST00000343575 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
CXCL12-201ENST00000343575 UBE2D1P51668 147 aa10.52□□□□□ -0.73
CXCL12-201ENST00000343575 C14orf178Q8N769 122 aaPredicted RBP10.52□□□□□ -0.73
CXCL12-201ENST00000343575 PGPEP1Q9NXJ5 209 aa10.52□□□□□ -0.73
CXCL12-201ENST00000343575 NACAE9PAV3 2078 aa10.52□□□□□ -0.73
CXCL12-201ENST00000343575 M0R2P5 195 aa10.51□□□□□ -0.73
CXCL12-201ENST00000343575 PTH2Q96A98 100 aa10.51□□□□□ -0.73
CXCL12-201ENST00000343575 RNF183Q96D59 192 aa10.51□□□□□ -0.73
CXCL12-201ENST00000343575 SPXQ9BT56 116 aa10.51□□□□□ -0.73
CXCL12-201ENST00000343575 CRYGDP07320 174 aa10.51□□□□□ -0.73
CXCL12-201ENST00000343575 HERVK_113P61574 105 aa10.51□□□□□ -0.73
CXCL12-201ENST00000343575 SUMO2P61956 95 aaKnown RBP10.51□□□□□ -0.73
CXCL12-201ENST00000343575 PPDPFLQ8WWR9 84 aa10.51□□□□□ -0.73
CXCL12-201ENST00000343575 RASL10AQ92737 203 aa10.51□□□□□ -0.73
CXCL12-201ENST00000343575 C16orf74Q96GX8 76 aa10.51□□□□□ -0.73
CXCL12-201ENST00000343575 CRYBA4P53673 196 aa10.5□□□□□ -0.73
CXCL12-201ENST00000343575 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
CXCL12-201ENST00000343575 A0A087WWL8 130 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 UBE2D3P61077 147 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 UBE2D2P62837 147 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 RPL32P62910 135 aaKnown RBP10.49□□□□□ -0.73
CXCL12-201ENST00000343575 PIK3CD-AS1Q5SR53 167 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 POM121L12Q8N7R1 296 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 OVOL2Q9BRP0 275 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 PRADC1Q9BSG0 188 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 DPH3P1Q9H4G8 78 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 NOP10Q9NPE3 64 aaKnown RBP10.49□□□□□ -0.73
CXCL12-201ENST00000343575 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 ZNF815PA8K554 130 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 TMEM262E9PQX1 116 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 M0QXV9 152 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 Q6ZTI0 123 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 SYT8Q8NBV8 401 aa10.49□□□□□ -0.73
CXCL12-201ENST00000343575 TRAV26-2A0A0B4J265 109 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms