RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 NMUP48645 174 aa14.26□□□□□ -0.13
RTN1-202ENST00000342503 PMVKQ15126 192 aa14.26□□□□□ -0.13
RTN1-202ENST00000342503 ZNRF2Q8NHG8 242 aa14.26□□□□□ -0.13
RTN1-202ENST00000342503 TRRAPQ9Y4A5 3859 aa14.25□□□□□ -0.13
RTN1-202ENST00000342503 BATFQ16520 125 aa14.25□□□□□ -0.13
RTN1-202ENST00000342503 KIR2DL5BQ8NHK3 375 aa14.25□□□□□ -0.13
RTN1-202ENST00000342503 IGKV2D-26A0A0A0MRZ7 120 aa14.24□□□□□ -0.13
RTN1-202ENST00000342503 APOC4P55056 127 aa14.24□□□□□ -0.13
RTN1-202ENST00000342503 SLC25A29Q8N8R3 303 aa14.24□□□□□ -0.13
RTN1-202ENST00000342503 OPRPNQ99935 248 aaPredicted RBP14.24□□□□□ -0.13
RTN1-202ENST00000342503 CHCHD7Q9BUK0 85 aa14.24□□□□□ -0.13
RTN1-202ENST00000342503 CST9LQ9H4G1 147 aa14.24□□□□□ -0.13
RTN1-202ENST00000342503 TRBV10-1A0A0K0K1A3 114 aa14.24□□□□□ -0.13
RTN1-202ENST00000342503 SMIM9A6NGZ8 99 aa14.24□□□□□ -0.13
RTN1-202ENST00000342503 BOD1L2Q8IYS8 172 aa14.24□□□□□ -0.13
RTN1-202ENST00000342503 TRBV7-3A0A075B6L6 115 aa14.23□□□□□ -0.13
RTN1-202ENST00000342503 PCP2Q8IVA1 136 aa14.23□□□□□ -0.13
RTN1-202ENST00000342503 CIDEAO60543 219 aa14.22□□□□□ -0.13
RTN1-202ENST00000342503 RPL36AP83881 106 aaKnown RBP14.22□□□□□ -0.13
RTN1-202ENST00000342503 COTL1Q14019 142 aa14.22□□□□□ -0.13
RTN1-202ENST00000342503 SHISA2Q6UWI4 295 aa14.22□□□□□ -0.13
RTN1-202ENST00000342503 C2orf91Q6ZV80 131 aa14.22□□□□□ -0.13
RTN1-202ENST00000342503 RPL36ALQ969Q0 106 aaKnown RBP14.22□□□□□ -0.13
RTN1-202ENST00000342503 IGLV4-69A0A075B6H9 119 aa14.21□□□□□ -0.13
RTN1-202ENST00000342503 DEFB135Q30KP9 77 aa14.21□□□□□ -0.13
RTN1-202ENST00000342503 C12orf54Q6X4T0 127 aa14.21□□□□□ -0.13
RTN1-202ENST00000342503 ZMAT5Q9UDW3 170 aaKnown RBP14.21□□□□□ -0.13
RTN1-202ENST00000342503 DLEU1O43261 78 aa14.21□□□□□ -0.14
RTN1-202ENST00000342503 HINT1P49773 126 aaPredicted RBP14.21□□□□□ -0.14
RTN1-202ENST00000342503 OXLD1Q5BKU9 147 aa14.21□□□□□ -0.14
RTN1-202ENST00000342503 IGLV4-3A0A075B6K6 122 aa14.2□□□□□ -0.14
RTN1-202ENST00000342503 GAGE12JA6NER3 117 aa14.2□□□□□ -0.14
RTN1-202ENST00000342503 GAGE1Q13065 139 aa14.2□□□□□ -0.14
RTN1-202ENST00000342503 GAGE4Q13068 117 aa14.2□□□□□ -0.14
RTN1-202ENST00000342503 GAGE5Q13069 117 aa14.2□□□□□ -0.14
RTN1-202ENST00000342503 GAGE13Q4V321 117 aa14.2□□□□□ -0.14
RTN1-202ENST00000342503 PYGO1Q9Y3Y4 419 aa14.2□□□□□ -0.14
RTN1-202ENST00000342503 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.19□□□□□ -0.14
RTN1-202ENST00000342503 TRGV4A0A0C4DH28 118 aa14.19□□□□□ -0.14
RTN1-202ENST00000342503 IGKV2-29A2NJV5 120 aaPredicted RBP14.19□□□□□ -0.14
RTN1-202ENST00000342503 IGHV4-30-4P0DP06 118 aa14.19□□□□□ -0.14
RTN1-202ENST00000342503 UBE2D3P61077 147 aa14.19□□□□□ -0.14
RTN1-202ENST00000342503 UBE2D2P62837 147 aa14.19□□□□□ -0.14
RTN1-202ENST00000342503 LINC00612Q8N6U2 182 aa14.19□□□□□ -0.14
RTN1-202ENST00000342503 C11orf86A6NJI1 115 aa14.18□□□□□ -0.14
RTN1-202ENST00000342503 DEFB130BP0DP73 79 aa14.18□□□□□ -0.14
RTN1-202ENST00000342503 DEFB130AP0DP74 79 aa14.18□□□□□ -0.14
RTN1-202ENST00000342503 FHL2Q14192 279 aa14.18□□□□□ -0.14
RTN1-202ENST00000342503 FBN1P35555 2871 aaKnown RBP14.18□□□□□ -0.14
RTN1-202ENST00000342503 A0A1B0GV90 55 aa14.18□□□□□ -0.14
RTN1-202ENST00000342503 TRBV6-4A0A1B0GX49 114 aa14.18□□□□□ -0.14
RTN1-202ENST00000342503 CEMP1Q6PRD7 247 aaPredicted RBP14.18□□□□□ -0.14
RTN1-202ENST00000342503 FAM104AQ969W3 186 aa14.18□□□□□ -0.14
RTN1-202ENST00000342503 TTTY13Q9BZ97 58 aa14.18□□□□□ -0.14
RTN1-202ENST00000342503 CMYA5Q8N3K9 4069 aa14.18□□□□□ -0.14
RTN1-202ENST00000342503 KRTAP10-11P60412 298 aa14.17□□□□□ -0.14
RTN1-202ENST00000342503 PAPPA-AS1Q5QFB9 102 aa14.17□□□□□ -0.14
RTN1-202ENST00000342503 DAZ4Q86SG3 579 aaKnown RBP14.17□□□□□ -0.14
RTN1-202ENST00000342503 OR11H2Q8NH07 326 aa14.17□□□□□ -0.14
RTN1-202ENST00000342503 DAZ3Q9NR90 486 aaKnown RBP14.17□□□□□ -0.14
RTN1-202ENST00000342503 UBE2D4Q9Y2X8 147 aa14.17□□□□□ -0.14
RTN1-202ENST00000342503 LOC100131303A0A0U1RQF7 123 aa14.16□□□□□ -0.14
RTN1-202ENST00000342503 MPV17L2Q567V2 206 aa14.16□□□□□ -0.14
RTN1-202ENST00000342503 VCX2Q9H322 139 aa14.16□□□□□ -0.14
RTN1-202ENST00000342503 SIVA1O15304 175 aa14.15□□□□□ -0.14
RTN1-202ENST00000342503 SPANXA1Q9NS26 97 aa14.15□□□□□ -0.14
RTN1-202ENST00000342503 NPSP0C0P6 89 aa14.14□□□□□ -0.15
RTN1-202ENST00000342503 TMEM97Q5BJF2 176 aa14.14□□□□□ -0.15
RTN1-202ENST00000342503 AMELXQ99217 191 aa14.14□□□□□ -0.15
RTN1-202ENST00000342503 COL5A1-AS1Q5SY13 56 aa14.13□□□□□ -0.15
RTN1-202ENST00000342503 FAM222AQ5U5X8 452 aa14.13□□□□□ -0.15
RTN1-202ENST00000342503 NTM-AS1Q6ZSK4 140 aa14.13□□□□□ -0.15
RTN1-202ENST00000342503 MAPKAPK5-AS1Q8N8E1 139 aa14.13□□□□□ -0.15
RTN1-202ENST00000342503 TRAV8-6A0A0B4J262 113 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 IGHV4-28A0A0C4DH34 117 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 E9PLD3 99 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 DEFB4AO15263 64 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 NFE4Q86UQ8 179 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 PRADC1Q9BSG0 188 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 LYRM9A8MSI8 78 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 CRYBA4P53673 196 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 RNASE13Q5GAN3 156 aaKnown RBP14.12□□□□□ -0.15
RTN1-202ENST00000342503 BVES-AS1Q5T3Y7 98 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 RNF183Q96D59 192 aa14.12□□□□□ -0.15
RTN1-202ENST00000342503 EGFEM1PQ0D2K5 195 aa14.11□□□□□ -0.15
RTN1-202ENST00000342503 CHAC1Q9BUX1 264 aa14.11□□□□□ -0.15
RTN1-202ENST00000342503 A0A0J9YXV3 536 aa14.1□□□□□ -0.15
RTN1-202ENST00000342503 TMEM170BQ5T4T1 132 aa14.1□□□□□ -0.15
RTN1-202ENST00000342503 Q6ZUT4 128 aa14.1□□□□□ -0.15
RTN1-202ENST00000342503 MIFP14174 115 aa14.1□□□□□ -0.15
RTN1-202ENST00000342503 SBSPONQ8IVN8 264 aa14.1□□□□□ -0.15
RTN1-202ENST00000342503 Q8NAQ8 132 aa14.1□□□□□ -0.15
RTN1-202ENST00000342503 TIMM21Q9BVV7 248 aa14.1□□□□□ -0.15
RTN1-202ENST00000342503 GTSF1LQ9H1H1 148 aa14.1□□□□□ -0.15
RTN1-202ENST00000342503 HERVK_113P61574 105 aa14.09□□□□□ -0.15
RTN1-202ENST00000342503 TRBV25-1A0A075B6N4 114 aa14.08□□□□□ -0.16
RTN1-202ENST00000342503 LINC00694P0DN24 101 aa14.08□□□□□ -0.16
RTN1-202ENST00000342503 HIGD1BQ9P298 99 aa14.08□□□□□ -0.16
RTN1-202ENST00000342503 MRPS36P82909 103 aaKnown RBP14.07□□□□□ -0.16
RTN1-202ENST00000342503 ZNF22P17026 224 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms