RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 TEN1Q86WV5 123 aa9.67□□□□□ -0.86
DNMT1-201ENST00000340748 ZFAND3Q9H8U3 227 aa9.66□□□□□ -0.86
DNMT1-201ENST00000340748 PRO0255Q9UI72 69 aa9.66□□□□□ -0.86
DNMT1-201ENST00000340748 NCOA6Q14686 2063 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-201ENST00000340748 A0A1W2PPR1 153 aa9.65□□□□□ -0.87
DNMT1-201ENST00000340748 AVPP01185 164 aa9.65□□□□□ -0.87
DNMT1-201ENST00000340748 A0A0B4J2C4 111 aa9.64□□□□□ -0.87
DNMT1-201ENST00000340748 CEP295Q9C0D2 2601 aa9.64□□□□□ -0.87
DNMT1-201ENST00000340748 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
DNMT1-201ENST00000340748 FUSP35637 526 aaKnown RBP eCLIP9.64□□□□□ -0.87
DNMT1-201ENST00000340748 YPEL4Q96NS1 127 aa9.64□□□□□ -0.87
DNMT1-201ENST00000340748 ABCA2Q9BZC7 2435 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 NAV3Q8IVL0 2385 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 FASNP49327 2511 aaKnown RBP9.63□□□□□ -0.87
DNMT1-201ENST00000340748 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 TIRAPP58753 221 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 DAND5Q8N907 189 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 DEFB105AQ8NG35 78 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 TP53TG3Q9ULZ0 132 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 C10orf99Q6UWK7 81 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 FREM1Q5H8C1 2179 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 H3BT86 120 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 U3KQK5 164 aa9.63□□□□□ -0.87
DNMT1-201ENST00000340748 DEFB114Q30KQ6 69 aa9.62□□□□□ -0.87
DNMT1-201ENST00000340748 ZNF462Q96JM2 2506 aa9.62□□□□□ -0.87
DNMT1-201ENST00000340748 hADV29S1A0JD25 119 aa9.62□□□□□ -0.87
DNMT1-201ENST00000340748 SPAG11BQ08648 103 aa9.62□□□□□ -0.87
DNMT1-201ENST00000340748 Q6ZUT4 128 aa9.62□□□□□ -0.87
DNMT1-201ENST00000340748 Q8N6K4 173 aa9.62□□□□□ -0.87
DNMT1-201ENST00000340748 H7C423 109 aa9.62□□□□□ -0.87
DNMT1-201ENST00000340748 NFE4Q86UQ8 179 aa9.62□□□□□ -0.87
DNMT1-201ENST00000340748 MIAQ16674 131 aa9.62□□□□□ -0.87
DNMT1-201ENST00000340748 NEXN-AS1Q8NBZ9 246 aa9.61□□□□□ -0.87
DNMT1-201ENST00000340748 SMIM9A6NGZ8 99 aa9.61□□□□□ -0.87
DNMT1-201ENST00000340748 JMJD7-PLA2G4BH0Y9G9 81 aa9.61□□□□□ -0.87
DNMT1-201ENST00000340748 DEFB131BA0A096LNP1 70 aa9.61□□□□□ -0.87
DNMT1-201ENST00000340748 WFDC2Q14508 124 aa9.61□□□□□ -0.87
DNMT1-201ENST00000340748 MIR7-3HGQ8N6C7 128 aa9.61□□□□□ -0.87
DNMT1-201ENST00000340748 NCR3O14931 201 aa9.6□□□□□ -0.87
DNMT1-201ENST00000340748 CRIP1P50238 77 aa9.6□□□□□ -0.87
DNMT1-201ENST00000340748 LRP4O75096 1905 aa9.6□□□□□ -0.87
DNMT1-201ENST00000340748 ANKRD11Q6UB99 2663 aaPredicted RBP9.6□□□□□ -0.87
DNMT1-201ENST00000340748 FOXI1Q12951 378 aa9.6□□□□□ -0.87
DNMT1-201ENST00000340748 TLN1Q9Y490 2541 aaKnown RBP9.6□□□□□ -0.87
DNMT1-201ENST00000340748 IGHV4-4A0A075B6R2 117 aa9.6□□□□□ -0.87
DNMT1-201ENST00000340748 LYRM9A8MSI8 78 aa9.59□□□□□ -0.87
DNMT1-201ENST00000340748 ZFAND2AQ8N6M9 145 aa9.59□□□□□ -0.87
DNMT1-201ENST00000340748 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
DNMT1-201ENST00000340748 IGLV2-11P01706 119 aa9.59□□□□□ -0.87
DNMT1-201ENST00000340748 Q6ZTI0 123 aa9.59□□□□□ -0.87
DNMT1-201ENST00000340748 MED12LQ86YW9 2145 aa9.59□□□□□ -0.87
DNMT1-201ENST00000340748 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
DNMT1-201ENST00000340748 CEMP1Q6PRD7 247 aaPredicted RBP9.58□□□□□ -0.88
DNMT1-201ENST00000340748 DIRC1Q969H9 104 aa9.58□□□□□ -0.88
DNMT1-201ENST00000340748 LECT2O14960 151 aa9.58□□□□□ -0.88
DNMT1-201ENST00000340748 P0DMU3 169 aa9.58□□□□□ -0.88
DNMT1-201ENST00000340748 FAM231AP0DMU4 169 aa9.58□□□□□ -0.88
DNMT1-201ENST00000340748 FAM231CP0DMU5 169 aa9.58□□□□□ -0.88
DNMT1-201ENST00000340748 RNF185Q96GF1 192 aa9.57□□□□□ -0.88
DNMT1-201ENST00000340748 CLEC2BQ92478 149 aa9.57□□□□□ -0.88
DNMT1-201ENST00000340748 PSMB8P28062 276 aa9.56□□□□□ -0.88
DNMT1-201ENST00000340748 PCNX3Q9H6A9 2034 aa9.56□□□□□ -0.88
DNMT1-201ENST00000340748 PLCE1Q9P212 2302 aa9.56□□□□□ -0.88
DNMT1-201ENST00000340748 TMEM256-PLSCR3K7ERE1 68 aa9.56□□□□□ -0.88
DNMT1-201ENST00000340748 TMEM223A0PJW6 202 aa9.56□□□□□ -0.88
DNMT1-201ENST00000340748 M0R2N4 97 aa9.56□□□□□ -0.88
DNMT1-201ENST00000340748 C18orf65Q6ZTR6 163 aa9.56□□□□□ -0.88
DNMT1-201ENST00000340748 TRAV10A0A0B4J240 114 aa9.55□□□□□ -0.88
DNMT1-201ENST00000340748 M0QY20 66 aa9.55□□□□□ -0.88
DNMT1-201ENST00000340748 ATOX1O00244 68 aa9.55□□□□□ -0.88
DNMT1-201ENST00000340748 LINC00467Q9BRT7 94 aa9.55□□□□□ -0.88
DNMT1-201ENST00000340748 RS1O15537 224 aa9.55□□□□□ -0.88
DNMT1-201ENST00000340748 SPANXB1Q9NS25 103 aaPredicted RBP9.55□□□□□ -0.88
DNMT1-201ENST00000340748 CFAP126Q5VTH2 177 aa9.55□□□□□ -0.88
DNMT1-201ENST00000340748 G3V4G9 280 aa9.55□□□□□ -0.88
DNMT1-201ENST00000340748 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
DNMT1-201ENST00000340748 IGLV4-3A0A075B6K6 122 aa9.54□□□□□ -0.88
DNMT1-201ENST00000340748 SRCAPQ6ZRS2 3230 aa9.54□□□□□ -0.88
DNMT1-201ENST00000340748 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
DNMT1-201ENST00000340748 NREPQ16612 68 aa9.54□□□□□ -0.88
DNMT1-201ENST00000340748 UFSP1Q6NVU6 142 aa9.54□□□□□ -0.88
DNMT1-201ENST00000340748 PDE6GP18545 87 aa9.53□□□□□ -0.88
DNMT1-201ENST00000340748 ADAMTS20P59510 1910 aa9.53□□□□□ -0.88
DNMT1-201ENST00000340748 ZNF22P17026 224 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-201ENST00000340748 IGLV2-18A0A075B6J9 118 aa9.53□□□□□ -0.88
DNMT1-201ENST00000340748 REG3AQ06141 175 aa9.53□□□□□ -0.88
DNMT1-201ENST00000340748 TCL1BO95988 128 aa9.53□□□□□ -0.88
DNMT1-201ENST00000340748 RBM3P98179 157 aaKnown RBP9.53□□□□□ -0.88
DNMT1-201ENST00000340748 FAM222AQ5U5X8 452 aa9.53□□□□□ -0.88
DNMT1-201ENST00000340748 TNRC6BQ9UPQ9 1833 aaKnown RBP9.52□□□□□ -0.88
DNMT1-201ENST00000340748 JMJD1CQ15652 2540 aa9.52□□□□□ -0.88
DNMT1-201ENST00000340748 TRAV26-1A0A087WT03 109 aa9.52□□□□□ -0.88
DNMT1-201ENST00000340748 TRBV6-4A0A1B0GX49 114 aa9.52□□□□□ -0.89
DNMT1-201ENST00000340748 MIFP14174 115 aa9.52□□□□□ -0.89
DNMT1-201ENST00000340748 PYGO1Q9Y3Y4 419 aa9.52□□□□□ -0.89
DNMT1-201ENST00000340748 GOLGB1Q14789 3259 aaKnown RBP9.52□□□□□ -0.89
DNMT1-201ENST00000340748 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
DNMT1-201ENST00000340748 IGLV1-40P01703 118 aa9.52□□□□□ -0.89
DNMT1-201ENST00000340748 Q6ZS46 218 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms