RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 RNASE8Q8TDE3 154 aaKnown RBP11.48□□□□□ -0.57
CCDC144A-202ENST00000340621 SMIM13P0DJ93 91 aa11.47□□□□□ -0.57
CCDC144A-202ENST00000340621 OR4C5Q8NGB2 326 aa11.47□□□□□ -0.57
CCDC144A-202ENST00000340621 IL17DQ8TAD2 202 aa11.47□□□□□ -0.57
CCDC144A-202ENST00000340621 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
CCDC144A-202ENST00000340621 TRGV1A0A0A0MS02 117 aa11.47□□□□□ -0.57
CCDC144A-202ENST00000340621 ZNF815PA8K554 130 aa11.47□□□□□ -0.57
CCDC144A-202ENST00000340621 FAM104AQ969W3 186 aa11.47□□□□□ -0.57
CCDC144A-202ENST00000340621 JMJD1CQ15652 2540 aa11.46□□□□□ -0.57
CCDC144A-202ENST00000340621 TAL2Q16559 108 aa11.46□□□□□ -0.57
CCDC144A-202ENST00000340621 CEMP1Q6PRD7 247 aaPredicted RBP11.46□□□□□ -0.57
CCDC144A-202ENST00000340621 VCX2Q9H322 139 aa11.46□□□□□ -0.57
CCDC144A-202ENST00000340621 K7ERJ3 54 aa11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 RPL35AP18077 110 aaKnown RBP11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 HERVK_113P61574 105 aa11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 NACAE9PAV3 2078 aa11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 IGHV3-38A0A0C4DH36 116 aa11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 PLEKHB2Q96CS7 222 aa11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 FAM110AQ9BQ89 295 aa11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 CHCHD7Q9BUK0 85 aa11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 NHP2Q9NX24 153 aaKnown RBP11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 PYGO1Q9Y3Y4 419 aa11.45□□□□□ -0.58
CCDC144A-202ENST00000340621 TRBV7-3A0A075B6L6 115 aa11.44□□□□□ -0.58
CCDC144A-202ENST00000340621 Q6ZTI0 123 aa11.44□□□□□ -0.58
CCDC144A-202ENST00000340621 PHLDA1Q8WV24 401 aaPredicted RBP11.44□□□□□ -0.58
CCDC144A-202ENST00000340621 TSPEAR-AS2P59090 65 aa11.44□□□□□ -0.58
CCDC144A-202ENST00000340621 TMEM263Q8WUH6 116 aaKnown RBP11.44□□□□□ -0.58
CCDC144A-202ENST00000340621 ZNF479Q96JC4 524 aa11.44□□□□□ -0.58
CCDC144A-202ENST00000340621 DNAJC30Q96LL9 226 aa11.44□□□□□ -0.58
CCDC144A-202ENST00000340621 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
CCDC144A-202ENST00000340621 SCGB1D4Q6XE38 83 aa11.43□□□□□ -0.58
CCDC144A-202ENST00000340621 NDUFA11Q86Y39 141 aa11.43□□□□□ -0.58
CCDC144A-202ENST00000340621 GAGE10A6NGK3 116 aa11.42□□□□□ -0.58
CCDC144A-202ENST00000340621 INAFM1C9JVW0 142 aa11.42□□□□□ -0.58
CCDC144A-202ENST00000340621 C21orf62-AS1Q17RA5 79 aa11.42□□□□□ -0.58
CCDC144A-202ENST00000340621 AMELXQ99217 191 aa11.42□□□□□ -0.58
CCDC144A-202ENST00000340621 NOP10Q9NPE3 64 aaKnown RBP11.42□□□□□ -0.58
CCDC144A-202ENST00000340621 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.41□□□□□ -0.58
CCDC144A-202ENST00000340621 IGKV2-29A2NJV5 120 aaPredicted RBP11.41□□□□□ -0.58
CCDC144A-202ENST00000340621 A0A1W2PPM0 123 aa11.41□□□□□ -0.58
CCDC144A-202ENST00000340621 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
CCDC144A-202ENST00000340621 RNASE13Q5GAN3 156 aaKnown RBP11.41□□□□□ -0.58
CCDC144A-202ENST00000340621 CSNK1G2-AS1Q8NCQ2 148 aa11.41□□□□□ -0.58
CCDC144A-202ENST00000340621 TMEM223A0PJW6 202 aa11.4□□□□□ -0.58
CCDC144A-202ENST00000340621 COTL1Q14019 142 aa11.4□□□□□ -0.58
CCDC144A-202ENST00000340621 C12orf74Q32Q52 190 aa11.4□□□□□ -0.58
CCDC144A-202ENST00000340621 SAMD5Q5TGI4 173 aa11.4□□□□□ -0.58
CCDC144A-202ENST00000340621 UBE2D4Q9Y2X8 147 aa11.4□□□□□ -0.58
CCDC144A-202ENST00000340621 PLAC8L1A1L4L8 177 aa11.4□□□□□ -0.58
CCDC144A-202ENST00000340621 J3QQQ9 107 aa11.4□□□□□ -0.58
CCDC144A-202ENST00000340621 NOTCH3Q9UM47 2321 aa11.4□□□□□ -0.58
CCDC144A-202ENST00000340621 PF4P02776 101 aa11.39□□□□□ -0.59
CCDC144A-202ENST00000340621 DAZ2Q13117 558 aaKnown RBP11.39□□□□□ -0.59
CCDC144A-202ENST00000340621 LINC00482Q8N8I6 264 aa11.39□□□□□ -0.59
CCDC144A-202ENST00000340621 A0A0J9YY99 117 aa11.39□□□□□ -0.59
CCDC144A-202ENST00000340621 CBY1Q9Y3M2 126 aa11.39□□□□□ -0.59
CCDC144A-202ENST00000340621 CRYBA4P53673 196 aa11.38□□□□□ -0.59
CCDC144A-202ENST00000340621 SRSF9Q13242 221 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC144A-202ENST00000340621 SPANXA1Q9NS26 97 aa11.38□□□□□ -0.59
CCDC144A-202ENST00000340621 VWFP04275 2813 aa11.38□□□□□ -0.59
CCDC144A-202ENST00000340621 IGHV3-64A0A075B6Q5 118 aa11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 TRAV4A0A0B4J268 109 aa11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 K7EP34 96 aa11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 GTF2H5Q6ZYL4 71 aa11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 SLC25A29Q8N8R3 303 aa11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 C16orf74Q96GX8 76 aa11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 C1QTNF4Q9BXJ3 329 aa11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 GAGE12BA1L429 117 aa11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 LEPROTO15243 131 aa11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 LGALS3P17931 250 aaKnown RBP11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 MRPS36P82909 103 aaKnown RBP11.37□□□□□ -0.59
CCDC144A-202ENST00000340621 FABP2P12104 132 aa11.36□□□□□ -0.59
CCDC144A-202ENST00000340621 SPCS1Q9Y6A9 102 aa11.36□□□□□ -0.59
CCDC144A-202ENST00000340621 IGLL5B9A064 214 aa11.36□□□□□ -0.59
CCDC144A-202ENST00000340621 K7EQD1 137 aa11.36□□□□□ -0.59
CCDC144A-202ENST00000340621 GAGE7O76087 117 aa11.36□□□□□ -0.59
CCDC144A-202ENST00000340621 GAGE12FP0CL80 117 aa11.36□□□□□ -0.59
CCDC144A-202ENST00000340621 GAGE12GP0CL81 117 aa11.36□□□□□ -0.59
CCDC144A-202ENST00000340621 GAGE12IP0CL82 117 aa11.36□□□□□ -0.59
CCDC144A-202ENST00000340621 A0A1B0GWB2 263 aa11.35□□□□□ -0.59
CCDC144A-202ENST00000340621 RRN3P1Q2M238 152 aa11.35□□□□□ -0.59
CCDC144A-202ENST00000340621 Q6ZUT4 128 aa11.35□□□□□ -0.59
CCDC144A-202ENST00000340621 SPATA3Q8NHX4 192 aa11.35□□□□□ -0.59
CCDC144A-202ENST00000340621 TRBV10-1A0A0K0K1A3 114 aa11.35□□□□□ -0.59
CCDC144A-202ENST00000340621 RPL36AP83881 106 aaKnown RBP11.35□□□□□ -0.59
CCDC144A-202ENST00000340621 OR5A1Q8NGJ0 315 aa11.35□□□□□ -0.59
CCDC144A-202ENST00000340621 RPL36ALQ969Q0 106 aaKnown RBP11.35□□□□□ -0.59
CCDC144A-202ENST00000340621 NSD1Q96L73 2696 aaPredicted RBP11.35□□□□□ -0.59
CCDC144A-202ENST00000340621 TRGV2A0A075B6R0 118 aa11.34□□□□□ -0.59
CCDC144A-202ENST00000340621 HIVEP1P15822 2718 aa11.34□□□□□ -0.59
CCDC144A-202ENST00000340621 GAGE12JA6NER3 117 aa11.33□□□□□ -0.59
CCDC144A-202ENST00000340621 GAGE4Q13068 117 aa11.33□□□□□ -0.59
CCDC144A-202ENST00000340621 GAGE5Q13069 117 aa11.33□□□□□ -0.59
CCDC144A-202ENST00000340621 GAGE13Q4V321 117 aa11.33□□□□□ -0.59
CCDC144A-202ENST00000340621 NTM-AS1Q6ZSK4 140 aa11.33□□□□□ -0.59
CCDC144A-202ENST00000340621 OVOL2Q9BRP0 275 aa11.33□□□□□ -0.59
CCDC144A-202ENST00000340621 FN1P02751 2386 aaKnown RBP11.33□□□□□ -0.6
CCDC144A-202ENST00000340621 C2CD3Q4AC94 2353 aa11.33□□□□□ -0.6
CCDC144A-202ENST00000340621 PCP4P48539 62 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms