RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 AMTNQ6UX39 209 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 PPDPFLQ8WWR9 84 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 KLLNB2CW77 178 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 IGHV4-4A0A075B6R2 117 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 TRAV8-4A0A0B4J246 113 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 PFN2P35080 140 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 FGF6P10767 208 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 C16orf74Q96GX8 76 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 SMIM9A6NGZ8 99 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 ETDBQ3ZM63 59 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 CEMP1Q6PRD7 247 aaPredicted RBP4.68□□□□□ -1.66
PRKDC-202ENST00000338368 Q6ZTI0 123 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 TMEM263Q8WUH6 116 aaKnown RBP4.68□□□□□ -1.66
PRKDC-202ENST00000338368 TRAV8-3A0A0A6YYJ7 113 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 TP73-AS1Q9UF72 201 aa4.68□□□□□ -1.66
PRKDC-202ENST00000338368 SETD2Q9BYW2 2564 aaPredicted RBP4.67□□□□□ -1.66
PRKDC-202ENST00000338368 A0A0J9YY99 117 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 NEXN-AS1Q8NBZ9 246 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 P0DMU3 169 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 FAM231AP0DMU4 169 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 FAM231CP0DMU5 169 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 NRACQ8N912 160 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 TRBV7-3A0A075B6L6 115 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 C2orf82Q6UX34 121 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 DNAH12Q6ZR08 3092 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 USP9YO00507 2555 aaPredicted RBP4.67□□□□□ -1.66
PRKDC-202ENST00000338368 SPART-AS1P0CW21 52 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 IFITM1P13164 125 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 TRBV10-1A0A0K0K1A3 114 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 CFC1BP0CG36 223 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 CFC1P0CG37 223 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 ESM1Q9NQ30 184 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 DAZ2Q13117 558 aaKnown RBP4.67□□□□□ -1.66
PRKDC-202ENST00000338368 DAZ4Q86SG3 579 aaKnown RBP4.67□□□□□ -1.66
PRKDC-202ENST00000338368 DAZ3Q9NR90 486 aaKnown RBP4.67□□□□□ -1.66
PRKDC-202ENST00000338368 Q8N976 141 aa4.67□□□□□ -1.66
PRKDC-202ENST00000338368 TRBV6-5A0A0K0K1A5 114 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 C5orf38Q86SI9 138 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 POLQO75417 2590 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 ANGP03950 147 aaKnown RBP4.66□□□□□ -1.66
PRKDC-202ENST00000338368 MUSTN1Q8IVN3 82 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 M0QY20 66 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 Q9H8V8 135 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 A4D1N5 150 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 VSIG2Q96IQ7 327 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 IGLL5B9A064 214 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 INAFM1C9JVW0 142 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 CRYGDP07320 174 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 HILS1P60008 231 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 NDUFA11Q86Y39 141 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 IGKV2D-26A0A0A0MRZ7 120 aa4.66□□□□□ -1.66
PRKDC-202ENST00000338368 POLR2KP53803 58 aaKnown RBP4.66□□□□□ -1.66
PRKDC-202ENST00000338368 PROK1P58294 105 aa4.65□□□□□ -1.66
PRKDC-202ENST00000338368 MRPL23Q16540 153 aaKnown RBP4.65□□□□□ -1.66
PRKDC-202ENST00000338368 MKI67P46013 3256 aaKnown RBP4.65□□□□□ -1.66
PRKDC-202ENST00000338368 TRBV27A0A0K0K1C4 114 aa4.65□□□□□ -1.66
PRKDC-202ENST00000338368 NKAPP1Q8N9T2 125 aa4.65□□□□□ -1.66
PRKDC-202ENST00000338368 NXPH4O95158 308 aa4.65□□□□□ -1.66
PRKDC-202ENST00000338368 SOCS3O14543 225 aa4.65□□□□□ -1.66
PRKDC-202ENST00000338368 UBE2WQ96B02 151 aa4.65□□□□□ -1.67
PRKDC-202ENST00000338368 C9orf85Q96MD7 179 aa4.65□□□□□ -1.67
PRKDC-202ENST00000338368 CXCL5P42830 114 aa4.65□□□□□ -1.67
PRKDC-202ENST00000338368 CLPSL2Q6UWE3 100 aa4.65□□□□□ -1.67
PRKDC-202ENST00000338368 COL27A1Q8IZC6 1860 aaPredicted RBP4.65□□□□□ -1.67
PRKDC-202ENST00000338368 GYPEP15421 78 aa4.65□□□□□ -1.67
PRKDC-202ENST00000338368 CEP295Q9C0D2 2601 aa4.65□□□□□ -1.67
PRKDC-202ENST00000338368 IGLV4-3A0A075B6K6 122 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 SLC25A29Q8N8R3 303 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 FLG2Q5D862 2391 aaPredicted RBP4.64□□□□□ -1.67
PRKDC-202ENST00000338368 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 SMIM20Q8N5G0 67 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 PRO0255Q9UI72 69 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 DEFB135Q30KP9 77 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 HHLA3Q9XRX5 114 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 RANBP2P49792 3224 aaKnown RBP4.64□□□□□ -1.67
PRKDC-202ENST00000338368 LY6G6DO95868 133 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 XCL1P47992 114 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 RPL32P62910 135 aaKnown RBP4.64□□□□□ -1.67
PRKDC-202ENST00000338368 Q6ZUT4 128 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 TRAV4A0A0B4J268 109 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 MAPKAPK5-AS1Q8N8E1 139 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 A0A096LNJ9 63 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 CFAP126Q5VTH2 177 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 HERV-K104P63124 156 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 ODF3L2Q3SX64 289 aa4.64□□□□□ -1.67
PRKDC-202ENST00000338368 RS1O15537 224 aa4.63□□□□□ -1.67
PRKDC-202ENST00000338368 IGHV3-30-3P0DP02 117 aa4.63□□□□□ -1.67
PRKDC-202ENST00000338368 IGHV1-58A0A0C4DH39 117 aa4.63□□□□□ -1.67
PRKDC-202ENST00000338368 DEFB4AO15263 64 aa4.63□□□□□ -1.67
PRKDC-202ENST00000338368 PRM2P04554 102 aa4.63□□□□□ -1.67
PRKDC-202ENST00000338368 PLA2G2AP14555 144 aa4.63□□□□□ -1.67
PRKDC-202ENST00000338368 SPANXB1Q9NS25 103 aaPredicted RBP4.63□□□□□ -1.67
PRKDC-202ENST00000338368 CDH23Q9H251 3354 aa4.63□□□□□ -1.67
PRKDC-202ENST00000338368 CRYBA4P53673 196 aa4.63□□□□□ -1.67
PRKDC-202ENST00000338368 PRSS47A8MTI9 375 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 C15orf53Q8NAA6 179 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 WFDC10AQ9H1F0 79 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 PYGO1Q9Y3Y4 419 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 SMR3AQ99954 134 aa4.62□□□□□ -1.67
PRKDC-202ENST00000338368 LINC00467Q9BRT7 94 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms